RNA–Protein interactions for RNA: ENST00000547842.1

DDX23-205, Transcript of DEAD-box helicase 23, humanhuman

TSL 4

Gene DDX23, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-205ENST00000547842 NISCHQ9Y2I1 1504 aa35.1■■■■□ 3.21
DDX23-205ENST00000547842 ABCC9O60706 1549 aa31.96■■■□□ 2.71
DDX23-205ENST00000547842 CCDC180Q9P1Z9 1646 aa31.56■■■□□ 2.64
DDX23-205ENST00000547842 DNAJC5BQ9UF47 199 aa30.37■■■□□ 2.45
DDX23-205ENST00000547842 RB1CC1Q8TDY2 1594 aa30.25■■■□□ 2.43
DDX23-205ENST00000547842 NACADO15069 1562 aa29.98■■■□□ 2.39
DDX23-205ENST00000547842 DCAF8L2P0C7V8 631 aa29.88■■■□□ 2.37
DDX23-205ENST00000547842 PABPN1Q86U42 306 aaKnown RBP eCLIP29.78■■■□□ 2.36
DDX23-205ENST00000547842 UNC13AQ9UPW8 1703 aa29.48■■■□□ 2.31
DDX23-205ENST00000547842 MYO15BQ96JP2 1530 aa29.48■■■□□ 2.31
DDX23-205ENST00000547842 BICRAQ9NZM4 1560 aa29.38■■■□□ 2.29
DDX23-205ENST00000547842 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
DDX23-205ENST00000547842 DCAF1Q9Y4B6 1507 aa28.97■■■□□ 2.23
DDX23-205ENST00000547842 SHROOM4Q9ULL8 1493 aa28.95■■■□□ 2.22
DDX23-205ENST00000547842 CECR2Q9BXF3 1484 aa28.84■■■□□ 2.21
DDX23-205ENST00000547842 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
DDX23-205ENST00000547842 SCRIBQ14160 1630 aa28.73■■■□□ 2.19
DDX23-205ENST00000547842 EIF4G1Q04637 1599 aaKnown RBP28.68■■■□□ 2.18
DDX23-205ENST00000547842 DNAJC5Q9H3Z4 198 aa28.15■■■□□ 2.1
DDX23-205ENST00000547842 NCAPD3P42695 1498 aa27.74■■■□□ 2.03
DDX23-205ENST00000547842 CUX2O14529 1486 aa27.69■■■□□ 2.02
DDX23-205ENST00000547842 ERCC6Q03468 1493 aa27.62■■■□□ 2.01
DDX23-205ENST00000547842 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
DDX23-205ENST00000547842 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
DDX23-205ENST00000547842 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
DDX23-205ENST00000547842 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
DDX23-205ENST00000547842 NESP48681 1621 aa27.35■■□□□ 1.97
DDX23-205ENST00000547842 BAZ1BQ9UIG0 1483 aaKnown RBP27.26■■□□□ 1.95
DDX23-205ENST00000547842 BAZ1AQ9NRL2 1556 aaPredicted RBP27.24■■□□□ 1.95
DDX23-205ENST00000547842 PEG3Q9GZU2 1588 aa27.16■■□□□ 1.94
DDX23-205ENST00000547842 LAMC3Q9Y6N6 1575 aa27.09■■□□□ 1.93
DDX23-205ENST00000547842 THOC2Q8NI27 1593 aaKnown RBP27.08■■□□□ 1.93
DDX23-205ENST00000547842 MROH2BQ7Z745 1585 aa27.03■■□□□ 1.92
DDX23-205ENST00000547842 PDS5BQ9NTI5 1447 aa27.01■■□□□ 1.91
DDX23-205ENST00000547842 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
DDX23-205ENST00000547842 CADPSQ9ULU8 1353 aa26.88■■□□□ 1.89
DDX23-205ENST00000547842 MRC2Q9UBG0 1479 aa26.75■■□□□ 1.87
DDX23-205ENST00000547842 TRIM41Q8WV44 630 aa26.74■■□□□ 1.87
DDX23-205ENST00000547842 WDR62O43379 1518 aa26.67■■□□□ 1.86
DDX23-205ENST00000547842 WIZO95785 1651 aa26.66■■□□□ 1.86
DDX23-205ENST00000547842 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.85
DDX23-205ENST00000547842 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
DDX23-205ENST00000547842 CFTRP13569 1480 aa26.49■■□□□ 1.83
DDX23-205ENST00000547842 OSCARQ8IYS5 282 aa26.47■■□□□ 1.83
DDX23-205ENST00000547842 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.81
DDX23-205ENST00000547842 URB2Q14146 1524 aaKnown RBP26.32■■□□□ 1.8
DDX23-205ENST00000547842 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
DDX23-205ENST00000547842 IFT140Q96RY7 1462 aa26.08■■□□□ 1.77
DDX23-205ENST00000547842 CCDC88BA6NC98 1476 aa26.07■■□□□ 1.76
DDX23-205ENST00000547842 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
DDX23-205ENST00000547842 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
DDX23-205ENST00000547842 RIMBP3CA6NJZ7 1639 aa26.01■■□□□ 1.75
DDX23-205ENST00000547842 RIMBP3BA6NNM3 1639 aa26.01■■□□□ 1.75
DDX23-205ENST00000547842 RIMBP3Q9UFD9 1639 aa26.01■■□□□ 1.75
DDX23-205ENST00000547842 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
DDX23-205ENST00000547842 ABCC8Q09428 1581 aa25.95■■□□□ 1.75
DDX23-205ENST00000547842 ARHGEF11O15085 1522 aa25.93■■□□□ 1.74
DDX23-205ENST00000547842 CYB5RLQ6IPT4 315 aa25.87■■□□□ 1.73
DDX23-205ENST00000547842 DNMBPQ6XZF7 1577 aa25.83■■□□□ 1.73
DDX23-205ENST00000547842 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
DDX23-205ENST00000547842 AQRO60306 1485 aaKnown RBP eCLIP25.82■■□□□ 1.725e-7■■■■■ 36.6
DDX23-205ENST00000547842 FBLN2P98095 1184 aa25.76■■□□□ 1.71
DDX23-205ENST00000547842 TARBP1Q13395 1621 aaKnown RBP25.76■■□□□ 1.71
DDX23-205ENST00000547842 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
DDX23-205ENST00000547842 CHD1O14646 1710 aa25.68■■□□□ 1.7
DDX23-205ENST00000547842 TRHP20396 242 aaPredicted RBP25.67■■□□□ 1.7
DDX23-205ENST00000547842 ARAP1Q96P48 1450 aa25.65■■□□□ 1.7
DDX23-205ENST00000547842 SOGA1O94964 1423 aa25.63■■□□□ 1.69
DDX23-205ENST00000547842 RAD54L2Q9Y4B4 1467 aa25.63■■□□□ 1.69
DDX23-205ENST00000547842 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
DDX23-205ENST00000547842 CHMP7Q8WUX9 453 aaPredicted RBP25.53■■□□□ 1.68
DDX23-205ENST00000547842 SNAPC4Q5SXM2 1469 aa25.49■■□□□ 1.67
DDX23-205ENST00000547842 FGD5Q6ZNL6 1462 aa25.48■■□□□ 1.67
DDX23-205ENST00000547842 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
DDX23-205ENST00000547842 MAGI1Q96QZ7 1491 aaPredicted RBP25.43■■□□□ 1.66
DDX23-205ENST00000547842 CLASP1Q7Z460 1538 aa25.42■■□□□ 1.66
DDX23-205ENST00000547842 GRIN2BQ13224 1484 aa25.41■■□□□ 1.66
DDX23-205ENST00000547842 CUX1P39880 1505 aa25.41■■□□□ 1.66
DDX23-205ENST00000547842 SYNJ1O43426 1573 aa25.39■■□□□ 1.66
DDX23-205ENST00000547842 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
DDX23-205ENST00000547842 GAPVD1Q14C86 1478 aa25.28■■□□□ 1.64
DDX23-205ENST00000547842 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
DDX23-205ENST00000547842 PBRM1Q86U86 1689 aa25.18■■□□□ 1.62
DDX23-205ENST00000547842 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
DDX23-205ENST00000547842 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
DDX23-205ENST00000547842 GRIN2AQ12879 1464 aa25.07■■□□□ 1.6
DDX23-205ENST00000547842 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
DDX23-205ENST00000547842 SUPT5HO00267 1087 aaKnown RBP25.03■■□□□ 1.6
DDX23-205ENST00000547842 ERCC6L2Q5T890 1561 aa25.01■■□□□ 1.59
DDX23-205ENST00000547842 NUP160Q12769 1436 aa25.01■■□□□ 1.59
DDX23-205ENST00000547842 CEP170Q5SW79 1584 aa24.96■■□□□ 1.59
DDX23-205ENST00000547842 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.59
DDX23-205ENST00000547842 ADAMTS12P58397 1594 aa24.94■■□□□ 1.58
DDX23-205ENST00000547842 TOP2BQ02880 1626 aa24.9■■□□□ 1.58
DDX23-205ENST00000547842 SHROOM2Q13796 1616 aa24.88■■□□□ 1.57
DDX23-205ENST00000547842 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
DDX23-205ENST00000547842 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
DDX23-205ENST00000547842 JPH4Q96JJ6 628 aa24.85■■□□□ 1.57
DDX23-205ENST00000547842 PRG4Q92954 1404 aaPredicted RBP24.82■■□□□ 1.56
DDX23-205ENST00000547842 NPM1P06748 294 aaKnown RBP eCLIP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms