RNA–Protein interactions for RNA: ENST00000548031.1

SCRN3-211, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-211ENST00000548031 AEBP2Q6ZN18 517 aaPredicted RBP31.63■■■□□ 2.65
SCRN3-211ENST00000548031 CHIC1Q5VXU3 224 aa29.53■■■□□ 2.32
SCRN3-211ENST00000548031 NISCHQ9Y2I1 1504 aa28.63■■■□□ 2.17
SCRN3-211ENST00000548031 SENP3Q9H4L4 574 aaPredicted RBP27.05■■□□□ 1.92
SCRN3-211ENST00000548031 PHF23Q9BUL5 403 aaPredicted RBP26.65■■□□□ 1.86
SCRN3-211ENST00000548031 ABCC9O60706 1549 aa26.23■■□□□ 1.79
SCRN3-211ENST00000548031 CCDC180Q9P1Z9 1646 aa25.93■■□□□ 1.74
SCRN3-211ENST00000548031 FOXD1Q16676 465 aa25.31■■□□□ 1.64
SCRN3-211ENST00000548031 DNAJC5BQ9UF47 199 aa24.92■■□□□ 1.58
SCRN3-211ENST00000548031 RB1CC1Q8TDY2 1594 aa24.87■■□□□ 1.57
SCRN3-211ENST00000548031 NACADO15069 1562 aa24.61■■□□□ 1.53
SCRN3-211ENST00000548031 POTEDQ86YR6 584 aa24.37■■□□□ 1.49
SCRN3-211ENST00000548031 PABPN1Q86U42 306 aaKnown RBP eCLIP24.31■■□□□ 1.48
SCRN3-211ENST00000548031 DCAF8L2P0C7V8 631 aa24.27■■□□□ 1.48
SCRN3-211ENST00000548031 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
SCRN3-211ENST00000548031 MYO15BQ96JP2 1530 aa24.17■■□□□ 1.46
SCRN3-211ENST00000548031 BICRAQ9NZM4 1560 aa24.1■■□□□ 1.45
SCRN3-211ENST00000548031 MSH5O43196 834 aa23.89■■□□□ 1.41
SCRN3-211ENST00000548031 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
SCRN3-211ENST00000548031 CC2D2AQ9P2K1 1620 aa23.71■■□□□ 1.39
SCRN3-211ENST00000548031 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
SCRN3-211ENST00000548031 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
SCRN3-211ENST00000548031 ZCCHC6Q5VYS8 1495 aaKnown RBP23.64■■□□□ 1.38
SCRN3-211ENST00000548031 PLPPR3Q6T4P5 718 aa23.57■■□□□ 1.36
SCRN3-211ENST00000548031 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
SCRN3-211ENST00000548031 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
SCRN3-211ENST00000548031 PIAS4Q8N2W9 510 aaPredicted RBP23.49■■□□□ 1.35
SCRN3-211ENST00000548031 DNAJC5Q9H3Z4 198 aa23.27■■□□□ 1.32
SCRN3-211ENST00000548031 PPP6R1Q9UPN7 881 aa23.22■■□□□ 1.31
SCRN3-211ENST00000548031 ADRA2BP18089 450 aa23.11■■□□□ 1.29
SCRN3-211ENST00000548031 CUX2O14529 1486 aa22.87■■□□□ 1.25
SCRN3-211ENST00000548031 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
SCRN3-211ENST00000548031 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
SCRN3-211ENST00000548031 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
SCRN3-211ENST00000548031 HMGXB3Q12766 1538 aa22.52■■□□□ 1.19
SCRN3-211ENST00000548031 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
SCRN3-211ENST00000548031 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
SCRN3-211ENST00000548031 NESP48681 1621 aa22.39■■□□□ 1.18
SCRN3-211ENST00000548031 BAZ1BQ9UIG0 1483 aaKnown RBP22.32■■□□□ 1.16
SCRN3-211ENST00000548031 THOC2Q8NI27 1593 aaKnown RBP22.31■■□□□ 1.16
SCRN3-211ENST00000548031 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
SCRN3-211ENST00000548031 LAMC3Q9Y6N6 1575 aa22.28■■□□□ 1.16
SCRN3-211ENST00000548031 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
SCRN3-211ENST00000548031 PDS5BQ9NTI5 1447 aa22.16■■□□□ 1.14
SCRN3-211ENST00000548031 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
SCRN3-211ENST00000548031 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
SCRN3-211ENST00000548031 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
SCRN3-211ENST00000548031 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
SCRN3-211ENST00000548031 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
SCRN3-211ENST00000548031 WDR62O43379 1518 aa21.94■■□□□ 1.1
SCRN3-211ENST00000548031 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
SCRN3-211ENST00000548031 WIZO95785 1651 aa21.72■■□□□ 1.07
SCRN3-211ENST00000548031 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
SCRN3-211ENST00000548031 OSCARQ8IYS5 282 aa21.72■■□□□ 1.07
SCRN3-211ENST00000548031 CFTRP13569 1480 aa21.64■■□□□ 1.06
SCRN3-211ENST00000548031 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
SCRN3-211ENST00000548031 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
SCRN3-211ENST00000548031 RIMBP3CA6NJZ7 1639 aa21.46■■□□□ 1.03
SCRN3-211ENST00000548031 RIMBP3BA6NNM3 1639 aa21.46■■□□□ 1.03
SCRN3-211ENST00000548031 RIMBP3Q9UFD9 1639 aa21.46■■□□□ 1.03
SCRN3-211ENST00000548031 MAPK8IP2Q13387 824 aaPredicted RBP21.42■■□□□ 1.02
SCRN3-211ENST00000548031 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
SCRN3-211ENST00000548031 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
SCRN3-211ENST00000548031 IFT140Q96RY7 1462 aa21.39■■□□□ 1.01
SCRN3-211ENST00000548031 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
SCRN3-211ENST00000548031 DMRT2Q9Y5R5 561 aa21.36■■□□□ 1.01
SCRN3-211ENST00000548031 ZNF608Q9ULD9 1512 aaPredicted RBP21.32■■□□□ 1
SCRN3-211ENST00000548031 ABCC8Q09428 1581 aa21.26■□□□□ 0.99
SCRN3-211ENST00000548031 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
SCRN3-211ENST00000548031 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
SCRN3-211ENST00000548031 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
SCRN3-211ENST00000548031 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
SCRN3-211ENST00000548031 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
SCRN3-211ENST00000548031 CHD1O14646 1710 aa21.13■□□□□ 0.97
SCRN3-211ENST00000548031 SCAF1Q9H7N4 1312 aaKnown RBP21.12■□□□□ 0.97
SCRN3-211ENST00000548031 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
SCRN3-211ENST00000548031 ARAP1Q96P48 1450 aa21.1■□□□□ 0.97
SCRN3-211ENST00000548031 TARBP1Q13395 1621 aaKnown RBP21.1■□□□□ 0.97
SCRN3-211ENST00000548031 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.97
SCRN3-211ENST00000548031 FBLN2P98095 1184 aa21.03■□□□□ 0.96
SCRN3-211ENST00000548031 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
SCRN3-211ENST00000548031 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
SCRN3-211ENST00000548031 SOGA1O94964 1423 aa20.92■□□□□ 0.94
SCRN3-211ENST00000548031 CLASP1Q7Z460 1538 aa20.9■□□□□ 0.94
SCRN3-211ENST00000548031 CACNB1Q02641 598 aaPredicted RBP20.9■□□□□ 0.94
SCRN3-211ENST00000548031 RAD54L2Q9Y4B4 1467 aa20.89■□□□□ 0.94
SCRN3-211ENST00000548031 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
SCRN3-211ENST00000548031 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
SCRN3-211ENST00000548031 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
SCRN3-211ENST00000548031 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
SCRN3-211ENST00000548031 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
SCRN3-211ENST00000548031 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
SCRN3-211ENST00000548031 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
SCRN3-211ENST00000548031 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
SCRN3-211ENST00000548031 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
SCRN3-211ENST00000548031 KCNA4P22459 653 aa20.78■□□□□ 0.92
SCRN3-211ENST00000548031 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
SCRN3-211ENST00000548031 CUX1P39880 1505 aa20.71■□□□□ 0.91
SCRN3-211ENST00000548031 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
SCRN3-211ENST00000548031 ABCA5Q8WWZ7 1642 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms