RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 NISCHQ9Y2I1 1504 aa40.23■■■■■ 4.03
SVOP-202ENST00000548229 ABCC9O60706 1549 aa36.8■■■■□ 3.48
SVOP-202ENST00000548229 CCDC180Q9P1Z9 1646 aa36.33■■■■□ 3.41
SVOP-202ENST00000548229 DNAJC5BQ9UF47 199 aa34.97■■■■□ 3.19
SVOP-202ENST00000548229 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
SVOP-202ENST00000548229 NACADO15069 1562 aa34.53■■■■□ 3.12
SVOP-202ENST00000548229 DCAF8L2P0C7V8 631 aa34.24■■■■□ 3.07
SVOP-202ENST00000548229 PABPN1Q86U42 306 aaKnown RBP eCLIP34.2■■■■□ 3.07
SVOP-202ENST00000548229 UNC13AQ9UPW8 1703 aa33.92■■■■□ 3.02
SVOP-202ENST00000548229 MYO15BQ96JP2 1530 aa33.91■■■■□ 3.02
SVOP-202ENST00000548229 BICRAQ9NZM4 1560 aa33.77■■■■□ 3
SVOP-202ENST00000548229 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
SVOP-202ENST00000548229 CECR2Q9BXF3 1484 aa33.26■■■□□ 2.92
SVOP-202ENST00000548229 DCAF1Q9Y4B6 1507 aa33.26■■■□□ 2.91
SVOP-202ENST00000548229 CC2D2AQ9P2K1 1620 aa33.23■■■□□ 2.91
SVOP-202ENST00000548229 ZCCHC6Q5VYS8 1495 aaKnown RBP33.21■■■□□ 2.91
SVOP-202ENST00000548229 EIF4G1Q04637 1599 aaKnown RBP33.04■■■□□ 2.88
SVOP-202ENST00000548229 SCRIBQ14160 1630 aa32.99■■■□□ 2.87
SVOP-202ENST00000548229 DNAJC5Q9H3Z4 198 aa32.63■■■□□ 2.81
SVOP-202ENST00000548229 CUX2O14529 1486 aa32.03■■■□□ 2.72
SVOP-202ENST00000548229 ERCC6Q03468 1493 aa31.9■■■□□ 2.7
SVOP-202ENST00000548229 NCAPD3P42695 1498 aa31.89■■■□□ 2.7
SVOP-202ENST00000548229 ATAD2BQ9ULI0 1458 aa31.67■■■□□ 2.66
SVOP-202ENST00000548229 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
SVOP-202ENST00000548229 HMGXB3Q12766 1538 aa31.57■■■□□ 2.64
SVOP-202ENST00000548229 SMARCA4P51532 1647 aa31.46■■■□□ 2.63
SVOP-202ENST00000548229 NESP48681 1621 aa31.42■■■□□ 2.62
SVOP-202ENST00000548229 BAZ1BQ9UIG0 1483 aaKnown RBP31.35■■■□□ 2.61
SVOP-202ENST00000548229 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
SVOP-202ENST00000548229 LAMC3Q9Y6N6 1575 aa31.23■■■□□ 2.59
SVOP-202ENST00000548229 THOC2Q8NI27 1593 aaKnown RBP31.22■■■□□ 2.59
SVOP-202ENST00000548229 PEG3Q9GZU2 1588 aa31.21■■■□□ 2.59
SVOP-202ENST00000548229 PDS5BQ9NTI5 1447 aa31.14■■■□□ 2.58
SVOP-202ENST00000548229 KIF21AQ7Z4S6 1674 aa30.98■■■□□ 2.55
SVOP-202ENST00000548229 MROH2BQ7Z745 1585 aa30.94■■■□□ 2.54
SVOP-202ENST00000548229 TRIM41Q8WV44 630 aa30.93■■■□□ 2.54
SVOP-202ENST00000548229 CADPSQ9ULU8 1353 aa30.9■■■□□ 2.54
SVOP-202ENST00000548229 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.52
SVOP-202ENST00000548229 WDR62O43379 1518 aa30.74■■■□□ 2.51
SVOP-202ENST00000548229 CEP164Q9UPV0 1460 aa30.6■■■□□ 2.49
SVOP-202ENST00000548229 OSCARQ8IYS5 282 aa30.54■■■□□ 2.48
SVOP-202ENST00000548229 WIZO95785 1651 aa30.51■■■□□ 2.47
SVOP-202ENST00000548229 FANCD2Q9BXW9 1451 aa30.5■■■□□ 2.47
SVOP-202ENST00000548229 CFTRP13569 1480 aa30.41■■■□□ 2.46
SVOP-202ENST00000548229 URB2Q14146 1524 aaKnown RBP30.23■■■□□ 2.43
SVOP-202ENST00000548229 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
SVOP-202ENST00000548229 RSF1Q96T23 1441 aaPredicted RBP30.15■■■□□ 2.42
SVOP-202ENST00000548229 RIMBP3CA6NJZ7 1639 aa30.04■■■□□ 2.4
SVOP-202ENST00000548229 RIMBP3BA6NNM3 1639 aa30.04■■■□□ 2.4
SVOP-202ENST00000548229 RIMBP3Q9UFD9 1639 aa30.04■■■□□ 2.4
SVOP-202ENST00000548229 IFT140Q96RY7 1462 aa30.04■■■□□ 2.4
SVOP-202ENST00000548229 PRDM2Q13029 1718 aa29.97■■■□□ 2.39
SVOP-202ENST00000548229 ZNF608Q9ULD9 1512 aaPredicted RBP29.94■■■□□ 2.38
SVOP-202ENST00000548229 ARHGEF11O15085 1522 aa29.93■■■□□ 2.38
SVOP-202ENST00000548229 ABCC8Q09428 1581 aa29.88■■■□□ 2.37
SVOP-202ENST00000548229 TOPBP1Q92547 1522 aa29.85■■■□□ 2.37
SVOP-202ENST00000548229 CCDC88BA6NC98 1476 aa29.83■■■□□ 2.37
SVOP-202ENST00000548229 CYB5RLQ6IPT4 315 aa29.81■■■□□ 2.36
SVOP-202ENST00000548229 EIF4G3O43432 1585 aaKnown RBP29.74■■■□□ 2.35
SVOP-202ENST00000548229 DNMBPQ6XZF7 1577 aa29.7■■■□□ 2.35
SVOP-202ENST00000548229 TRHP20396 242 aaPredicted RBP29.67■■■□□ 2.34
SVOP-202ENST00000548229 AQRO60306 1485 aaKnown RBP eCLIP29.64■■■□□ 2.34
SVOP-202ENST00000548229 FBLN2P98095 1184 aa29.63■■■□□ 2.33
SVOP-202ENST00000548229 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
SVOP-202ENST00000548229 CHD1O14646 1710 aa29.59■■■□□ 2.33
SVOP-202ENST00000548229 ARAP1Q96P48 1450 aa29.57■■■□□ 2.32
SVOP-202ENST00000548229 POLA1P09884 1462 aaPredicted RBP29.51■■■□□ 2.31
SVOP-202ENST00000548229 SOGA1O94964 1423 aa29.42■■■□□ 2.3
SVOP-202ENST00000548229 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.29
SVOP-202ENST00000548229 RAD54L2Q9Y4B4 1467 aa29.37■■■□□ 2.29
SVOP-202ENST00000548229 WDR97A6NE52 1622 aa29.36■■■□□ 2.29
SVOP-202ENST00000548229 CHMP7Q8WUX9 453 aaPredicted RBP29.36■■■□□ 2.29
SVOP-202ENST00000548229 SNAPC4Q5SXM2 1469 aa29.31■■■□□ 2.28
SVOP-202ENST00000548229 CLASP1Q7Z460 1538 aa29.3■■■□□ 2.28
SVOP-202ENST00000548229 SYNJ1O43426 1573 aa29.29■■■□□ 2.28
SVOP-202ENST00000548229 MAGI1Q96QZ7 1491 aaPredicted RBP29.29■■■□□ 2.28
SVOP-202ENST00000548229 AEBP2Q6ZN18 517 aaPredicted RBP29.25■■■□□ 2.27
SVOP-202ENST00000548229 FGD5Q6ZNL6 1462 aa29.23■■■□□ 2.27
SVOP-202ENST00000548229 GRIN2BQ13224 1484 aa29.23■■■□□ 2.27
SVOP-202ENST00000548229 SYNJ2O15056 1496 aa29.18■■■□□ 2.26
SVOP-202ENST00000548229 CUX1P39880 1505 aa29.1■■■□□ 2.25
SVOP-202ENST00000548229 GAPVD1Q14C86 1478 aa29.06■■■□□ 2.24
SVOP-202ENST00000548229 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
SVOP-202ENST00000548229 ABCA10Q8WWZ4 1543 aa28.92■■■□□ 2.22
SVOP-202ENST00000548229 ABCA5Q8WWZ7 1642 aa28.86■■■□□ 2.21
SVOP-202ENST00000548229 GRIN2AQ12879 1464 aa28.81■■■□□ 2.2
SVOP-202ENST00000548229 NUP160Q12769 1436 aa28.75■■■□□ 2.19
SVOP-202ENST00000548229 WRNQ14191 1432 aaPredicted RBP eCLIP28.75■■■□□ 2.19
SVOP-202ENST00000548229 ERCC6L2Q5T890 1561 aa28.72■■■□□ 2.19
SVOP-202ENST00000548229 CEP170Q5SW79 1584 aa28.71■■■□□ 2.19
SVOP-202ENST00000548229 ADAMTS12P58397 1594 aa28.68■■■□□ 2.18
SVOP-202ENST00000548229 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
SVOP-202ENST00000548229 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
SVOP-202ENST00000548229 ERICH3Q5RHP9 1530 aa28.57■■■□□ 2.16
SVOP-202ENST00000548229 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
SVOP-202ENST00000548229 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
SVOP-202ENST00000548229 JPH4Q96JJ6 628 aa28.52■■■□□ 2.16
SVOP-202ENST00000548229 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
SVOP-202ENST00000548229 KIF13AQ9H1H9 1805 aa28.5■■■□□ 2.15
SVOP-202ENST00000548229 NPM1P06748 294 aaKnown RBP eCLIP28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms