RNA–Protein interactions for RNA: ENST00000548954.5

CPM-208, Transcript of carboxypeptidase M, humanhuman

TSL 3

Gene CPM, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-208ENST00000548954 NISCHQ9Y2I1 1504 aa33■■■□□ 2.87
CPM-208ENST00000548954 ABCC9O60706 1549 aa31.03■■■□□ 2.56
CPM-208ENST00000548954 CCDC180Q9P1Z9 1646 aa29.97■■■□□ 2.39
CPM-208ENST00000548954 DNAJC5BQ9UF47 199 aa29.87■■■□□ 2.37
CPM-208ENST00000548954 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
CPM-208ENST00000548954 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
CPM-208ENST00000548954 NACADO15069 1562 aa28.58■■■□□ 2.17
CPM-208ENST00000548954 DCAF8L2P0C7V8 631 aa28.48■■■□□ 2.15
CPM-208ENST00000548954 UNC13AQ9UPW8 1703 aa28.34■■■□□ 2.13
CPM-208ENST00000548954 BICRAQ9NZM4 1560 aa28.19■■■□□ 2.1
CPM-208ENST00000548954 DNAJC5Q9H3Z4 198 aa28.08■■■□□ 2.09
CPM-208ENST00000548954 CECR2Q9BXF3 1484 aa28.02■■■□□ 2.08
CPM-208ENST00000548954 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
CPM-208ENST00000548954 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
CPM-208ENST00000548954 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
CPM-208ENST00000548954 EIF4G1Q04637 1599 aaKnown RBP27.62■■■□□ 2.01
CPM-208ENST00000548954 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
CPM-208ENST00000548954 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
CPM-208ENST00000548954 DCAF1Q9Y4B6 1507 aa27.12■■□□□ 1.93
CPM-208ENST00000548954 CUX2O14529 1486 aa27.04■■□□□ 1.92
CPM-208ENST00000548954 ERCC6Q03468 1493 aa26.9■■□□□ 1.9
CPM-208ENST00000548954 TRIM41Q8WV44 630 aa26.65■■□□□ 1.86
CPM-208ENST00000548954 NCAPD3P42695 1498 aa26.38■■□□□ 1.81
CPM-208ENST00000548954 NESP48681 1621 aa26.37■■□□□ 1.81
CPM-208ENST00000548954 THOC2Q8NI27 1593 aaKnown RBP26.23■■□□□ 1.79
CPM-208ENST00000548954 ATAD2BQ9ULI0 1458 aa26.22■■□□□ 1.79
CPM-208ENST00000548954 SMARCA2P51531 1590 aa26.14■■□□□ 1.78
CPM-208ENST00000548954 HMGXB3Q12766 1538 aa26.12■■□□□ 1.77
CPM-208ENST00000548954 BAZ1BQ9UIG0 1483 aaKnown RBP25.97■■□□□ 1.75
CPM-208ENST00000548954 KIF21AQ7Z4S6 1674 aa25.96■■□□□ 1.75
CPM-208ENST00000548954 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
CPM-208ENST00000548954 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
CPM-208ENST00000548954 PDS5BQ9NTI5 1447 aa25.89■■□□□ 1.74
CPM-208ENST00000548954 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
CPM-208ENST00000548954 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
CPM-208ENST00000548954 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
CPM-208ENST00000548954 WDR62O43379 1518 aa25.65■■□□□ 1.7
CPM-208ENST00000548954 PEG3Q9GZU2 1588 aa25.63■■□□□ 1.69
CPM-208ENST00000548954 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
CPM-208ENST00000548954 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
CPM-208ENST00000548954 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.67
CPM-208ENST00000548954 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.67
CPM-208ENST00000548954 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.67
CPM-208ENST00000548954 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.66
CPM-208ENST00000548954 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
CPM-208ENST00000548954 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
CPM-208ENST00000548954 ARHGEF11O15085 1522 aa25.29■■□□□ 1.64
CPM-208ENST00000548954 AEBP2Q6ZN18 517 aaPredicted RBP25.27■■□□□ 1.64
CPM-208ENST00000548954 CYB5RLQ6IPT4 315 aa25.23■■□□□ 1.63
CPM-208ENST00000548954 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
CPM-208ENST00000548954 WIZO95785 1651 aa25.11■■□□□ 1.61
CPM-208ENST00000548954 CFTRP13569 1480 aa25.08■■□□□ 1.6
CPM-208ENST00000548954 ZNF608Q9ULD9 1512 aaPredicted RBP25.03■■□□□ 1.6
CPM-208ENST00000548954 ARAP1Q96P48 1450 aa24.97■■□□□ 1.59
CPM-208ENST00000548954 IFT140Q96RY7 1462 aa24.95■■□□□ 1.58
CPM-208ENST00000548954 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
CPM-208ENST00000548954 FBLN2P98095 1184 aa24.84■■□□□ 1.57
CPM-208ENST00000548954 CHD1O14646 1710 aa24.82■■□□□ 1.56
CPM-208ENST00000548954 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
CPM-208ENST00000548954 TOPBP1Q92547 1522 aa24.73■■□□□ 1.55
CPM-208ENST00000548954 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
CPM-208ENST00000548954 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
CPM-208ENST00000548954 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.55
CPM-208ENST00000548954 ABCC8Q09428 1581 aa24.57■■□□□ 1.52
CPM-208ENST00000548954 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
CPM-208ENST00000548954 TARBP1Q13395 1621 aaKnown RBP24.54■■□□□ 1.52
CPM-208ENST00000548954 CLASP1Q7Z460 1538 aa24.47■■□□□ 1.51
CPM-208ENST00000548954 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.5
CPM-208ENST00000548954 CHMP7Q8WUX9 453 aaPredicted RBP24.43■■□□□ 1.5
CPM-208ENST00000548954 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
CPM-208ENST00000548954 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
CPM-208ENST00000548954 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
CPM-208ENST00000548954 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
CPM-208ENST00000548954 RAD54L2Q9Y4B4 1467 aa24.39■■□□□ 1.5
CPM-208ENST00000548954 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
CPM-208ENST00000548954 SOGA1O94964 1423 aa24.32■■□□□ 1.48
CPM-208ENST00000548954 MAGI1Q96QZ7 1491 aaPredicted RBP24.27■■□□□ 1.48
CPM-208ENST00000548954 SYNJ2O15056 1496 aa24.22■■□□□ 1.47
CPM-208ENST00000548954 ILDR1Q86SU0 546 aaPredicted RBP24.22■■□□□ 1.47
CPM-208ENST00000548954 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
CPM-208ENST00000548954 WDR97A6NE52 1622 aa24.18■■□□□ 1.46
CPM-208ENST00000548954 FGD5Q6ZNL6 1462 aa24.16■■□□□ 1.46
CPM-208ENST00000548954 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.45
CPM-208ENST00000548954 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
CPM-208ENST00000548954 KIF13AQ9H1H9 1805 aa24■■□□□ 1.43
CPM-208ENST00000548954 CUX1P39880 1505 aa23.97■■□□□ 1.43
CPM-208ENST00000548954 KDM4FA0A1W2PPD8 638 aa23.94■■□□□ 1.42
CPM-208ENST00000548954 CEP170Q5SW79 1584 aa23.94■■□□□ 1.42
CPM-208ENST00000548954 GRIN2AQ12879 1464 aa23.89■■□□□ 1.42
CPM-208ENST00000548954 FAM69CQ0P6D2 419 aa23.89■■□□□ 1.41
CPM-208ENST00000548954 ABCA5Q8WWZ7 1642 aa23.83■■□□□ 1.41
CPM-208ENST00000548954 NUP160Q12769 1436 aa23.8■■□□□ 1.4
CPM-208ENST00000548954 KDM6BO15054 1643 aa23.79■■□□□ 1.4
CPM-208ENST00000548954 ABCC10Q5T3U5 1492 aa23.78■■□□□ 1.4
CPM-208ENST00000548954 ABCA10Q8WWZ4 1543 aa23.78■■□□□ 1.4
CPM-208ENST00000548954 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
CPM-208ENST00000548954 NPM1P06748 294 aaKnown RBP eCLIP23.75■■□□□ 1.39
CPM-208ENST00000548954 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
CPM-208ENST00000548954 PRG4Q92954 1404 aaPredicted RBP23.72■■□□□ 1.39
CPM-208ENST00000548954 DIP2BQ9P265 1576 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms