RNA–Protein interactions for RNA: ENST00000548403.1

TWF1-208, Transcript of twinfilin actin binding protein 1, humanhuman

TSL 5

Gene TWF1, Length 396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWF1-208ENST00000548403 NISCHQ9Y2I1 1504 aa32.05■■■□□ 2.72
TWF1-208ENST00000548403 ABCC9O60706 1549 aa29.04■■■□□ 2.24
TWF1-208ENST00000548403 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
TWF1-208ENST00000548403 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
TWF1-208ENST00000548403 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
TWF1-208ENST00000548403 NACADO15069 1562 aa27.33■■□□□ 1.97
TWF1-208ENST00000548403 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
TWF1-208ENST00000548403 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
TWF1-208ENST00000548403 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
TWF1-208ENST00000548403 MYO15BQ96JP2 1530 aa26.88■■□□□ 1.89
TWF1-208ENST00000548403 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
TWF1-208ENST00000548403 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
TWF1-208ENST00000548403 DCAF1Q9Y4B6 1507 aa26.46■■□□□ 1.83
TWF1-208ENST00000548403 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
TWF1-208ENST00000548403 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
TWF1-208ENST00000548403 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
TWF1-208ENST00000548403 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
TWF1-208ENST00000548403 EIF4G1Q04637 1599 aaKnown RBP26.15■■□□□ 1.78
TWF1-208ENST00000548403 DNAJC5Q9H3Z4 198 aa25.29■■□□□ 1.64
TWF1-208ENST00000548403 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
TWF1-208ENST00000548403 CUX2O14529 1486 aa25.12■■□□□ 1.61
TWF1-208ENST00000548403 ATAD2BQ9ULI0 1458 aa25.1■■□□□ 1.61
TWF1-208ENST00000548403 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
TWF1-208ENST00000548403 SMARCA4P51532 1647 aa25.08■■□□□ 1.6
TWF1-208ENST00000548403 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
TWF1-208ENST00000548403 HMGXB3Q12766 1538 aa25.04■■□□□ 1.6
TWF1-208ENST00000548403 BAZ1AQ9NRL2 1556 aaPredicted RBP24.9■■□□□ 1.58
TWF1-208ENST00000548403 NESP48681 1621 aa24.9■■□□□ 1.58
TWF1-208ENST00000548403 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
TWF1-208ENST00000548403 PEG3Q9GZU2 1588 aa24.83■■□□□ 1.57
TWF1-208ENST00000548403 THOC2Q8NI27 1593 aaKnown RBP24.72■■□□□ 1.55
TWF1-208ENST00000548403 LAMC3Q9Y6N6 1575 aa24.71■■□□□ 1.55
TWF1-208ENST00000548403 MROH2BQ7Z745 1585 aa24.69■■□□□ 1.54
TWF1-208ENST00000548403 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.53
TWF1-208ENST00000548403 PDS5BQ9NTI5 1447 aa24.53■■□□□ 1.52
TWF1-208ENST00000548403 WIZO95785 1651 aa24.42■■□□□ 1.5
TWF1-208ENST00000548403 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
TWF1-208ENST00000548403 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
TWF1-208ENST00000548403 WDR62O43379 1518 aa24.32■■□□□ 1.48
TWF1-208ENST00000548403 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
TWF1-208ENST00000548403 FANCD2Q9BXW9 1451 aa24.17■■□□□ 1.46
TWF1-208ENST00000548403 CFTRP13569 1480 aa24.12■■□□□ 1.45
TWF1-208ENST00000548403 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
TWF1-208ENST00000548403 TOP2AP11388 1531 aaKnown RBP24.09■■□□□ 1.45
TWF1-208ENST00000548403 RSF1Q96T23 1441 aaPredicted RBP24.08■■□□□ 1.44
TWF1-208ENST00000548403 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
TWF1-208ENST00000548403 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
TWF1-208ENST00000548403 OSCARQ8IYS5 282 aa23.89■■□□□ 1.41
TWF1-208ENST00000548403 CCDC88BA6NC98 1476 aa23.78■■□□□ 1.4
TWF1-208ENST00000548403 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
TWF1-208ENST00000548403 ZNF608Q9ULD9 1512 aaPredicted RBP23.72■■□□□ 1.39
TWF1-208ENST00000548403 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
TWF1-208ENST00000548403 RIMBP3CA6NJZ7 1639 aa23.69■■□□□ 1.38
TWF1-208ENST00000548403 RIMBP3BA6NNM3 1639 aa23.69■■□□□ 1.38
TWF1-208ENST00000548403 RIMBP3Q9UFD9 1639 aa23.69■■□□□ 1.38
TWF1-208ENST00000548403 EIF4G3O43432 1585 aaKnown RBP23.63■■□□□ 1.37
TWF1-208ENST00000548403 ABCC8Q09428 1581 aa23.62■■□□□ 1.37
TWF1-208ENST00000548403 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
TWF1-208ENST00000548403 ARHGEF11O15085 1522 aa23.56■■□□□ 1.36
TWF1-208ENST00000548403 TARBP1Q13395 1621 aaKnown RBP23.53■■□□□ 1.36
TWF1-208ENST00000548403 CHD1O14646 1710 aa23.52■■□□□ 1.36
TWF1-208ENST00000548403 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.358e-7■□□□□ 10.2
TWF1-208ENST00000548403 POLA1P09884 1462 aaPredicted RBP23.44■■□□□ 1.34
TWF1-208ENST00000548403 CYB5RLQ6IPT4 315 aa23.35■■□□□ 1.33
TWF1-208ENST00000548403 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
TWF1-208ENST00000548403 FBLN2P98095 1184 aa23.33■■□□□ 1.33
TWF1-208ENST00000548403 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
TWF1-208ENST00000548403 SOGA1O94964 1423 aa23.3■■□□□ 1.32
TWF1-208ENST00000548403 WDR97A6NE52 1622 aa23.28■■□□□ 1.32
TWF1-208ENST00000548403 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
TWF1-208ENST00000548403 FGD5Q6ZNL6 1462 aa23.27■■□□□ 1.32
TWF1-208ENST00000548403 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
TWF1-208ENST00000548403 CUX1P39880 1505 aa23.21■■□□□ 1.31
TWF1-208ENST00000548403 CLASP1Q7Z460 1538 aa23.19■■□□□ 1.3
TWF1-208ENST00000548403 MAGI1Q96QZ7 1491 aaPredicted RBP23.17■■□□□ 1.3
TWF1-208ENST00000548403 TRHP20396 242 aaPredicted RBP23.17■■□□□ 1.3
TWF1-208ENST00000548403 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
TWF1-208ENST00000548403 GRIN2BQ13224 1484 aa23.14■■□□□ 1.29
TWF1-208ENST00000548403 CHMP7Q8WUX9 453 aaPredicted RBP23.13■■□□□ 1.29
TWF1-208ENST00000548403 PBRM1Q86U86 1689 aa23.12■■□□□ 1.29
TWF1-208ENST00000548403 SYNJ2O15056 1496 aa23.1■■□□□ 1.29
TWF1-208ENST00000548403 GAPVD1Q14C86 1478 aa23.04■■□□□ 1.28
TWF1-208ENST00000548403 ABCA5Q8WWZ7 1642 aa23.01■■□□□ 1.27
TWF1-208ENST00000548403 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
TWF1-208ENST00000548403 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
TWF1-208ENST00000548403 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
TWF1-208ENST00000548403 SUPT5HO00267 1087 aaKnown RBP22.84■■□□□ 1.25
TWF1-208ENST00000548403 WRNQ14191 1432 aaPredicted RBP eCLIP22.83■■□□□ 1.25
TWF1-208ENST00000548403 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
TWF1-208ENST00000548403 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
TWF1-208ENST00000548403 TOP2BQ02880 1626 aa22.81■■□□□ 1.24
TWF1-208ENST00000548403 CEP170Q5SW79 1584 aa22.8■■□□□ 1.24
TWF1-208ENST00000548403 NUP160Q12769 1436 aa22.77■■□□□ 1.24
TWF1-208ENST00000548403 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
TWF1-208ENST00000548403 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
TWF1-208ENST00000548403 SHROOM2Q13796 1616 aa22.74■■□□□ 1.23
TWF1-208ENST00000548403 FHAD1B1AJZ9 1412 aa22.73■■□□□ 1.23
TWF1-208ENST00000548403 ERICH3Q5RHP9 1530 aa22.7■■□□□ 1.22
TWF1-208ENST00000548403 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
TWF1-208ENST00000548403 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms