RNA–Protein interactions for RNA: ENST00000548564.1

LINC02354-202, Transcript of long intergenic non-protein coding RNA 2354, humanhuman

TSL 4 BASIC

Gene LINC02354, Length 573 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02354-202ENST00000548564 NISCHQ9Y2I1 1504 aa29.88■■■□□ 2.37
LINC02354-202ENST00000548564 CCDC180Q9P1Z9 1646 aa26.74■■□□□ 1.87
LINC02354-202ENST00000548564 ABCC9O60706 1549 aa26.49■■□□□ 1.83
LINC02354-202ENST00000548564 RB1CC1Q8TDY2 1594 aa25.35■■□□□ 1.65
LINC02354-202ENST00000548564 NACADO15069 1562 aa25.23■■□□□ 1.63
LINC02354-202ENST00000548564 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
LINC02354-202ENST00000548564 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
LINC02354-202ENST00000548564 ZCCHC6Q5VYS8 1495 aaKnown RBP24.8■■□□□ 1.56
LINC02354-202ENST00000548564 UNC13AQ9UPW8 1703 aa24.75■■□□□ 1.55
LINC02354-202ENST00000548564 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
LINC02354-202ENST00000548564 PABPN1Q86U42 306 aaKnown RBP eCLIP24.71■■□□□ 1.55
LINC02354-202ENST00000548564 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
LINC02354-202ENST00000548564 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
LINC02354-202ENST00000548564 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
LINC02354-202ENST00000548564 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
LINC02354-202ENST00000548564 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.43
LINC02354-202ENST00000548564 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.42
LINC02354-202ENST00000548564 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
LINC02354-202ENST00000548564 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
LINC02354-202ENST00000548564 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
LINC02354-202ENST00000548564 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
LINC02354-202ENST00000548564 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
LINC02354-202ENST00000548564 BAZ1AQ9NRL2 1556 aaPredicted RBP23.21■■□□□ 1.31
LINC02354-202ENST00000548564 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
LINC02354-202ENST00000548564 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
LINC02354-202ENST00000548564 PEG3Q9GZU2 1588 aa23.03■■□□□ 1.28
LINC02354-202ENST00000548564 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
LINC02354-202ENST00000548564 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
LINC02354-202ENST00000548564 NESP48681 1621 aa22.8■■□□□ 1.24
LINC02354-202ENST00000548564 CUX2O14529 1486 aa22.77■■□□□ 1.24
LINC02354-202ENST00000548564 WIZO95785 1651 aa22.75■■□□□ 1.23
LINC02354-202ENST00000548564 LAMC3Q9Y6N6 1575 aa22.74■■□□□ 1.23
LINC02354-202ENST00000548564 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
LINC02354-202ENST00000548564 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
LINC02354-202ENST00000548564 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
LINC02354-202ENST00000548564 KIF21AQ7Z4S6 1674 aa22.54■■□□□ 1.2
LINC02354-202ENST00000548564 THOC2Q8NI27 1593 aaKnown RBP22.53■■□□□ 1.2
LINC02354-202ENST00000548564 DNAJC5Q9H3Z4 198 aa22.5■■□□□ 1.19
LINC02354-202ENST00000548564 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
LINC02354-202ENST00000548564 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
LINC02354-202ENST00000548564 CFTRP13569 1480 aa22.36■■□□□ 1.17
LINC02354-202ENST00000548564 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
LINC02354-202ENST00000548564 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
LINC02354-202ENST00000548564 WDR62O43379 1518 aa22.29■■□□□ 1.16
LINC02354-202ENST00000548564 CCDC88BA6NC98 1476 aa22.23■■□□□ 1.15
LINC02354-202ENST00000548564 PRDM2Q13029 1718 aa22.18■■□□□ 1.14
LINC02354-202ENST00000548564 URB2Q14146 1524 aaKnown RBP22.1■■□□□ 1.13
LINC02354-202ENST00000548564 ABCC8Q09428 1581 aa21.95■■□□□ 1.11
LINC02354-202ENST00000548564 TOPBP1Q92547 1522 aa21.92■■□□□ 1.1
LINC02354-202ENST00000548564 IFT140Q96RY7 1462 aa21.89■■□□□ 1.09
LINC02354-202ENST00000548564 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
LINC02354-202ENST00000548564 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
LINC02354-202ENST00000548564 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
LINC02354-202ENST00000548564 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
LINC02354-202ENST00000548564 ZNF608Q9ULD9 1512 aaPredicted RBP21.78■■□□□ 1.08
LINC02354-202ENST00000548564 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
LINC02354-202ENST00000548564 TARBP1Q13395 1621 aaKnown RBP21.69■■□□□ 1.06
LINC02354-202ENST00000548564 EIF4G3O43432 1585 aaKnown RBP21.69■■□□□ 1.06
LINC02354-202ENST00000548564 SOGA1O94964 1423 aa21.64■■□□□ 1.06
LINC02354-202ENST00000548564 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.05
LINC02354-202ENST00000548564 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
LINC02354-202ENST00000548564 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
LINC02354-202ENST00000548564 CUX1P39880 1505 aa21.6■■□□□ 1.05
LINC02354-202ENST00000548564 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
LINC02354-202ENST00000548564 TDRD9Q8NDG6 1382 aaKnown RBP21.55■■□□□ 1.04
LINC02354-202ENST00000548564 WDR97A6NE52 1622 aa21.54■■□□□ 1.04
LINC02354-202ENST00000548564 FBLN2P98095 1184 aa21.51■■□□□ 1.03
LINC02354-202ENST00000548564 CHD1O14646 1710 aa21.5■■□□□ 1.03
LINC02354-202ENST00000548564 RIMBP3CA6NJZ7 1639 aa21.44■■□□□ 1.02
LINC02354-202ENST00000548564 RIMBP3BA6NNM3 1639 aa21.44■■□□□ 1.02
LINC02354-202ENST00000548564 RIMBP3Q9UFD9 1639 aa21.44■■□□□ 1.02
LINC02354-202ENST00000548564 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
LINC02354-202ENST00000548564 SNAPC4Q5SXM2 1469 aa21.42■■□□□ 1.02
LINC02354-202ENST00000548564 MAGI1Q96QZ7 1491 aaPredicted RBP21.4■■□□□ 1.02
LINC02354-202ENST00000548564 ARHGEF11O15085 1522 aa21.39■■□□□ 1.02
LINC02354-202ENST00000548564 CHMP7Q8WUX9 453 aaPredicted RBP21.39■■□□□ 1.01
LINC02354-202ENST00000548564 ABCA10Q8WWZ4 1543 aa21.38■■□□□ 1.01
LINC02354-202ENST00000548564 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
LINC02354-202ENST00000548564 WRNQ14191 1432 aaPredicted RBP eCLIP21.37■■□□□ 1.01
LINC02354-202ENST00000548564 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
LINC02354-202ENST00000548564 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
LINC02354-202ENST00000548564 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
LINC02354-202ENST00000548564 SYNJ2O15056 1496 aa21.32■■□□□ 1
LINC02354-202ENST00000548564 ABCA5Q8WWZ7 1642 aa21.31■■□□□ 1
LINC02354-202ENST00000548564 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
LINC02354-202ENST00000548564 SYNJ1O43426 1573 aa21.3■■□□□ 1
LINC02354-202ENST00000548564 CYB5RLQ6IPT4 315 aa21.26■□□□□ 0.99
LINC02354-202ENST00000548564 CLASP1Q7Z460 1538 aa21.24■□□□□ 0.99
LINC02354-202ENST00000548564 ARAP1Q96P48 1450 aa21.18■□□□□ 0.98
LINC02354-202ENST00000548564 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.97
LINC02354-202ENST00000548564 GRIN2AQ12879 1464 aa21.13■□□□□ 0.97
LINC02354-202ENST00000548564 ADAMTS12P58397 1594 aa21.13■□□□□ 0.97
LINC02354-202ENST00000548564 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
LINC02354-202ENST00000548564 NUP160Q12769 1436 aa21.04■□□□□ 0.96
LINC02354-202ENST00000548564 CEP170Q5SW79 1584 aa21.02■□□□□ 0.96
LINC02354-202ENST00000548564 TRHP20396 242 aaPredicted RBP20.98■□□□□ 0.95
LINC02354-202ENST00000548564 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
LINC02354-202ENST00000548564 SHROOM2Q13796 1616 aa20.92■□□□□ 0.94
LINC02354-202ENST00000548564 IGF1RP08069 1367 aa20.91■□□□□ 0.94
LINC02354-202ENST00000548564 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms