RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 NISCHQ9Y2I1 1504 aa24.14■■□□□ 1.45
CDK4-205ENST00000547853 ABCC9O60706 1549 aa22.35■■□□□ 1.17
CDK4-205ENST00000547853 CCDC180Q9P1Z9 1646 aa22.05■■□□□ 1.12
CDK4-205ENST00000547853 DNAJC5BQ9UF47 199 aa21.34■■□□□ 1.01
CDK4-205ENST00000547853 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
CDK4-205ENST00000547853 NACADO15069 1562 aa20.84■□□□□ 0.93
CDK4-205ENST00000547853 UNC13AQ9UPW8 1703 aa20.82■□□□□ 0.92
CDK4-205ENST00000547853 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
CDK4-205ENST00000547853 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.89
CDK4-205ENST00000547853 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
CDK4-205ENST00000547853 CC2D2AQ9P2K1 1620 aa20.25■□□□□ 0.83
CDK4-205ENST00000547853 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
CDK4-205ENST00000547853 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
CDK4-205ENST00000547853 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
CDK4-205ENST00000547853 EIF4G1Q04637 1599 aaKnown RBP20.09■□□□□ 0.81
CDK4-205ENST00000547853 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
CDK4-205ENST00000547853 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
CDK4-205ENST00000547853 DCAF1Q9Y4B6 1507 aa19.96■□□□□ 0.79
CDK4-205ENST00000547853 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
CDK4-205ENST00000547853 CUX2O14529 1486 aa19.52■□□□□ 0.72
CDK4-205ENST00000547853 ERCC6Q03468 1493 aa19.3■□□□□ 0.68
CDK4-205ENST00000547853 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
CDK4-205ENST00000547853 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
CDK4-205ENST00000547853 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
CDK4-205ENST00000547853 NESP48681 1621 aa19.08■□□□□ 0.65
CDK4-205ENST00000547853 ATAD2BQ9ULI0 1458 aa19.07■□□□□ 0.64
CDK4-205ENST00000547853 SMARCA2P51531 1590 aa19.02■□□□□ 0.64
CDK4-205ENST00000547853 SMARCA4P51532 1647 aa19.02■□□□□ 0.64
CDK4-205ENST00000547853 KIF21AQ7Z4S6 1674 aa18.96■□□□□ 0.63
CDK4-205ENST00000547853 LAMC3Q9Y6N6 1575 aa18.91■□□□□ 0.62
CDK4-205ENST00000547853 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
CDK4-205ENST00000547853 BAZ1BQ9UIG0 1483 aaKnown RBP18.85■□□□□ 0.61
CDK4-205ENST00000547853 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
CDK4-205ENST00000547853 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
CDK4-205ENST00000547853 WDR62O43379 1518 aa18.7■□□□□ 0.58
CDK4-205ENST00000547853 PDS5BQ9NTI5 1447 aa18.69■□□□□ 0.58
CDK4-205ENST00000547853 MRC2Q9UBG0 1479 aa18.66■□□□□ 0.58
CDK4-205ENST00000547853 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
CDK4-205ENST00000547853 CADPSQ9ULU8 1353 aa18.52■□□□□ 0.55
CDK4-205ENST00000547853 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
CDK4-205ENST00000547853 RIMBP3CA6NJZ7 1639 aa18.42■□□□□ 0.54
CDK4-205ENST00000547853 RIMBP3BA6NNM3 1639 aa18.42■□□□□ 0.54
CDK4-205ENST00000547853 RIMBP3Q9UFD9 1639 aa18.42■□□□□ 0.54
CDK4-205ENST00000547853 WIZO95785 1651 aa18.39■□□□□ 0.53
CDK4-205ENST00000547853 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
CDK4-205ENST00000547853 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
CDK4-205ENST00000547853 URB2Q14146 1524 aaKnown RBP18.31■□□□□ 0.52
CDK4-205ENST00000547853 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
CDK4-205ENST00000547853 CFTRP13569 1480 aa18.27■□□□□ 0.52
CDK4-205ENST00000547853 ARHGEF11O15085 1522 aa18.27■□□□□ 0.51
CDK4-205ENST00000547853 ZNF608Q9ULD9 1512 aaPredicted RBP18.14■□□□□ 0.49
CDK4-205ENST00000547853 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
CDK4-205ENST00000547853 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
CDK4-205ENST00000547853 CHD1O14646 1710 aa18.12■□□□□ 0.49
CDK4-205ENST00000547853 IFT140Q96RY7 1462 aa18.09■□□□□ 0.49
CDK4-205ENST00000547853 ARAP1Q96P48 1450 aa18.06■□□□□ 0.48
CDK4-205ENST00000547853 TOPBP1Q92547 1522 aa18■□□□□ 0.47
CDK4-205ENST00000547853 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
CDK4-205ENST00000547853 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
CDK4-205ENST00000547853 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
CDK4-205ENST00000547853 CYB5RLQ6IPT4 315 aa17.93■□□□□ 0.46
CDK4-205ENST00000547853 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
CDK4-205ENST00000547853 CLASP1Q7Z460 1538 aa17.86■□□□□ 0.45
CDK4-205ENST00000547853 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
CDK4-205ENST00000547853 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.45
CDK4-205ENST00000547853 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
CDK4-205ENST00000547853 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
CDK4-205ENST00000547853 WDR97A6NE52 1622 aa17.75■□□□□ 0.43
CDK4-205ENST00000547853 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
CDK4-205ENST00000547853 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
CDK4-205ENST00000547853 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
CDK4-205ENST00000547853 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
CDK4-205ENST00000547853 FBLN2P98095 1184 aa17.66■□□□□ 0.42
CDK4-205ENST00000547853 MAGI1Q96QZ7 1491 aaPredicted RBP17.65■□□□□ 0.42
CDK4-205ENST00000547853 PBRM1Q86U86 1689 aa17.64■□□□□ 0.41
CDK4-205ENST00000547853 TDRD9Q8NDG6 1382 aaKnown RBP17.6■□□□□ 0.41
CDK4-205ENST00000547853 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
CDK4-205ENST00000547853 SYNJ2O15056 1496 aa17.58■□□□□ 0.41
CDK4-205ENST00000547853 GAPVD1Q14C86 1478 aa17.58■□□□□ 0.41
CDK4-205ENST00000547853 SOGA1O94964 1423 aa17.57■□□□□ 0.4
CDK4-205ENST00000547853 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
CDK4-205ENST00000547853 CUX1P39880 1505 aa17.53■□□□□ 0.4
CDK4-205ENST00000547853 KIF13AQ9H1H9 1805 aa17.52■□□□□ 0.4
CDK4-205ENST00000547853 ERCC6L2Q5T890 1561 aa17.51■□□□□ 0.39
CDK4-205ENST00000547853 ABCA5Q8WWZ7 1642 aa17.5■□□□□ 0.39
CDK4-205ENST00000547853 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
CDK4-205ENST00000547853 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
CDK4-205ENST00000547853 CEP170Q5SW79 1584 aa17.41■□□□□ 0.38
CDK4-205ENST00000547853 ADAMTS12P58397 1594 aa17.4■□□□□ 0.38
CDK4-205ENST00000547853 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
CDK4-205ENST00000547853 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
CDK4-205ENST00000547853 NUP160Q12769 1436 aa17.34■□□□□ 0.37
CDK4-205ENST00000547853 DIP2BQ9P265 1576 aa17.25■□□□□ 0.35
CDK4-205ENST00000547853 MAPKBP1O60336 1514 aa17.21■□□□□ 0.34
CDK4-205ENST00000547853 ABCC10Q5T3U5 1492 aa17.19■□□□□ 0.34
CDK4-205ENST00000547853 KDM6BO15054 1643 aa17.19■□□□□ 0.34
CDK4-205ENST00000547853 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
CDK4-205ENST00000547853 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
CDK4-205ENST00000547853 ADCY10Q96PN6 1610 aa17.17■□□□□ 0.34
CDK4-205ENST00000547853 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms