RNA–Protein interactions for RNA: ENST00000547905.5

RACGAP1-209, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-209ENST00000547905 NISCHQ9Y2I1 1504 aa23.98■■□□□ 1.43
RACGAP1-209ENST00000547905 ABCC9O60706 1549 aa22.53■■□□□ 1.2
RACGAP1-209ENST00000547905 CCDC180Q9P1Z9 1646 aa22.04■■□□□ 1.12
RACGAP1-209ENST00000547905 DNAJC5BQ9UF47 199 aa21.84■■□□□ 1.09
RACGAP1-209ENST00000547905 RB1CC1Q8TDY2 1594 aa21.35■■□□□ 1.01
RACGAP1-209ENST00000547905 NACADO15069 1562 aa21.06■□□□□ 0.96
RACGAP1-209ENST00000547905 DNAJC5Q9H3Z4 198 aa20.96■□□□□ 0.95
RACGAP1-209ENST00000547905 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
RACGAP1-209ENST00000547905 SHROOM4Q9ULL8 1493 aa20.66■□□□□ 0.9
RACGAP1-209ENST00000547905 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
RACGAP1-209ENST00000547905 UNC13AQ9UPW8 1703 aa20.63■□□□□ 0.89
RACGAP1-209ENST00000547905 BICRAQ9NZM4 1560 aa20.62■□□□□ 0.89
RACGAP1-209ENST00000547905 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
RACGAP1-209ENST00000547905 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
RACGAP1-209ENST00000547905 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
RACGAP1-209ENST00000547905 EIF4G1Q04637 1599 aaKnown RBP20.2■□□□□ 0.82
RACGAP1-209ENST00000547905 CUX2O14529 1486 aa20.11■□□□□ 0.81
RACGAP1-209ENST00000547905 DCAF1Q9Y4B6 1507 aa19.98■□□□□ 0.79
RACGAP1-209ENST00000547905 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
RACGAP1-209ENST00000547905 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
RACGAP1-209ENST00000547905 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
RACGAP1-209ENST00000547905 NCAPD3P42695 1498 aa19.42■□□□□ 0.7
RACGAP1-209ENST00000547905 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
RACGAP1-209ENST00000547905 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
RACGAP1-209ENST00000547905 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
RACGAP1-209ENST00000547905 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
RACGAP1-209ENST00000547905 ATAD2BQ9ULI0 1458 aa19.12■□□□□ 0.65
RACGAP1-209ENST00000547905 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
RACGAP1-209ENST00000547905 NESP48681 1621 aa19.06■□□□□ 0.64
RACGAP1-209ENST00000547905 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
RACGAP1-209ENST00000547905 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
RACGAP1-209ENST00000547905 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
RACGAP1-209ENST00000547905 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
RACGAP1-209ENST00000547905 MRC2Q9UBG0 1479 aa18.86■□□□□ 0.61
RACGAP1-209ENST00000547905 KIF21AQ7Z4S6 1674 aa18.86■□□□□ 0.61
RACGAP1-209ENST00000547905 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
RACGAP1-209ENST00000547905 WDR62O43379 1518 aa18.85■□□□□ 0.61
RACGAP1-209ENST00000547905 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
RACGAP1-209ENST00000547905 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
RACGAP1-209ENST00000547905 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
RACGAP1-209ENST00000547905 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
RACGAP1-209ENST00000547905 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
RACGAP1-209ENST00000547905 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
RACGAP1-209ENST00000547905 CEP164Q9UPV0 1460 aa18.57■□□□□ 0.56
RACGAP1-209ENST00000547905 ARHGEF11O15085 1522 aa18.55■□□□□ 0.56
RACGAP1-209ENST00000547905 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
RACGAP1-209ENST00000547905 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
RACGAP1-209ENST00000547905 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
RACGAP1-209ENST00000547905 CYB5RLQ6IPT4 315 aa18.34■□□□□ 0.53
RACGAP1-209ENST00000547905 CFTRP13569 1480 aa18.33■□□□□ 0.52
RACGAP1-209ENST00000547905 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.52
RACGAP1-209ENST00000547905 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
RACGAP1-209ENST00000547905 URB2Q14146 1524 aaKnown RBP18.29■□□□□ 0.52
RACGAP1-209ENST00000547905 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
RACGAP1-209ENST00000547905 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
RACGAP1-209ENST00000547905 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
RACGAP1-209ENST00000547905 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
RACGAP1-209ENST00000547905 EIF4G3O43432 1585 aaKnown RBP18.06■□□□□ 0.48
RACGAP1-209ENST00000547905 CHD1O14646 1710 aa18.05■□□□□ 0.48
RACGAP1-209ENST00000547905 WIZO95785 1651 aa18.01■□□□□ 0.47
RACGAP1-209ENST00000547905 TOPBP1Q92547 1522 aa17.99■□□□□ 0.47
RACGAP1-209ENST00000547905 CLASP1Q7Z460 1538 aa17.97■□□□□ 0.47
RACGAP1-209ENST00000547905 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
RACGAP1-209ENST00000547905 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
RACGAP1-209ENST00000547905 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
RACGAP1-209ENST00000547905 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
RACGAP1-209ENST00000547905 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
RACGAP1-209ENST00000547905 ILDR1Q86SU0 546 aaPredicted RBP17.87■□□□□ 0.45
RACGAP1-209ENST00000547905 AQRO60306 1485 aaKnown RBP eCLIP17.85■□□□□ 0.451e-6■■■■□ 20
RACGAP1-209ENST00000547905 FBLN2P98095 1184 aa17.83■□□□□ 0.44
RACGAP1-209ENST00000547905 MAGI1Q96QZ7 1491 aaPredicted RBP17.81■□□□□ 0.44
RACGAP1-209ENST00000547905 GAPVD1Q14C86 1478 aa17.79■□□□□ 0.44
RACGAP1-209ENST00000547905 CHMP7Q8WUX9 453 aaPredicted RBP17.73■□□□□ 0.43
RACGAP1-209ENST00000547905 POLA1P09884 1462 aaPredicted RBP17.72■□□□□ 0.43
RACGAP1-209ENST00000547905 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
RACGAP1-209ENST00000547905 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
RACGAP1-209ENST00000547905 GRIN2BQ13224 1484 aa17.67■□□□□ 0.42
RACGAP1-209ENST00000547905 SOGA1O94964 1423 aa17.65■□□□□ 0.42
RACGAP1-209ENST00000547905 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
RACGAP1-209ENST00000547905 TDRD9Q8NDG6 1382 aaKnown RBP17.6■□□□□ 0.41
RACGAP1-209ENST00000547905 KIF13AQ9H1H9 1805 aa17.56■□□□□ 0.4
RACGAP1-209ENST00000547905 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
RACGAP1-209ENST00000547905 KDM4FA0A1W2PPD8 638 aa17.55■□□□□ 0.4
RACGAP1-209ENST00000547905 ERCC6L2Q5T890 1561 aa17.52■□□□□ 0.4
RACGAP1-209ENST00000547905 ABCC10Q5T3U5 1492 aa17.49■□□□□ 0.39
RACGAP1-209ENST00000547905 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
RACGAP1-209ENST00000547905 SHROOM2Q13796 1616 aa17.45■□□□□ 0.38
RACGAP1-209ENST00000547905 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
RACGAP1-209ENST00000547905 MAPKBP1O60336 1514 aa17.44■□□□□ 0.38
RACGAP1-209ENST00000547905 PBRM1Q86U86 1689 aa17.43■□□□□ 0.38
RACGAP1-209ENST00000547905 NUP160Q12769 1436 aa17.43■□□□□ 0.38
RACGAP1-209ENST00000547905 KDM6BO15054 1643 aa17.42■□□□□ 0.38
RACGAP1-209ENST00000547905 GRIN2AQ12879 1464 aa17.39■□□□□ 0.37
RACGAP1-209ENST00000547905 FAM69CQ0P6D2 419 aa17.38■□□□□ 0.37
RACGAP1-209ENST00000547905 FBXO41Q8TF61 875 aa17.36■□□□□ 0.37
RACGAP1-209ENST00000547905 DIP2BQ9P265 1576 aa17.35■□□□□ 0.37
RACGAP1-209ENST00000547905 NPM1P06748 294 aaKnown RBP eCLIP17.35■□□□□ 0.37
RACGAP1-209ENST00000547905 ABCA5Q8WWZ7 1642 aa17.34■□□□□ 0.37
RACGAP1-209ENST00000547905 ABCA10Q8WWZ4 1543 aa17.34■□□□□ 0.37
RACGAP1-209ENST00000547905 CUX1P39880 1505 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms