RNA–Protein interactions for RNA: ENST00000549469.1

HOXD10-203, Transcript of homeobox D10, humanhuman

TSL 2

Gene HOXD10, Length 906 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10-203ENST00000549469 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
HOXD10-203ENST00000549469 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
HOXD10-203ENST00000549469 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
HOXD10-203ENST00000549469 ABCC9O60706 1549 aa23.49■■□□□ 1.35
HOXD10-203ENST00000549469 CCDC180Q9P1Z9 1646 aa22.77■■□□□ 1.24
HOXD10-203ENST00000549469 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
HOXD10-203ENST00000549469 PHF23Q9BUL5 403 aaPredicted RBP22.09■■□□□ 1.13
HOXD10-203ENST00000549469 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
HOXD10-203ENST00000549469 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.1
HOXD10-203ENST00000549469 PABPN1Q86U42 306 aaKnown RBP eCLIP21.86■■□□□ 1.09
HOXD10-203ENST00000549469 NACADO15069 1562 aa21.66■■□□□ 1.06
HOXD10-203ENST00000549469 DCAF8L2P0C7V8 631 aa21.63■■□□□ 1.05
HOXD10-203ENST00000549469 UNC13AQ9UPW8 1703 aa21.6■■□□□ 1.05
HOXD10-203ENST00000549469 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
HOXD10-203ENST00000549469 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
HOXD10-203ENST00000549469 CC2D2AQ9P2K1 1620 aa21.14■□□□□ 0.97
HOXD10-203ENST00000549469 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.97
HOXD10-203ENST00000549469 DNAJC5Q9H3Z4 198 aa20.97■□□□□ 0.95
HOXD10-203ENST00000549469 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
HOXD10-203ENST00000549469 SCRIBQ14160 1630 aa20.89■□□□□ 0.93
HOXD10-203ENST00000549469 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
HOXD10-203ENST00000549469 ZCCHC6Q5VYS8 1495 aaKnown RBP20.82■□□□□ 0.92
HOXD10-203ENST00000549469 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
HOXD10-203ENST00000549469 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
HOXD10-203ENST00000549469 FOXD1Q16676 465 aa20.29■□□□□ 0.84
HOXD10-203ENST00000549469 CUX2O14529 1486 aa20.27■□□□□ 0.84
HOXD10-203ENST00000549469 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
HOXD10-203ENST00000549469 NESP48681 1621 aa20.09■□□□□ 0.81
HOXD10-203ENST00000549469 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
HOXD10-203ENST00000549469 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
HOXD10-203ENST00000549469 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
HOXD10-203ENST00000549469 THOC2Q8NI27 1593 aaKnown RBP19.88■□□□□ 0.77
HOXD10-203ENST00000549469 HMGXB3Q12766 1538 aa19.82■□□□□ 0.76
HOXD10-203ENST00000549469 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
HOXD10-203ENST00000549469 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
HOXD10-203ENST00000549469 KIF21AQ7Z4S6 1674 aa19.72■□□□□ 0.75
HOXD10-203ENST00000549469 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
HOXD10-203ENST00000549469 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
HOXD10-203ENST00000549469 PEG3Q9GZU2 1588 aa19.57■□□□□ 0.72
HOXD10-203ENST00000549469 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
HOXD10-203ENST00000549469 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
HOXD10-203ENST00000549469 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
HOXD10-203ENST00000549469 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
HOXD10-203ENST00000549469 ADRA2BP18089 450 aa19.47■□□□□ 0.71
HOXD10-203ENST00000549469 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
HOXD10-203ENST00000549469 WDR62O43379 1518 aa19.45■□□□□ 0.7
HOXD10-203ENST00000549469 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
HOXD10-203ENST00000549469 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
HOXD10-203ENST00000549469 WIZO95785 1651 aa19.29■□□□□ 0.68
HOXD10-203ENST00000549469 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.67
HOXD10-203ENST00000549469 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
HOXD10-203ENST00000549469 RIMBP3CA6NJZ7 1639 aa19.2■□□□□ 0.66
HOXD10-203ENST00000549469 RIMBP3BA6NNM3 1639 aa19.2■□□□□ 0.66
HOXD10-203ENST00000549469 RIMBP3Q9UFD9 1639 aa19.2■□□□□ 0.66
HOXD10-203ENST00000549469 URB2Q14146 1524 aaKnown RBP19.19■□□□□ 0.66
HOXD10-203ENST00000549469 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
HOXD10-203ENST00000549469 CFTRP13569 1480 aa19.12■□□□□ 0.65
HOXD10-203ENST00000549469 ZNF608Q9ULD9 1512 aaPredicted RBP19.08■□□□□ 0.64
HOXD10-203ENST00000549469 ARHGEF11O15085 1522 aa19.07■□□□□ 0.64
HOXD10-203ENST00000549469 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
HOXD10-203ENST00000549469 RSF1Q96T23 1441 aaPredicted RBP18.92■□□□□ 0.62
HOXD10-203ENST00000549469 TRHP20396 242 aaPredicted RBP18.91■□□□□ 0.62
HOXD10-203ENST00000549469 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
HOXD10-203ENST00000549469 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
HOXD10-203ENST00000549469 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
HOXD10-203ENST00000549469 EIF4G3O43432 1585 aaKnown RBP18.85■□□□□ 0.61
HOXD10-203ENST00000549469 MSH5O43196 834 aa18.84■□□□□ 0.61
HOXD10-203ENST00000549469 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
HOXD10-203ENST00000549469 CHD1O14646 1710 aa18.82■□□□□ 0.6
HOXD10-203ENST00000549469 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.6
HOXD10-203ENST00000549469 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
HOXD10-203ENST00000549469 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.59
HOXD10-203ENST00000549469 FBLN2P98095 1184 aa18.74■□□□□ 0.59
HOXD10-203ENST00000549469 TARBP1Q13395 1621 aaKnown RBP18.72■□□□□ 0.59
HOXD10-203ENST00000549469 DNMBPQ6XZF7 1577 aa18.67■□□□□ 0.58
HOXD10-203ENST00000549469 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
HOXD10-203ENST00000549469 POLA1P09884 1462 aaPredicted RBP18.63■□□□□ 0.57
HOXD10-203ENST00000549469 TDRD9Q8NDG6 1382 aaKnown RBP18.61■□□□□ 0.57
HOXD10-203ENST00000549469 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
HOXD10-203ENST00000549469 CLASP1Q7Z460 1538 aa18.58■□□□□ 0.56
HOXD10-203ENST00000549469 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
HOXD10-203ENST00000549469 SOGA1O94964 1423 aa18.49■□□□□ 0.55
HOXD10-203ENST00000549469 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
HOXD10-203ENST00000549469 FGD5Q6ZNL6 1462 aa18.44■□□□□ 0.54
HOXD10-203ENST00000549469 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
HOXD10-203ENST00000549469 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
HOXD10-203ENST00000549469 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
HOXD10-203ENST00000549469 CUX1P39880 1505 aa18.38■□□□□ 0.53
HOXD10-203ENST00000549469 MAGI1Q96QZ7 1491 aaPredicted RBP18.37■□□□□ 0.53
HOXD10-203ENST00000549469 SYNJ2O15056 1496 aa18.36■□□□□ 0.53
HOXD10-203ENST00000549469 GRIN2BQ13224 1484 aa18.35■□□□□ 0.53
HOXD10-203ENST00000549469 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
HOXD10-203ENST00000549469 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
HOXD10-203ENST00000549469 ABCA5Q8WWZ7 1642 aa18.19■□□□□ 0.5
HOXD10-203ENST00000549469 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
HOXD10-203ENST00000549469 KIF13AQ9H1H9 1805 aa18.18■□□□□ 0.5
HOXD10-203ENST00000549469 GRIN2AQ12879 1464 aa18.15■□□□□ 0.5
HOXD10-203ENST00000549469 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
HOXD10-203ENST00000549469 NUP160Q12769 1436 aa18.12■□□□□ 0.49
HOXD10-203ENST00000549469 SHROOM2Q13796 1616 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms