RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 NISCHQ9Y2I1 1504 aa26.46■■□□□ 1.83
SCRN3-212ENST00000548868 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
SCRN3-212ENST00000548868 CCDC180Q9P1Z9 1646 aa23.38■■□□□ 1.33
SCRN3-212ENST00000548868 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
SCRN3-212ENST00000548868 ABCC9O60706 1549 aa22.3■■□□□ 1.16
SCRN3-212ENST00000548868 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
SCRN3-212ENST00000548868 DCAF1Q9Y4B6 1507 aa21.95■■□□□ 1.1
SCRN3-212ENST00000548868 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
SCRN3-212ENST00000548868 NACADO15069 1562 aa21.83■■□□□ 1.09
SCRN3-212ENST00000548868 DCAF8L2P0C7V8 631 aa21.82■■□□□ 1.08
SCRN3-212ENST00000548868 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
SCRN3-212ENST00000548868 SCRIBQ14160 1630 aa21.3■■□□□ 1
SCRN3-212ENST00000548868 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
SCRN3-212ENST00000548868 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
SCRN3-212ENST00000548868 BICRAQ9NZM4 1560 aa21.04■□□□□ 0.96
SCRN3-212ENST00000548868 PABPN1Q86U42 306 aaKnown RBP eCLIP20.88■□□□□ 0.93
SCRN3-212ENST00000548868 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.87
SCRN3-212ENST00000548868 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
SCRN3-212ENST00000548868 SMARCA4P51532 1647 aa20.45■□□□□ 0.86
SCRN3-212ENST00000548868 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
SCRN3-212ENST00000548868 MROH2BQ7Z745 1585 aa20.37■□□□□ 0.85
SCRN3-212ENST00000548868 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
SCRN3-212ENST00000548868 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
SCRN3-212ENST00000548868 PEG3Q9GZU2 1588 aa20.26■□□□□ 0.83
SCRN3-212ENST00000548868 CC2D2AQ9P2K1 1620 aa20.24■□□□□ 0.83
SCRN3-212ENST00000548868 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
SCRN3-212ENST00000548868 WIZO95785 1651 aa20.21■□□□□ 0.83
SCRN3-212ENST00000548868 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
SCRN3-212ENST00000548868 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
SCRN3-212ENST00000548868 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
SCRN3-212ENST00000548868 HMGXB3Q12766 1538 aa20.08■□□□□ 0.81
SCRN3-212ENST00000548868 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
SCRN3-212ENST00000548868 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
SCRN3-212ENST00000548868 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
SCRN3-212ENST00000548868 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
SCRN3-212ENST00000548868 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
SCRN3-212ENST00000548868 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
SCRN3-212ENST00000548868 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
SCRN3-212ENST00000548868 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
SCRN3-212ENST00000548868 CFTRP13569 1480 aa19.53■□□□□ 0.72
SCRN3-212ENST00000548868 NESP48681 1621 aa19.44■□□□□ 0.7
SCRN3-212ENST00000548868 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
SCRN3-212ENST00000548868 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
SCRN3-212ENST00000548868 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
SCRN3-212ENST00000548868 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
SCRN3-212ENST00000548868 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
SCRN3-212ENST00000548868 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
SCRN3-212ENST00000548868 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
SCRN3-212ENST00000548868 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
SCRN3-212ENST00000548868 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
SCRN3-212ENST00000548868 DNMBPQ6XZF7 1577 aa19.11■□□□□ 0.65
SCRN3-212ENST00000548868 THOC2Q8NI27 1593 aaKnown RBP19.1■□□□□ 0.65
SCRN3-212ENST00000548868 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
SCRN3-212ENST00000548868 CUX1P39880 1505 aa19.09■□□□□ 0.65
SCRN3-212ENST00000548868 SYNJ1O43426 1573 aa19.09■□□□□ 0.65
SCRN3-212ENST00000548868 URB2Q14146 1524 aaKnown RBP19.09■□□□□ 0.65
SCRN3-212ENST00000548868 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
SCRN3-212ENST00000548868 WDR62O43379 1518 aa19.06■□□□□ 0.64
SCRN3-212ENST00000548868 TRIM41Q8WV44 630 aa19■□□□□ 0.63
SCRN3-212ENST00000548868 FGD5Q6ZNL6 1462 aa18.96■□□□□ 0.63
SCRN3-212ENST00000548868 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
SCRN3-212ENST00000548868 CUX2O14529 1486 aa18.86■□□□□ 0.61
SCRN3-212ENST00000548868 SOGA1O94964 1423 aa18.85■□□□□ 0.61
SCRN3-212ENST00000548868 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
SCRN3-212ENST00000548868 TARBP1Q13395 1621 aaKnown RBP18.84■□□□□ 0.61
SCRN3-212ENST00000548868 IFT140Q96RY7 1462 aa18.83■□□□□ 0.61
SCRN3-212ENST00000548868 RAD54L2Q9Y4B4 1467 aa18.82■□□□□ 0.6
SCRN3-212ENST00000548868 ABCA10Q8WWZ4 1543 aa18.82■□□□□ 0.6
SCRN3-212ENST00000548868 FOXD1Q16676 465 aa18.8■□□□□ 0.6
SCRN3-212ENST00000548868 ABCA5Q8WWZ7 1642 aa18.72■□□□□ 0.59
SCRN3-212ENST00000548868 EEA1Q15075 1411 aa18.72■□□□□ 0.59
SCRN3-212ENST00000548868 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
SCRN3-212ENST00000548868 EIF4G3O43432 1585 aaKnown RBP18.67■□□□□ 0.58
SCRN3-212ENST00000548868 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
SCRN3-212ENST00000548868 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
SCRN3-212ENST00000548868 GAPVD1Q14C86 1478 aa18.66■□□□□ 0.58
SCRN3-212ENST00000548868 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
SCRN3-212ENST00000548868 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
SCRN3-212ENST00000548868 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.57
SCRN3-212ENST00000548868 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
SCRN3-212ENST00000548868 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
SCRN3-212ENST00000548868 CUL7Q14999 1698 aa18.57■□□□□ 0.56
SCRN3-212ENST00000548868 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
SCRN3-212ENST00000548868 IGF1RP08069 1367 aa18.56■□□□□ 0.56
SCRN3-212ENST00000548868 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
SCRN3-212ENST00000548868 MAGI1Q96QZ7 1491 aaPredicted RBP18.51■□□□□ 0.55
SCRN3-212ENST00000548868 KIF21BO75037 1637 aa18.5■□□□□ 0.55
SCRN3-212ENST00000548868 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
SCRN3-212ENST00000548868 SNAPC4Q5SXM2 1469 aa18.49■□□□□ 0.55
SCRN3-212ENST00000548868 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
SCRN3-212ENST00000548868 CARMIL1Q5VZK9 1371 aa18.47■□□□□ 0.55
SCRN3-212ENST00000548868 FHAD1B1AJZ9 1412 aa18.46■□□□□ 0.55
SCRN3-212ENST00000548868 RAPGEF2Q9Y4G8 1499 aa18.43■□□□□ 0.54
SCRN3-212ENST00000548868 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
SCRN3-212ENST00000548868 GOLGA3Q08378 1498 aa18.39■□□□□ 0.53
SCRN3-212ENST00000548868 CHD1O14646 1710 aa18.37■□□□□ 0.53
SCRN3-212ENST00000548868 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
SCRN3-212ENST00000548868 CHMP7Q8WUX9 453 aaPredicted RBP18.34■□□□□ 0.53
SCRN3-212ENST00000548868 CTTNBP2Q8WZ74 1663 aa18.31■□□□□ 0.52
SCRN3-212ENST00000548868 FBLN2P98095 1184 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms