RNA–Protein interactions for RNA: ENST00000548824.5

RACGAP1-215, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 586 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-215ENST00000548824 NISCHQ9Y2I1 1504 aa27.73■■■□□ 2.03
RACGAP1-215ENST00000548824 CCDC180Q9P1Z9 1646 aa24.89■■□□□ 1.57
RACGAP1-215ENST00000548824 ABCC9O60706 1549 aa24.71■■□□□ 1.55
RACGAP1-215ENST00000548824 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
RACGAP1-215ENST00000548824 NACADO15069 1562 aa23.55■■□□□ 1.36
RACGAP1-215ENST00000548824 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
RACGAP1-215ENST00000548824 MYO15BQ96JP2 1530 aa23.26■■□□□ 1.31
RACGAP1-215ENST00000548824 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
RACGAP1-215ENST00000548824 DNAJC5BQ9UF47 199 aa22.99■■□□□ 1.27
RACGAP1-215ENST00000548824 UNC13AQ9UPW8 1703 aa22.99■■□□□ 1.27
RACGAP1-215ENST00000548824 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
RACGAP1-215ENST00000548824 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
RACGAP1-215ENST00000548824 BICRAQ9NZM4 1560 aa22.79■■□□□ 1.24
RACGAP1-215ENST00000548824 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
RACGAP1-215ENST00000548824 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
RACGAP1-215ENST00000548824 CC2D2AQ9P2K1 1620 aa22.34■■□□□ 1.17
RACGAP1-215ENST00000548824 EIF4G1Q04637 1599 aaKnown RBP22.32■■□□□ 1.16
RACGAP1-215ENST00000548824 CECR2Q9BXF3 1484 aa22.3■■□□□ 1.16
RACGAP1-215ENST00000548824 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
RACGAP1-215ENST00000548824 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
RACGAP1-215ENST00000548824 ATAD2BQ9ULI0 1458 aa21.6■■□□□ 1.05
RACGAP1-215ENST00000548824 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
RACGAP1-215ENST00000548824 SMARCA4P51532 1647 aa21.58■■□□□ 1.05
RACGAP1-215ENST00000548824 HMGXB3Q12766 1538 aa21.53■■□□□ 1.04
RACGAP1-215ENST00000548824 ERCC6Q03468 1493 aa21.46■■□□□ 1.03
RACGAP1-215ENST00000548824 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.03
RACGAP1-215ENST00000548824 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
RACGAP1-215ENST00000548824 CUX2O14529 1486 aa21.37■■□□□ 1.01
RACGAP1-215ENST00000548824 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
RACGAP1-215ENST00000548824 DNAJC5Q9H3Z4 198 aa21.24■□□□□ 0.99
RACGAP1-215ENST00000548824 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
RACGAP1-215ENST00000548824 NESP48681 1621 aa21.18■□□□□ 0.98
RACGAP1-215ENST00000548824 PDS5BQ9NTI5 1447 aa21.18■□□□□ 0.98
RACGAP1-215ENST00000548824 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.96
RACGAP1-215ENST00000548824 WIZO95785 1651 aa21.05■□□□□ 0.96
RACGAP1-215ENST00000548824 THOC2Q8NI27 1593 aaKnown RBP20.96■□□□□ 0.95
RACGAP1-215ENST00000548824 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
RACGAP1-215ENST00000548824 RSF1Q96T23 1441 aaPredicted RBP20.94■□□□□ 0.94
RACGAP1-215ENST00000548824 MRC2Q9UBG0 1479 aa20.87■□□□□ 0.93
RACGAP1-215ENST00000548824 TOP2AP11388 1531 aaKnown RBP20.86■□□□□ 0.93
RACGAP1-215ENST00000548824 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
RACGAP1-215ENST00000548824 CFTRP13569 1480 aa20.81■□□□□ 0.92
RACGAP1-215ENST00000548824 FANCD2Q9BXW9 1451 aa20.8■□□□□ 0.92
RACGAP1-215ENST00000548824 WDR62O43379 1518 aa20.77■□□□□ 0.92
RACGAP1-215ENST00000548824 PRDM2Q13029 1718 aa20.64■□□□□ 0.89
RACGAP1-215ENST00000548824 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
RACGAP1-215ENST00000548824 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
RACGAP1-215ENST00000548824 OSCARQ8IYS5 282 aa20.52■□□□□ 0.88
RACGAP1-215ENST00000548824 URB2Q14146 1524 aaKnown RBP20.52■□□□□ 0.87
RACGAP1-215ENST00000548824 IFT140Q96RY7 1462 aa20.44■□□□□ 0.86
RACGAP1-215ENST00000548824 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
RACGAP1-215ENST00000548824 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
RACGAP1-215ENST00000548824 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
RACGAP1-215ENST00000548824 ZNF608Q9ULD9 1512 aaPredicted RBP20.23■□□□□ 0.83
RACGAP1-215ENST00000548824 SUPT5HO00267 1087 aaKnown RBP20.2■□□□□ 0.82
RACGAP1-215ENST00000548824 SOGA1O94964 1423 aa20.18■□□□□ 0.82
RACGAP1-215ENST00000548824 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
RACGAP1-215ENST00000548824 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
RACGAP1-215ENST00000548824 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
RACGAP1-215ENST00000548824 FBLN2P98095 1184 aa20.14■□□□□ 0.81
RACGAP1-215ENST00000548824 AQRO60306 1485 aaKnown RBP eCLIP20.13■□□□□ 0.81
RACGAP1-215ENST00000548824 WDR97A6NE52 1622 aa20.12■□□□□ 0.81
RACGAP1-215ENST00000548824 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
RACGAP1-215ENST00000548824 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
RACGAP1-215ENST00000548824 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
RACGAP1-215ENST00000548824 TDRD9Q8NDG6 1382 aaKnown RBP20.05■□□□□ 0.8
RACGAP1-215ENST00000548824 RIMBP3CA6NJZ7 1639 aa20.03■□□□□ 0.8
RACGAP1-215ENST00000548824 RIMBP3BA6NNM3 1639 aa20.03■□□□□ 0.8
RACGAP1-215ENST00000548824 RIMBP3Q9UFD9 1639 aa20.03■□□□□ 0.8
RACGAP1-215ENST00000548824 CHD1O14646 1710 aa20.02■□□□□ 0.79
RACGAP1-215ENST00000548824 CUX1P39880 1505 aa20■□□□□ 0.79
RACGAP1-215ENST00000548824 ARHGEF11O15085 1522 aa19.99■□□□□ 0.79
RACGAP1-215ENST00000548824 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
RACGAP1-215ENST00000548824 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
RACGAP1-215ENST00000548824 CYB5RLQ6IPT4 315 aa19.96■□□□□ 0.79
RACGAP1-215ENST00000548824 SNAPC4Q5SXM2 1469 aa19.93■□□□□ 0.78
RACGAP1-215ENST00000548824 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
RACGAP1-215ENST00000548824 GAPVD1Q14C86 1478 aa19.91■□□□□ 0.78
RACGAP1-215ENST00000548824 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
RACGAP1-215ENST00000548824 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
RACGAP1-215ENST00000548824 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
RACGAP1-215ENST00000548824 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
RACGAP1-215ENST00000548824 TOP2BQ02880 1626 aa19.79■□□□□ 0.76
RACGAP1-215ENST00000548824 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
RACGAP1-215ENST00000548824 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
RACGAP1-215ENST00000548824 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
RACGAP1-215ENST00000548824 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
RACGAP1-215ENST00000548824 ARAP1Q96P48 1450 aa19.75■□□□□ 0.75
RACGAP1-215ENST00000548824 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
RACGAP1-215ENST00000548824 ERICH3Q5RHP9 1530 aa19.67■□□□□ 0.74
RACGAP1-215ENST00000548824 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
RACGAP1-215ENST00000548824 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
RACGAP1-215ENST00000548824 NUP160Q12769 1436 aa19.58■□□□□ 0.72
RACGAP1-215ENST00000548824 JPH4Q96JJ6 628 aa19.52■□□□□ 0.72
RACGAP1-215ENST00000548824 CEP170Q5SW79 1584 aa19.52■□□□□ 0.71
RACGAP1-215ENST00000548824 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
RACGAP1-215ENST00000548824 NPM1P06748 294 aaKnown RBP eCLIP19.46■□□□□ 0.71
RACGAP1-215ENST00000548824 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
RACGAP1-215ENST00000548824 PRG4Q92954 1404 aaPredicted RBP19.44■□□□□ 0.7
RACGAP1-215ENST00000548824 CUL7Q14999 1698 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms