RNA–Protein interactions for RNA: ENST00000549638.1

KRT7-208, Transcript of keratin 7, humanhuman

TSL 2

Gene KRT7, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT7-208ENST00000549638 NISCHQ9Y2I1 1504 aa32.64■■■□□ 2.82
KRT7-208ENST00000549638 ABCC9O60706 1549 aa29.74■■■□□ 2.35
KRT7-208ENST00000549638 CCDC180Q9P1Z9 1646 aa29.47■■■□□ 2.31
KRT7-208ENST00000549638 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
KRT7-208ENST00000549638 DNAJC5BQ9UF47 199 aa28.2■■■□□ 2.1
KRT7-208ENST00000549638 NACADO15069 1562 aa28■■■□□ 2.07
KRT7-208ENST00000549638 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
KRT7-208ENST00000549638 PABPN1Q86U42 306 aaKnown RBP eCLIP27.62■■■□□ 2.01
KRT7-208ENST00000549638 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
KRT7-208ENST00000549638 UNC13AQ9UPW8 1703 aa27.44■■□□□ 1.98
KRT7-208ENST00000549638 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
KRT7-208ENST00000549638 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
KRT7-208ENST00000549638 DCAF1Q9Y4B6 1507 aa27.04■■□□□ 1.92
KRT7-208ENST00000549638 ZCCHC6Q5VYS8 1495 aaKnown RBP26.96■■□□□ 1.91
KRT7-208ENST00000549638 CECR2Q9BXF3 1484 aa26.89■■□□□ 1.9
KRT7-208ENST00000549638 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
KRT7-208ENST00000549638 EIF4G1Q04637 1599 aaKnown RBP26.75■■□□□ 1.87
KRT7-208ENST00000549638 SCRIBQ14160 1630 aa26.71■■□□□ 1.87
KRT7-208ENST00000549638 DNAJC5Q9H3Z4 198 aa26.33■■□□□ 1.81
KRT7-208ENST00000549638 CUX2O14529 1486 aa25.93■■□□□ 1.74
KRT7-208ENST00000549638 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
KRT7-208ENST00000549638 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
KRT7-208ENST00000549638 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
KRT7-208ENST00000549638 SMARCA2P51531 1590 aa25.63■■□□□ 1.69
KRT7-208ENST00000549638 HMGXB3Q12766 1538 aa25.61■■□□□ 1.69
KRT7-208ENST00000549638 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
KRT7-208ENST00000549638 NESP48681 1621 aa25.41■■□□□ 1.66
KRT7-208ENST00000549638 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
KRT7-208ENST00000549638 BAZ1AQ9NRL2 1556 aaPredicted RBP25.4■■□□□ 1.66
KRT7-208ENST00000549638 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
KRT7-208ENST00000549638 LAMC3Q9Y6N6 1575 aa25.32■■□□□ 1.64
KRT7-208ENST00000549638 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
KRT7-208ENST00000549638 PDS5BQ9NTI5 1447 aa25.23■■□□□ 1.63
KRT7-208ENST00000549638 MROH2BQ7Z745 1585 aa25.07■■□□□ 1.6
KRT7-208ENST00000549638 KIF21AQ7Z4S6 1674 aa25.06■■□□□ 1.6
KRT7-208ENST00000549638 CADPSQ9ULU8 1353 aa25.05■■□□□ 1.6
KRT7-208ENST00000549638 MRC2Q9UBG0 1479 aa24.96■■□□□ 1.59
KRT7-208ENST00000549638 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
KRT7-208ENST00000549638 WDR62O43379 1518 aa24.9■■□□□ 1.58
KRT7-208ENST00000549638 CEP164Q9UPV0 1460 aa24.79■■□□□ 1.56
KRT7-208ENST00000549638 WIZO95785 1651 aa24.72■■□□□ 1.55
KRT7-208ENST00000549638 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
KRT7-208ENST00000549638 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
KRT7-208ENST00000549638 CFTRP13569 1480 aa24.66■■□□□ 1.54
KRT7-208ENST00000549638 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
KRT7-208ENST00000549638 TOP2AP11388 1531 aaKnown RBP24.47■■□□□ 1.51
KRT7-208ENST00000549638 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
KRT7-208ENST00000549638 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
KRT7-208ENST00000549638 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
KRT7-208ENST00000549638 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
KRT7-208ENST00000549638 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
KRT7-208ENST00000549638 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
KRT7-208ENST00000549638 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
KRT7-208ENST00000549638 ZNF608Q9ULD9 1512 aaPredicted RBP24.21■■□□□ 1.47
KRT7-208ENST00000549638 ARHGEF11O15085 1522 aa24.2■■□□□ 1.47
KRT7-208ENST00000549638 TOPBP1Q92547 1522 aa24.18■■□□□ 1.46
KRT7-208ENST00000549638 CCDC88BA6NC98 1476 aa24.18■■□□□ 1.46
KRT7-208ENST00000549638 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.44
KRT7-208ENST00000549638 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.44
KRT7-208ENST00000549638 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
KRT7-208ENST00000549638 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.43
KRT7-208ENST00000549638 TARBP1Q13395 1621 aaKnown RBP23.98■■□□□ 1.43
KRT7-208ENST00000549638 TRHP20396 242 aaPredicted RBP23.94■■□□□ 1.42
KRT7-208ENST00000549638 FBLN2P98095 1184 aa23.93■■□□□ 1.42
KRT7-208ENST00000549638 CHD1O14646 1710 aa23.93■■□□□ 1.42
KRT7-208ENST00000549638 ARAP1Q96P48 1450 aa23.92■■□□□ 1.42
KRT7-208ENST00000549638 POLA1P09884 1462 aaPredicted RBP23.91■■□□□ 1.42
KRT7-208ENST00000549638 WDR97A6NE52 1622 aa23.85■■□□□ 1.41
KRT7-208ENST00000549638 SOGA1O94964 1423 aa23.84■■□□□ 1.41
KRT7-208ENST00000549638 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
KRT7-208ENST00000549638 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
KRT7-208ENST00000549638 CHMP7Q8WUX9 453 aaPredicted RBP23.76■■□□□ 1.39
KRT7-208ENST00000549638 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
KRT7-208ENST00000549638 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
KRT7-208ENST00000549638 SNAPC4Q5SXM2 1469 aa23.73■■□□□ 1.39
KRT7-208ENST00000549638 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
KRT7-208ENST00000549638 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
KRT7-208ENST00000549638 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
KRT7-208ENST00000549638 SYNJ2O15056 1496 aa23.65■■□□□ 1.38
KRT7-208ENST00000549638 CUX1P39880 1505 aa23.59■■□□□ 1.37
KRT7-208ENST00000549638 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
KRT7-208ENST00000549638 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
KRT7-208ENST00000549638 ABCA10Q8WWZ4 1543 aa23.46■■□□□ 1.35
KRT7-208ENST00000549638 PBRM1Q86U86 1689 aa23.45■■□□□ 1.34
KRT7-208ENST00000549638 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.33
KRT7-208ENST00000549638 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
KRT7-208ENST00000549638 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
KRT7-208ENST00000549638 NUP160Q12769 1436 aa23.31■■□□□ 1.32
KRT7-208ENST00000549638 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
KRT7-208ENST00000549638 CEP170Q5SW79 1584 aa23.25■■□□□ 1.31
KRT7-208ENST00000549638 ADAMTS12P58397 1594 aa23.24■■□□□ 1.31
KRT7-208ENST00000549638 ERCC6L2Q5T890 1561 aa23.21■■□□□ 1.31
KRT7-208ENST00000549638 SHROOM2Q13796 1616 aa23.21■■□□□ 1.31
KRT7-208ENST00000549638 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
KRT7-208ENST00000549638 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
KRT7-208ENST00000549638 BIVM-ERCC5R4GMW8 1640 aa23.14■■□□□ 1.29
KRT7-208ENST00000549638 JPH4Q96JJ6 628 aa23.1■■□□□ 1.29
KRT7-208ENST00000549638 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
KRT7-208ENST00000549638 NPM1P06748 294 aaKnown RBP eCLIP23.06■■□□□ 1.28
KRT7-208ENST00000549638 SUPT5HO00267 1087 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms