RNA–Protein interactions for RNA: ENST00000549672.5

ERBB3-212, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-212ENST00000549672 NISCHQ9Y2I1 1504 aa21.78■■□□□ 1.08
ERBB3-212ENST00000549672 ABCC9O60706 1549 aa20.21■□□□□ 0.83
ERBB3-212ENST00000549672 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
ERBB3-212ENST00000549672 DNAJC5BQ9UF47 199 aa19.33■□□□□ 0.68
ERBB3-212ENST00000549672 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.64
ERBB3-212ENST00000549672 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
ERBB3-212ENST00000549672 NACADO15069 1562 aa18.76■□□□□ 0.59
ERBB3-212ENST00000549672 PABPN1Q86U42 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
ERBB3-212ENST00000549672 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
ERBB3-212ENST00000549672 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
ERBB3-212ENST00000549672 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
ERBB3-212ENST00000549672 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
ERBB3-212ENST00000549672 CECR2Q9BXF3 1484 aa18.21■□□□□ 0.51
ERBB3-212ENST00000549672 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
ERBB3-212ENST00000549672 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
ERBB3-212ENST00000549672 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
ERBB3-212ENST00000549672 DNAJC5Q9H3Z4 198 aa17.99■□□□□ 0.47
ERBB3-212ENST00000549672 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
ERBB3-212ENST00000549672 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
ERBB3-212ENST00000549672 CUX2O14529 1486 aa17.55■□□□□ 0.4
ERBB3-212ENST00000549672 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
ERBB3-212ENST00000549672 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
ERBB3-212ENST00000549672 NESP48681 1621 aa17.26■□□□□ 0.35
ERBB3-212ENST00000549672 THOC2Q8NI27 1593 aaKnown RBP17.24■□□□□ 0.35
ERBB3-212ENST00000549672 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
ERBB3-212ENST00000549672 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
ERBB3-212ENST00000549672 SMARCA4P51532 1647 aa17.16■□□□□ 0.34
ERBB3-212ENST00000549672 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
ERBB3-212ENST00000549672 SMARCA2P51531 1590 aa17.14■□□□□ 0.33
ERBB3-212ENST00000549672 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
ERBB3-212ENST00000549672 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
ERBB3-212ENST00000549672 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
ERBB3-212ENST00000549672 PEG3Q9GZU2 1588 aa16.95■□□□□ 0.3
ERBB3-212ENST00000549672 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
ERBB3-212ENST00000549672 PDS5BQ9NTI5 1447 aa16.85■□□□□ 0.29
ERBB3-212ENST00000549672 WDR62O43379 1518 aa16.82■□□□□ 0.28
ERBB3-212ENST00000549672 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
ERBB3-212ENST00000549672 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
ERBB3-212ENST00000549672 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
ERBB3-212ENST00000549672 WIZO95785 1651 aa16.67■□□□□ 0.26
ERBB3-212ENST00000549672 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
ERBB3-212ENST00000549672 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
ERBB3-212ENST00000549672 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
ERBB3-212ENST00000549672 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
ERBB3-212ENST00000549672 FANCD2Q9BXW9 1451 aa16.59■□□□□ 0.25
ERBB3-212ENST00000549672 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
ERBB3-212ENST00000549672 URB2Q14146 1524 aaKnown RBP16.53■□□□□ 0.24
ERBB3-212ENST00000549672 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
ERBB3-212ENST00000549672 CFTRP13569 1480 aa16.47■□□□□ 0.23
ERBB3-212ENST00000549672 ARHGEF11O15085 1522 aa16.46■□□□□ 0.23
ERBB3-212ENST00000549672 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
ERBB3-212ENST00000549672 CHD1O14646 1710 aa16.39■□□□□ 0.21
ERBB3-212ENST00000549672 TOP2AP11388 1531 aaKnown RBP16.35■□□□□ 0.21
ERBB3-212ENST00000549672 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
ERBB3-212ENST00000549672 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
ERBB3-212ENST00000549672 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
ERBB3-212ENST00000549672 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
ERBB3-212ENST00000549672 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
ERBB3-212ENST00000549672 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
ERBB3-212ENST00000549672 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
ERBB3-212ENST00000549672 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
ERBB3-212ENST00000549672 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
ERBB3-212ENST00000549672 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.172e-8■■■■□ 20.1
ERBB3-212ENST00000549672 CCDC88BA6NC98 1476 aa16.13■□□□□ 0.17
ERBB3-212ENST00000549672 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
ERBB3-212ENST00000549672 CLASP1Q7Z460 1538 aa16.08■□□□□ 0.16
ERBB3-212ENST00000549672 FBLN2P98095 1184 aa16.05■□□□□ 0.16
ERBB3-212ENST00000549672 POLA1P09884 1462 aaPredicted RBP16.04■□□□□ 0.16
ERBB3-212ENST00000549672 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
ERBB3-212ENST00000549672 RAD54L2Q9Y4B4 1467 aa16■□□□□ 0.15
ERBB3-212ENST00000549672 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
ERBB3-212ENST00000549672 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
ERBB3-212ENST00000549672 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
ERBB3-212ENST00000549672 PBRM1Q86U86 1689 aa15.94■□□□□ 0.14
ERBB3-212ENST00000549672 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
ERBB3-212ENST00000549672 SOGA1O94964 1423 aa15.89■□□□□ 0.13
ERBB3-212ENST00000549672 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
ERBB3-212ENST00000549672 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.13
ERBB3-212ENST00000549672 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
ERBB3-212ENST00000549672 KIF13AQ9H1H9 1805 aa15.85■□□□□ 0.13
ERBB3-212ENST00000549672 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
ERBB3-212ENST00000549672 CUX1P39880 1505 aa15.84■□□□□ 0.13
ERBB3-212ENST00000549672 ERCC6L2Q5T890 1561 aa15.83■□□□□ 0.13
ERBB3-212ENST00000549672 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
ERBB3-212ENST00000549672 GRIN2BQ13224 1484 aa15.83■□□□□ 0.12
ERBB3-212ENST00000549672 ABCA5Q8WWZ7 1642 aa15.77■□□□□ 0.12
ERBB3-212ENST00000549672 CEP170Q5SW79 1584 aa15.71■□□□□ 0.11
ERBB3-212ENST00000549672 SHROOM2Q13796 1616 aa15.69■□□□□ 0.1
ERBB3-212ENST00000549672 ADAMTS12P58397 1594 aa15.67■□□□□ 0.1
ERBB3-212ENST00000549672 GRIN2AQ12879 1464 aa15.66■□□□□ 0.1
ERBB3-212ENST00000549672 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
ERBB3-212ENST00000549672 NUP160Q12769 1436 aa15.61■□□□□ 0.09
ERBB3-212ENST00000549672 TSPOAP1O95153 1857 aa15.58■□□□□ 0.08
ERBB3-212ENST00000549672 DIP2BQ9P265 1576 aa15.54■□□□□ 0.08
ERBB3-212ENST00000549672 BIVM-ERCC5R4GMW8 1640 aa15.51■□□□□ 0.07
ERBB3-212ENST00000549672 KDM6BO15054 1643 aa15.5■□□□□ 0.07
ERBB3-212ENST00000549672 ABCC10Q5T3U5 1492 aa15.49■□□□□ 0.07
ERBB3-212ENST00000549672 ADCY10Q96PN6 1610 aa15.49■□□□□ 0.07
ERBB3-212ENST00000549672 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
ERBB3-212ENST00000549672 PRG4Q92954 1404 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms