RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
ERBB3-208ENST00000549205 CCDC180Q9P1Z9 1646 aa25.3■■□□□ 1.64
ERBB3-208ENST00000549205 ABCC9O60706 1549 aa24.12■■□□□ 1.45
ERBB3-208ENST00000549205 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
ERBB3-208ENST00000549205 DCAF1Q9Y4B6 1507 aa23.77■■□□□ 1.4
ERBB3-208ENST00000549205 DCAF8L2P0C7V8 631 aa23.66■■□□□ 1.38
ERBB3-208ENST00000549205 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.38
ERBB3-208ENST00000549205 NACADO15069 1562 aa23.6■■□□□ 1.37
ERBB3-208ENST00000549205 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
ERBB3-208ENST00000549205 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
ERBB3-208ENST00000549205 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.29
ERBB3-208ENST00000549205 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
ERBB3-208ENST00000549205 BICRAQ9NZM4 1560 aa22.78■■□□□ 1.24
ERBB3-208ENST00000549205 PABPN1Q86U42 306 aaKnown RBP eCLIP22.62■■□□□ 1.21
ERBB3-208ENST00000549205 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
ERBB3-208ENST00000549205 BAZ1AQ9NRL2 1556 aaPredicted RBP22.2■■□□□ 1.14
ERBB3-208ENST00000549205 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
ERBB3-208ENST00000549205 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
ERBB3-208ENST00000549205 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
ERBB3-208ENST00000549205 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
ERBB3-208ENST00000549205 WIZO95785 1651 aa21.94■■□□□ 1.1
ERBB3-208ENST00000549205 PEG3Q9GZU2 1588 aa21.93■■□□□ 1.1
ERBB3-208ENST00000549205 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
ERBB3-208ENST00000549205 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
ERBB3-208ENST00000549205 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
ERBB3-208ENST00000549205 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
ERBB3-208ENST00000549205 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
ERBB3-208ENST00000549205 HMGXB3Q12766 1538 aa21.73■■□□□ 1.07
ERBB3-208ENST00000549205 TOP2AP11388 1531 aaKnown RBP21.72■■□□□ 1.07
ERBB3-208ENST00000549205 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
ERBB3-208ENST00000549205 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
ERBB3-208ENST00000549205 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.02
ERBB3-208ENST00000549205 PRDM2Q13029 1718 aa21.18■□□□□ 0.98
ERBB3-208ENST00000549205 CFTRP13569 1480 aa21.14■□□□□ 0.98
ERBB3-208ENST00000549205 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
ERBB3-208ENST00000549205 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
ERBB3-208ENST00000549205 NESP48681 1621 aa21.06■□□□□ 0.96
ERBB3-208ENST00000549205 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
ERBB3-208ENST00000549205 PDS5BQ9NTI5 1447 aa20.91■□□□□ 0.94
ERBB3-208ENST00000549205 KIF21AQ7Z4S6 1674 aa20.9■□□□□ 0.94
ERBB3-208ENST00000549205 ABCC8Q09428 1581 aa20.86■□□□□ 0.93
ERBB3-208ENST00000549205 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
ERBB3-208ENST00000549205 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
ERBB3-208ENST00000549205 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
ERBB3-208ENST00000549205 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
ERBB3-208ENST00000549205 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
ERBB3-208ENST00000549205 BIVM-ERCC5R4GMW8 1640 aa20.73■□□□□ 0.91
ERBB3-208ENST00000549205 CUX1P39880 1505 aa20.72■□□□□ 0.91
ERBB3-208ENST00000549205 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
ERBB3-208ENST00000549205 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
ERBB3-208ENST00000549205 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
ERBB3-208ENST00000549205 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
ERBB3-208ENST00000549205 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
ERBB3-208ENST00000549205 THOC2Q8NI27 1593 aaKnown RBP20.65■□□□□ 0.9
ERBB3-208ENST00000549205 TOPBP1Q92547 1522 aa20.65■□□□□ 0.9
ERBB3-208ENST00000549205 WDR62O43379 1518 aa20.61■□□□□ 0.89
ERBB3-208ENST00000549205 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
ERBB3-208ENST00000549205 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
ERBB3-208ENST00000549205 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
ERBB3-208ENST00000549205 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
ERBB3-208ENST00000549205 SOGA1O94964 1423 aa20.41■□□□□ 0.86
ERBB3-208ENST00000549205 CUX2O14529 1486 aa20.41■□□□□ 0.86
ERBB3-208ENST00000549205 RAD54L2Q9Y4B4 1467 aa20.4■□□□□ 0.86
ERBB3-208ENST00000549205 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
ERBB3-208ENST00000549205 IFT140Q96RY7 1462 aa20.37■□□□□ 0.85
ERBB3-208ENST00000549205 EEA1Q15075 1411 aa20.3■□□□□ 0.84
ERBB3-208ENST00000549205 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
ERBB3-208ENST00000549205 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
ERBB3-208ENST00000549205 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.84
ERBB3-208ENST00000549205 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
ERBB3-208ENST00000549205 TDRD9Q8NDG6 1382 aaKnown RBP20.22■□□□□ 0.83
ERBB3-208ENST00000549205 FAM9AQ8IZU1 332 aaPredicted RBP20.22■□□□□ 0.83
ERBB3-208ENST00000549205 PBRM1Q86U86 1689 aa20.21■□□□□ 0.83
ERBB3-208ENST00000549205 EIF4G3O43432 1585 aaKnown RBP20.21■□□□□ 0.83
ERBB3-208ENST00000549205 GAPVD1Q14C86 1478 aa20.2■□□□□ 0.82
ERBB3-208ENST00000549205 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.825e-7■■■■□ 25.9
ERBB3-208ENST00000549205 CSRNP3Q8WYN3 585 aa20.16■□□□□ 0.82
ERBB3-208ENST00000549205 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
ERBB3-208ENST00000549205 IGF1RP08069 1367 aa20.13■□□□□ 0.81
ERBB3-208ENST00000549205 CUL7Q14999 1698 aa20.12■□□□□ 0.81
ERBB3-208ENST00000549205 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
ERBB3-208ENST00000549205 KIF21BO75037 1637 aa20.09■□□□□ 0.81
ERBB3-208ENST00000549205 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
ERBB3-208ENST00000549205 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
ERBB3-208ENST00000549205 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
ERBB3-208ENST00000549205 SNAPC4Q5SXM2 1469 aa20.01■□□□□ 0.79
ERBB3-208ENST00000549205 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
ERBB3-208ENST00000549205 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
ERBB3-208ENST00000549205 RAPGEF2Q9Y4G8 1499 aa19.99■□□□□ 0.79
ERBB3-208ENST00000549205 FHAD1B1AJZ9 1412 aa19.98■□□□□ 0.79
ERBB3-208ENST00000549205 LOC105371045A0A1W2PR82 267 aa19.94■□□□□ 0.78
ERBB3-208ENST00000549205 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
ERBB3-208ENST00000549205 EHMT2Q96KQ7 1210 aa19.9■□□□□ 0.78
ERBB3-208ENST00000549205 CHD1O14646 1710 aa19.9■□□□□ 0.78
ERBB3-208ENST00000549205 GRIN2AQ12879 1464 aa19.87■□□□□ 0.77
ERBB3-208ENST00000549205 CTTNBP2Q8WZ74 1663 aa19.86■□□□□ 0.77
ERBB3-208ENST00000549205 UBTFP17480 764 aaKnown RBP19.84■□□□□ 0.77
ERBB3-208ENST00000549205 CHMP7Q8WUX9 453 aaPredicted RBP19.83■□□□□ 0.77
ERBB3-208ENST00000549205 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.76
ERBB3-208ENST00000549205 FBLN2P98095 1184 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms