RNA–Protein interactions for RNA: ENST00000549500.1

PCED1B-204, Transcript of PC-esterase domain containing 1B, humanhuman

TSL 3

Gene PCED1B, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-204ENST00000549500 NISCHQ9Y2I1 1504 aa32.57■■■□□ 2.8
PCED1B-204ENST00000549500 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
PCED1B-204ENST00000549500 ABCC9O60706 1549 aa28.9■■■□□ 2.22
PCED1B-204ENST00000549500 RB1CC1Q8TDY2 1594 aa27.57■■■□□ 2
PCED1B-204ENST00000549500 NACADO15069 1562 aa27.45■■□□□ 1.99
PCED1B-204ENST00000549500 DCAF8L2P0C7V8 631 aa27.3■■□□□ 1.96
PCED1B-204ENST00000549500 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
PCED1B-204ENST00000549500 UNC13AQ9UPW8 1703 aa27.06■■□□□ 1.92
PCED1B-204ENST00000549500 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
PCED1B-204ENST00000549500 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
PCED1B-204ENST00000549500 PABPN1Q86U42 306 aaKnown RBP eCLIP26.94■■□□□ 1.9
PCED1B-204ENST00000549500 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
PCED1B-204ENST00000549500 BICRAQ9NZM4 1560 aa26.86■■□□□ 1.89
PCED1B-204ENST00000549500 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
PCED1B-204ENST00000549500 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
PCED1B-204ENST00000549500 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
PCED1B-204ENST00000549500 CC2D2AQ9P2K1 1620 aa26.13■■□□□ 1.77
PCED1B-204ENST00000549500 CECR2Q9BXF3 1484 aa25.99■■□□□ 1.75
PCED1B-204ENST00000549500 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
PCED1B-204ENST00000549500 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
PCED1B-204ENST00000549500 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
PCED1B-204ENST00000549500 BAZ1AQ9NRL2 1556 aaPredicted RBP25.23■■□□□ 1.63
PCED1B-204ENST00000549500 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
PCED1B-204ENST00000549500 HMGXB3Q12766 1538 aa25.19■■□□□ 1.62
PCED1B-204ENST00000549500 MROH2BQ7Z745 1585 aa25.13■■□□□ 1.61
PCED1B-204ENST00000549500 PEG3Q9GZU2 1588 aa25.12■■□□□ 1.61
PCED1B-204ENST00000549500 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
PCED1B-204ENST00000549500 NESP48681 1621 aa24.94■■□□□ 1.58
PCED1B-204ENST00000549500 ERCC6Q03468 1493 aa24.88■■□□□ 1.57
PCED1B-204ENST00000549500 WIZO95785 1651 aa24.84■■□□□ 1.57
PCED1B-204ENST00000549500 CUX2O14529 1486 aa24.77■■□□□ 1.56
PCED1B-204ENST00000549500 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
PCED1B-204ENST00000549500 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
PCED1B-204ENST00000549500 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
PCED1B-204ENST00000549500 THOC2Q8NI27 1593 aaKnown RBP24.63■■□□□ 1.53
PCED1B-204ENST00000549500 KIF21AQ7Z4S6 1674 aa24.62■■□□□ 1.53
PCED1B-204ENST00000549500 CADPSQ9ULU8 1353 aa24.58■■□□□ 1.53
PCED1B-204ENST00000549500 PDS5BQ9NTI5 1447 aa24.54■■□□□ 1.52
PCED1B-204ENST00000549500 DNAJC5Q9H3Z4 198 aa24.51■■□□□ 1.51
PCED1B-204ENST00000549500 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
PCED1B-204ENST00000549500 CFTRP13569 1480 aa24.38■■□□□ 1.49
PCED1B-204ENST00000549500 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
PCED1B-204ENST00000549500 WDR62O43379 1518 aa24.32■■□□□ 1.48
PCED1B-204ENST00000549500 FANCD2Q9BXW9 1451 aa24.31■■□□□ 1.48
PCED1B-204ENST00000549500 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
PCED1B-204ENST00000549500 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
PCED1B-204ENST00000549500 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
PCED1B-204ENST00000549500 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.45
PCED1B-204ENST00000549500 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
PCED1B-204ENST00000549500 TOPBP1Q92547 1522 aa23.89■■□□□ 1.42
PCED1B-204ENST00000549500 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
PCED1B-204ENST00000549500 ZNF608Q9ULD9 1512 aaPredicted RBP23.81■■□□□ 1.4
PCED1B-204ENST00000549500 IFT140Q96RY7 1462 aa23.8■■□□□ 1.4
PCED1B-204ENST00000549500 ABCC8Q09428 1581 aa23.78■■□□□ 1.4
PCED1B-204ENST00000549500 TARBP1Q13395 1621 aaKnown RBP23.7■■□□□ 1.38
PCED1B-204ENST00000549500 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
PCED1B-204ENST00000549500 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
PCED1B-204ENST00000549500 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
PCED1B-204ENST00000549500 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
PCED1B-204ENST00000549500 AQRO60306 1485 aaKnown RBP eCLIP23.6■■□□□ 1.37
PCED1B-204ENST00000549500 CUX1P39880 1505 aa23.59■■□□□ 1.37
PCED1B-204ENST00000549500 RAD54L2Q9Y4B4 1467 aa23.59■■□□□ 1.37
PCED1B-204ENST00000549500 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
PCED1B-204ENST00000549500 SOGA1O94964 1423 aa23.52■■□□□ 1.36
PCED1B-204ENST00000549500 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
PCED1B-204ENST00000549500 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
PCED1B-204ENST00000549500 CHD1O14646 1710 aa23.46■■□□□ 1.35
PCED1B-204ENST00000549500 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
PCED1B-204ENST00000549500 RIMBP3CA6NJZ7 1639 aa23.4■■□□□ 1.34
PCED1B-204ENST00000549500 RIMBP3BA6NNM3 1639 aa23.4■■□□□ 1.34
PCED1B-204ENST00000549500 RIMBP3Q9UFD9 1639 aa23.4■■□□□ 1.34
PCED1B-204ENST00000549500 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
PCED1B-204ENST00000549500 ARHGEF11O15085 1522 aa23.34■■□□□ 1.33
PCED1B-204ENST00000549500 FBLN2P98095 1184 aa23.32■■□□□ 1.32
PCED1B-204ENST00000549500 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
PCED1B-204ENST00000549500 ABCA10Q8WWZ4 1543 aa23.29■■□□□ 1.32
PCED1B-204ENST00000549500 MAGI1Q96QZ7 1491 aaPredicted RBP23.27■■□□□ 1.32
PCED1B-204ENST00000549500 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
PCED1B-204ENST00000549500 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
PCED1B-204ENST00000549500 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
PCED1B-204ENST00000549500 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
PCED1B-204ENST00000549500 GAPVD1Q14C86 1478 aa23.25■■□□□ 1.31
PCED1B-204ENST00000549500 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
PCED1B-204ENST00000549500 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
PCED1B-204ENST00000549500 CLASP1Q7Z460 1538 aa23.2■■□□□ 1.3
PCED1B-204ENST00000549500 SYNJ2O15056 1496 aa23.2■■□□□ 1.3
PCED1B-204ENST00000549500 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
PCED1B-204ENST00000549500 ARAP1Q96P48 1450 aa23.15■■□□□ 1.3
PCED1B-204ENST00000549500 CYB5RLQ6IPT4 315 aa23.11■■□□□ 1.29
PCED1B-204ENST00000549500 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
PCED1B-204ENST00000549500 GRIN2AQ12879 1464 aa23.02■■□□□ 1.28
PCED1B-204ENST00000549500 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
PCED1B-204ENST00000549500 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
PCED1B-204ENST00000549500 FHAD1B1AJZ9 1412 aa22.96■■□□□ 1.27
PCED1B-204ENST00000549500 NUP160Q12769 1436 aa22.95■■□□□ 1.26
PCED1B-204ENST00000549500 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.26
PCED1B-204ENST00000549500 SHROOM2Q13796 1616 aa22.84■■□□□ 1.25
PCED1B-204ENST00000549500 IGF1RP08069 1367 aa22.77■■□□□ 1.24
PCED1B-204ENST00000549500 KIF27Q86VH2 1401 aa22.74■■□□□ 1.23
PCED1B-204ENST00000549500 RUSC2Q8N2Y8 1516 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 333.4 ms