RNA–Protein interactions for RNA: ENST00000548982.1

PAN2-210, Transcript of poly(A) specific ribonuclease subunit PAN2, humanhuman

TSL 3

Gene PAN2, Length 408 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN2-210ENST00000548982 NISCHQ9Y2I1 1504 aa27.02■■□□□ 1.92
PAN2-210ENST00000548982 CCDC180Q9P1Z9 1646 aa24.08■■□□□ 1.45
PAN2-210ENST00000548982 ABCC9O60706 1549 aa23.42■■□□□ 1.34
PAN2-210ENST00000548982 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
PAN2-210ENST00000548982 RB1CC1Q8TDY2 1594 aa22.56■■□□□ 1.2
PAN2-210ENST00000548982 NACADO15069 1562 aa22.54■■□□□ 1.2
PAN2-210ENST00000548982 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
PAN2-210ENST00000548982 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.17
PAN2-210ENST00000548982 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
PAN2-210ENST00000548982 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
PAN2-210ENST00000548982 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
PAN2-210ENST00000548982 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
PAN2-210ENST00000548982 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
PAN2-210ENST00000548982 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
PAN2-210ENST00000548982 DNAJC5BQ9UF47 199 aa21.37■■□□□ 1.01
PAN2-210ENST00000548982 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1.01
PAN2-210ENST00000548982 CC2D2AQ9P2K1 1620 aa21.23■□□□□ 0.99
PAN2-210ENST00000548982 CECR2Q9BXF3 1484 aa21.06■□□□□ 0.96
PAN2-210ENST00000548982 SMARCA4P51532 1647 aa21.01■□□□□ 0.95
PAN2-210ENST00000548982 BAZ1AQ9NRL2 1556 aaPredicted RBP20.94■□□□□ 0.94
PAN2-210ENST00000548982 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
PAN2-210ENST00000548982 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
PAN2-210ENST00000548982 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
PAN2-210ENST00000548982 PEG3Q9GZU2 1588 aa20.78■□□□□ 0.92
PAN2-210ENST00000548982 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
PAN2-210ENST00000548982 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
PAN2-210ENST00000548982 WIZO95785 1651 aa20.68■□□□□ 0.9
PAN2-210ENST00000548982 BAZ1BQ9UIG0 1483 aaKnown RBP20.65■□□□□ 0.9
PAN2-210ENST00000548982 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
PAN2-210ENST00000548982 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
PAN2-210ENST00000548982 NESP48681 1621 aa20.32■□□□□ 0.84
PAN2-210ENST00000548982 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
PAN2-210ENST00000548982 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
PAN2-210ENST00000548982 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
PAN2-210ENST00000548982 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
PAN2-210ENST00000548982 CADPSQ9ULU8 1353 aa20.12■□□□□ 0.81
PAN2-210ENST00000548982 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
PAN2-210ENST00000548982 THOC2Q8NI27 1593 aaKnown RBP20.07■□□□□ 0.8
PAN2-210ENST00000548982 CFTRP13569 1480 aa20.06■□□□□ 0.8
PAN2-210ENST00000548982 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
PAN2-210ENST00000548982 PDS5BQ9NTI5 1447 aa20.02■□□□□ 0.8
PAN2-210ENST00000548982 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
PAN2-210ENST00000548982 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
PAN2-210ENST00000548982 CUX2O14529 1486 aa19.92■□□□□ 0.78
PAN2-210ENST00000548982 MRC2Q9UBG0 1479 aa19.9■□□□□ 0.78
PAN2-210ENST00000548982 WDR62O43379 1518 aa19.86■□□□□ 0.77
PAN2-210ENST00000548982 URB2Q14146 1524 aaKnown RBP19.8■□□□□ 0.76
PAN2-210ENST00000548982 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
PAN2-210ENST00000548982 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
PAN2-210ENST00000548982 ABCC8Q09428 1581 aa19.58■□□□□ 0.73
PAN2-210ENST00000548982 CUX1P39880 1505 aa19.57■□□□□ 0.72
PAN2-210ENST00000548982 POLA1P09884 1462 aaPredicted RBP19.51■□□□□ 0.71
PAN2-210ENST00000548982 TARBP1Q13395 1621 aaKnown RBP19.5■□□□□ 0.71
PAN2-210ENST00000548982 IFT140Q96RY7 1462 aa19.49■□□□□ 0.71
PAN2-210ENST00000548982 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
PAN2-210ENST00000548982 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
PAN2-210ENST00000548982 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
PAN2-210ENST00000548982 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
PAN2-210ENST00000548982 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
PAN2-210ENST00000548982 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
PAN2-210ENST00000548982 TOP2BQ02880 1626 aa19.42■□□□□ 0.7
PAN2-210ENST00000548982 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
PAN2-210ENST00000548982 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
PAN2-210ENST00000548982 SOGA1O94964 1423 aa19.34■□□□□ 0.69
PAN2-210ENST00000548982 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
PAN2-210ENST00000548982 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
PAN2-210ENST00000548982 ABCA5Q8WWZ7 1642 aa19.27■□□□□ 0.68
PAN2-210ENST00000548982 ABCA10Q8WWZ4 1543 aa19.26■□□□□ 0.67
PAN2-210ENST00000548982 TDRD9Q8NDG6 1382 aaKnown RBP19.24■□□□□ 0.67
PAN2-210ENST00000548982 CHD1O14646 1710 aa19.22■□□□□ 0.67
PAN2-210ENST00000548982 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
PAN2-210ENST00000548982 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
PAN2-210ENST00000548982 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
PAN2-210ENST00000548982 DNAJC5Q9H3Z4 198 aa19.13■□□□□ 0.65
PAN2-210ENST00000548982 MAGI1Q96QZ7 1491 aaPredicted RBP19.11■□□□□ 0.65
PAN2-210ENST00000548982 ADAMTS12P58397 1594 aa19.08■□□□□ 0.65
PAN2-210ENST00000548982 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
PAN2-210ENST00000548982 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
PAN2-210ENST00000548982 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
PAN2-210ENST00000548982 FBLN2P98095 1184 aa18.96■□□□□ 0.63
PAN2-210ENST00000548982 KIF27Q86VH2 1401 aa18.96■□□□□ 0.63
PAN2-210ENST00000548982 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
PAN2-210ENST00000548982 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
PAN2-210ENST00000548982 CUL7Q14999 1698 aa18.94■□□□□ 0.62
PAN2-210ENST00000548982 FHAD1B1AJZ9 1412 aa18.93■□□□□ 0.62
PAN2-210ENST00000548982 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
PAN2-210ENST00000548982 CHMP7Q8WUX9 453 aaPredicted RBP18.91■□□□□ 0.62
PAN2-210ENST00000548982 RUSC2Q8N2Y8 1516 aa18.89■□□□□ 0.61
PAN2-210ENST00000548982 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
PAN2-210ENST00000548982 RIMBP3CA6NJZ7 1639 aa18.88■□□□□ 0.61
PAN2-210ENST00000548982 RIMBP3BA6NNM3 1639 aa18.88■□□□□ 0.61
PAN2-210ENST00000548982 RIMBP3Q9UFD9 1639 aa18.88■□□□□ 0.61
PAN2-210ENST00000548982 IGF1RP08069 1367 aa18.85■□□□□ 0.61
PAN2-210ENST00000548982 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
PAN2-210ENST00000548982 NUP160Q12769 1436 aa18.83■□□□□ 0.61
PAN2-210ENST00000548982 SHROOM2Q13796 1616 aa18.77■□□□□ 0.6
PAN2-210ENST00000548982 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
PAN2-210ENST00000548982 CHIC1Q5VXU3 224 aa18.73■□□□□ 0.59
PAN2-210ENST00000548982 ERCC6L2Q5T890 1561 aa18.72■□□□□ 0.59
PAN2-210ENST00000548982 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms