RNA–Protein interactions for RNA: ENST00000548851.5

TSFM-209, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 3 BASIC

Gene TSFM, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-209ENST00000548851 NISCHQ9Y2I1 1504 aa24.48■■□□□ 1.51
TSFM-209ENST00000548851 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
TSFM-209ENST00000548851 ABCC9O60706 1549 aa21.34■■□□□ 1.01
TSFM-209ENST00000548851 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
TSFM-209ENST00000548851 NACADO15069 1562 aa20.54■□□□□ 0.88
TSFM-209ENST00000548851 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
TSFM-209ENST00000548851 DCAF8L2P0C7V8 631 aa20.41■□□□□ 0.86
TSFM-209ENST00000548851 ZCCHC6Q5VYS8 1495 aaKnown RBP20.37■□□□□ 0.85
TSFM-209ENST00000548851 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
TSFM-209ENST00000548851 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
TSFM-209ENST00000548851 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
TSFM-209ENST00000548851 PABPN1Q86U42 306 aaKnown RBP eCLIP19.92■□□□□ 0.78
TSFM-209ENST00000548851 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
TSFM-209ENST00000548851 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
TSFM-209ENST00000548851 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
TSFM-209ENST00000548851 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
TSFM-209ENST00000548851 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.68
TSFM-209ENST00000548851 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
TSFM-209ENST00000548851 SMARCA4P51532 1647 aa19■□□□□ 0.63
TSFM-209ENST00000548851 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
TSFM-209ENST00000548851 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
TSFM-209ENST00000548851 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
TSFM-209ENST00000548851 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
TSFM-209ENST00000548851 AEBP2Q6ZN18 517 aaPredicted RBP18.89■□□□□ 0.61
TSFM-209ENST00000548851 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
TSFM-209ENST00000548851 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
TSFM-209ENST00000548851 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.6
TSFM-209ENST00000548851 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
TSFM-209ENST00000548851 WIZO95785 1651 aa18.61■□□□□ 0.57
TSFM-209ENST00000548851 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
TSFM-209ENST00000548851 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
TSFM-209ENST00000548851 NESP48681 1621 aa18.45■□□□□ 0.54
TSFM-209ENST00000548851 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
TSFM-209ENST00000548851 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
TSFM-209ENST00000548851 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
TSFM-209ENST00000548851 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
TSFM-209ENST00000548851 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
TSFM-209ENST00000548851 CUX2O14529 1486 aa18.3■□□□□ 0.52
TSFM-209ENST00000548851 CFTRP13569 1480 aa18.26■□□□□ 0.51
TSFM-209ENST00000548851 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
TSFM-209ENST00000548851 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
TSFM-209ENST00000548851 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
TSFM-209ENST00000548851 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.5
TSFM-209ENST00000548851 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.49
TSFM-209ENST00000548851 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
TSFM-209ENST00000548851 PRDM2Q13029 1718 aa18.1■□□□□ 0.49
TSFM-209ENST00000548851 WDR62O43379 1518 aa18.07■□□□□ 0.48
TSFM-209ENST00000548851 SUPT5HO00267 1087 aaKnown RBP18.02■□□□□ 0.48
TSFM-209ENST00000548851 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
TSFM-209ENST00000548851 ABCC8Q09428 1581 aa17.9■□□□□ 0.46
TSFM-209ENST00000548851 TOPBP1Q92547 1522 aa17.84■□□□□ 0.45
TSFM-209ENST00000548851 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
TSFM-209ENST00000548851 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.44
TSFM-209ENST00000548851 IFT140Q96RY7 1462 aa17.77■□□□□ 0.44
TSFM-209ENST00000548851 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
TSFM-209ENST00000548851 CUX1P39880 1505 aa17.67■□□□□ 0.42
TSFM-209ENST00000548851 TARBP1Q13395 1621 aaKnown RBP17.67■□□□□ 0.42
TSFM-209ENST00000548851 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
TSFM-209ENST00000548851 SOGA1O94964 1423 aa17.63■□□□□ 0.41
TSFM-209ENST00000548851 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
TSFM-209ENST00000548851 EIF4G3O43432 1585 aaKnown RBP17.59■□□□□ 0.41
TSFM-209ENST00000548851 RAD54L2Q9Y4B4 1467 aa17.58■□□□□ 0.41
TSFM-209ENST00000548851 WDR97A6NE52 1622 aa17.57■□□□□ 0.4
TSFM-209ENST00000548851 AQRO60306 1485 aaKnown RBP eCLIP17.55■□□□□ 0.41e-6■■■■■ 37.7
TSFM-209ENST00000548851 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
TSFM-209ENST00000548851 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
TSFM-209ENST00000548851 TOP2BQ02880 1626 aa17.52■□□□□ 0.4
TSFM-209ENST00000548851 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
TSFM-209ENST00000548851 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
TSFM-209ENST00000548851 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
TSFM-209ENST00000548851 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
TSFM-209ENST00000548851 GRIN2BQ13224 1484 aa17.44■□□□□ 0.38
TSFM-209ENST00000548851 GAPVD1Q14C86 1478 aa17.42■□□□□ 0.38
TSFM-209ENST00000548851 MAGI1Q96QZ7 1491 aaPredicted RBP17.41■□□□□ 0.38
TSFM-209ENST00000548851 ABCA5Q8WWZ7 1642 aa17.39■□□□□ 0.38
TSFM-209ENST00000548851 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
TSFM-209ENST00000548851 CHD1O14646 1710 aa17.38■□□□□ 0.37
TSFM-209ENST00000548851 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
TSFM-209ENST00000548851 FBLN2P98095 1184 aa17.34■□□□□ 0.37
TSFM-209ENST00000548851 SYNJ2O15056 1496 aa17.33■□□□□ 0.37
TSFM-209ENST00000548851 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
TSFM-209ENST00000548851 ERICH3Q5RHP9 1530 aa17.28■□□□□ 0.36
TSFM-209ENST00000548851 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
TSFM-209ENST00000548851 ADAMTS12P58397 1594 aa17.23■□□□□ 0.35
TSFM-209ENST00000548851 ARHGEF11O15085 1522 aa17.21■□□□□ 0.35
TSFM-209ENST00000548851 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
TSFM-209ENST00000548851 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
TSFM-209ENST00000548851 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
TSFM-209ENST00000548851 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
TSFM-209ENST00000548851 GRIN2AQ12879 1464 aa17.2■□□□□ 0.34
TSFM-209ENST00000548851 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
TSFM-209ENST00000548851 IGF1RP08069 1367 aa17.15■□□□□ 0.34
TSFM-209ENST00000548851 NUP160Q12769 1436 aa17.14■□□□□ 0.33
TSFM-209ENST00000548851 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
TSFM-209ENST00000548851 CEP170Q5SW79 1584 aa17.1■□□□□ 0.33
TSFM-209ENST00000548851 CUL7Q14999 1698 aa17.1■□□□□ 0.33
TSFM-209ENST00000548851 ARAP1Q96P48 1450 aa17.06■□□□□ 0.32
TSFM-209ENST00000548851 CYB5RLQ6IPT4 315 aa17.05■□□□□ 0.32
TSFM-209ENST00000548851 CARMIL1Q5VZK9 1371 aa17.03■□□□□ 0.32
TSFM-209ENST00000548851 SHROOM2Q13796 1616 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms