RNA–Protein interactions for RNA: ENST00000548441.1

ERGIC2-205, Transcript of ERGIC and golgi 2, humanhuman

TSL 3

Gene ERGIC2, Length 432 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-205ENST00000548441 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
ERGIC2-205ENST00000548441 ABCC9O60706 1549 aa24.67■■□□□ 1.54
ERGIC2-205ENST00000548441 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
ERGIC2-205ENST00000548441 DNAJC5BQ9UF47 199 aa23.54■■□□□ 1.36
ERGIC2-205ENST00000548441 RB1CC1Q8TDY2 1594 aa23.28■■□□□ 1.32
ERGIC2-205ENST00000548441 NACADO15069 1562 aa22.99■■□□□ 1.27
ERGIC2-205ENST00000548441 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
ERGIC2-205ENST00000548441 UNC13AQ9UPW8 1703 aa22.85■■□□□ 1.25
ERGIC2-205ENST00000548441 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
ERGIC2-205ENST00000548441 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.22
ERGIC2-205ENST00000548441 MYO15BQ96JP2 1530 aa22.49■■□□□ 1.19
ERGIC2-205ENST00000548441 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
ERGIC2-205ENST00000548441 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
ERGIC2-205ENST00000548441 SHROOM4Q9ULL8 1493 aa22.25■■□□□ 1.15
ERGIC2-205ENST00000548441 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
ERGIC2-205ENST00000548441 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
ERGIC2-205ENST00000548441 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
ERGIC2-205ENST00000548441 ZCCHC6Q5VYS8 1495 aaKnown RBP22.05■■□□□ 1.12
ERGIC2-205ENST00000548441 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
ERGIC2-205ENST00000548441 DNAJC5Q9H3Z4 198 aa21.95■■□□□ 1.1
ERGIC2-205ENST00000548441 CUX2O14529 1486 aa21.45■■□□□ 1.03
ERGIC2-205ENST00000548441 ERCC6Q03468 1493 aa21.33■■□□□ 1.01
ERGIC2-205ENST00000548441 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
ERGIC2-205ENST00000548441 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.97
ERGIC2-205ENST00000548441 NESP48681 1621 aa21.07■□□□□ 0.96
ERGIC2-205ENST00000548441 HMGXB3Q12766 1538 aa21.04■□□□□ 0.96
ERGIC2-205ENST00000548441 SMARCA2P51531 1590 aa21.02■□□□□ 0.95
ERGIC2-205ENST00000548441 THOC2Q8NI27 1593 aaKnown RBP20.99■□□□□ 0.95
ERGIC2-205ENST00000548441 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
ERGIC2-205ENST00000548441 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
ERGIC2-205ENST00000548441 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
ERGIC2-205ENST00000548441 KIF21AQ7Z4S6 1674 aa20.85■□□□□ 0.93
ERGIC2-205ENST00000548441 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
ERGIC2-205ENST00000548441 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
ERGIC2-205ENST00000548441 BAZ1AQ9NRL2 1556 aaPredicted RBP20.78■□□□□ 0.92
ERGIC2-205ENST00000548441 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
ERGIC2-205ENST00000548441 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
ERGIC2-205ENST00000548441 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
ERGIC2-205ENST00000548441 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.89
ERGIC2-205ENST00000548441 WDR62O43379 1518 aa20.56■□□□□ 0.88
ERGIC2-205ENST00000548441 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.88
ERGIC2-205ENST00000548441 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
ERGIC2-205ENST00000548441 WIZO95785 1651 aa20.35■□□□□ 0.85
ERGIC2-205ENST00000548441 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
ERGIC2-205ENST00000548441 FANCD2Q9BXW9 1451 aa20.32■□□□□ 0.84
ERGIC2-205ENST00000548441 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
ERGIC2-205ENST00000548441 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
ERGIC2-205ENST00000548441 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
ERGIC2-205ENST00000548441 CFTRP13569 1480 aa20.21■□□□□ 0.83
ERGIC2-205ENST00000548441 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
ERGIC2-205ENST00000548441 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
ERGIC2-205ENST00000548441 PRDM2Q13029 1718 aa20.09■□□□□ 0.81
ERGIC2-205ENST00000548441 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
ERGIC2-205ENST00000548441 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
ERGIC2-205ENST00000548441 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
ERGIC2-205ENST00000548441 RSF1Q96T23 1441 aaPredicted RBP19.95■□□□□ 0.78
ERGIC2-205ENST00000548441 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
ERGIC2-205ENST00000548441 CHD1O14646 1710 aa19.92■□□□□ 0.78
ERGIC2-205ENST00000548441 CYB5RLQ6IPT4 315 aa19.91■□□□□ 0.78
ERGIC2-205ENST00000548441 TOPBP1Q92547 1522 aa19.9■□□□□ 0.78
ERGIC2-205ENST00000548441 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
ERGIC2-205ENST00000548441 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
ERGIC2-205ENST00000548441 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
ERGIC2-205ENST00000548441 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
ERGIC2-205ENST00000548441 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
ERGIC2-205ENST00000548441 TARBP1Q13395 1621 aaKnown RBP19.78■□□□□ 0.76
ERGIC2-205ENST00000548441 AQRO60306 1485 aaKnown RBP eCLIP19.77■□□□□ 0.76
ERGIC2-205ENST00000548441 FBLN2P98095 1184 aa19.71■□□□□ 0.75
ERGIC2-205ENST00000548441 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
ERGIC2-205ENST00000548441 CLASP1Q7Z460 1538 aa19.62■□□□□ 0.73
ERGIC2-205ENST00000548441 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
ERGIC2-205ENST00000548441 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
ERGIC2-205ENST00000548441 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
ERGIC2-205ENST00000548441 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
ERGIC2-205ENST00000548441 WDR97A6NE52 1622 aa19.54■□□□□ 0.72
ERGIC2-205ENST00000548441 SOGA1O94964 1423 aa19.53■□□□□ 0.72
ERGIC2-205ENST00000548441 MAGI1Q96QZ7 1491 aaPredicted RBP19.49■□□□□ 0.71
ERGIC2-205ENST00000548441 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
ERGIC2-205ENST00000548441 FGD5Q6ZNL6 1462 aa19.47■□□□□ 0.71
ERGIC2-205ENST00000548441 SYNJ2O15056 1496 aa19.43■□□□□ 0.7
ERGIC2-205ENST00000548441 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
ERGIC2-205ENST00000548441 PBRM1Q86U86 1689 aa19.42■□□□□ 0.7
ERGIC2-205ENST00000548441 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
ERGIC2-205ENST00000548441 CUX1P39880 1505 aa19.39■□□□□ 0.69
ERGIC2-205ENST00000548441 ERCC6L2Q5T890 1561 aa19.29■□□□□ 0.68
ERGIC2-205ENST00000548441 ABCA5Q8WWZ7 1642 aa19.27■□□□□ 0.68
ERGIC2-205ENST00000548441 KIF13AQ9H1H9 1805 aa19.22■□□□□ 0.67
ERGIC2-205ENST00000548441 ABCA10Q8WWZ4 1543 aa19.21■□□□□ 0.67
ERGIC2-205ENST00000548441 CEP170Q5SW79 1584 aa19.2■□□□□ 0.66
ERGIC2-205ENST00000548441 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
ERGIC2-205ENST00000548441 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
ERGIC2-205ENST00000548441 SHROOM2Q13796 1616 aa19.15■□□□□ 0.66
ERGIC2-205ENST00000548441 NUP160Q12769 1436 aa19.14■□□□□ 0.65
ERGIC2-205ENST00000548441 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
ERGIC2-205ENST00000548441 WRNQ14191 1432 aaPredicted RBP eCLIP19.01■□□□□ 0.63
ERGIC2-205ENST00000548441 PRG4Q92954 1404 aaPredicted RBP18.99■□□□□ 0.63
ERGIC2-205ENST00000548441 BIVM-ERCC5R4GMW8 1640 aa18.98■□□□□ 0.63
ERGIC2-205ENST00000548441 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
ERGIC2-205ENST00000548441 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
ERGIC2-205ENST00000548441 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms