RNA–Protein interactions for RNA: ENST00000547606.1

C12orf49-202, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 3

Gene C12orf49, Length 492 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-202ENST00000547606 NISCHQ9Y2I1 1504 aa31.92■■■□□ 2.7
C12orf49-202ENST00000547606 ABCC9O60706 1549 aa28.99■■■□□ 2.23
C12orf49-202ENST00000547606 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
C12orf49-202ENST00000547606 DNAJC5BQ9UF47 199 aa27.81■■■□□ 2.04
C12orf49-202ENST00000547606 RB1CC1Q8TDY2 1594 aa27.26■■□□□ 1.95
C12orf49-202ENST00000547606 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
C12orf49-202ENST00000547606 NACADO15069 1562 aa26.84■■□□□ 1.89
C12orf49-202ENST00000547606 PABPN1Q86U42 306 aaKnown RBP eCLIP26.8■■□□□ 1.88
C12orf49-202ENST00000547606 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
C12orf49-202ENST00000547606 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
C12orf49-202ENST00000547606 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
C12orf49-202ENST00000547606 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.82
C12orf49-202ENST00000547606 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
C12orf49-202ENST00000547606 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.78
C12orf49-202ENST00000547606 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
C12orf49-202ENST00000547606 DNAJC5Q9H3Z4 198 aa26.04■■□□□ 1.76
C12orf49-202ENST00000547606 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
C12orf49-202ENST00000547606 SCRIBQ14160 1630 aa25.92■■□□□ 1.74
C12orf49-202ENST00000547606 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
C12orf49-202ENST00000547606 CUX2O14529 1486 aa25.25■■□□□ 1.63
C12orf49-202ENST00000547606 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
C12orf49-202ENST00000547606 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
C12orf49-202ENST00000547606 BAZ1AQ9NRL2 1556 aaPredicted RBP24.73■■□□□ 1.55
C12orf49-202ENST00000547606 NCAPD3P42695 1498 aa24.72■■□□□ 1.55
C12orf49-202ENST00000547606 NESP48681 1621 aa24.7■■□□□ 1.54
C12orf49-202ENST00000547606 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
C12orf49-202ENST00000547606 THOC2Q8NI27 1593 aaKnown RBP24.66■■□□□ 1.54
C12orf49-202ENST00000547606 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
C12orf49-202ENST00000547606 ATAD2BQ9ULI0 1458 aa24.58■■□□□ 1.53
C12orf49-202ENST00000547606 HMGXB3Q12766 1538 aa24.55■■□□□ 1.52
C12orf49-202ENST00000547606 SMARCA2P51531 1590 aa24.54■■□□□ 1.52
C12orf49-202ENST00000547606 KIF21AQ7Z4S6 1674 aa24.48■■□□□ 1.51
C12orf49-202ENST00000547606 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
C12orf49-202ENST00000547606 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
C12orf49-202ENST00000547606 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.5
C12orf49-202ENST00000547606 WIZO95785 1651 aa24.39■■□□□ 1.49
C12orf49-202ENST00000547606 RSF1Q96T23 1441 aaPredicted RBP24.38■■□□□ 1.49
C12orf49-202ENST00000547606 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
C12orf49-202ENST00000547606 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
C12orf49-202ENST00000547606 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
C12orf49-202ENST00000547606 WDR62O43379 1518 aa24.07■■□□□ 1.44
C12orf49-202ENST00000547606 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
C12orf49-202ENST00000547606 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
C12orf49-202ENST00000547606 OSCARQ8IYS5 282 aa23.89■■□□□ 1.41
C12orf49-202ENST00000547606 RIMBP3CA6NJZ7 1639 aa23.87■■□□□ 1.41
C12orf49-202ENST00000547606 RIMBP3BA6NNM3 1639 aa23.87■■□□□ 1.41
C12orf49-202ENST00000547606 RIMBP3Q9UFD9 1639 aa23.87■■□□□ 1.41
C12orf49-202ENST00000547606 CEP164Q9UPV0 1460 aa23.85■■□□□ 1.41
C12orf49-202ENST00000547606 CCDC88BA6NC98 1476 aa23.84■■□□□ 1.41
C12orf49-202ENST00000547606 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
C12orf49-202ENST00000547606 CFTRP13569 1480 aa23.7■■□□□ 1.38
C12orf49-202ENST00000547606 ARHGEF11O15085 1522 aa23.64■■□□□ 1.37
C12orf49-202ENST00000547606 URB2Q14146 1524 aaKnown RBP23.62■■□□□ 1.37
C12orf49-202ENST00000547606 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
C12orf49-202ENST00000547606 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
C12orf49-202ENST00000547606 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
C12orf49-202ENST00000547606 CYB5RLQ6IPT4 315 aa23.44■■□□□ 1.34
C12orf49-202ENST00000547606 CHD1O14646 1710 aa23.42■■□□□ 1.34
C12orf49-202ENST00000547606 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
C12orf49-202ENST00000547606 ARAP1Q96P48 1450 aa23.35■■□□□ 1.33
C12orf49-202ENST00000547606 IFT140Q96RY7 1462 aa23.35■■□□□ 1.33
C12orf49-202ENST00000547606 AEBP2Q6ZN18 517 aaPredicted RBP23.32■■□□□ 1.32
C12orf49-202ENST00000547606 TOPBP1Q92547 1522 aa23.22■■□□□ 1.31
C12orf49-202ENST00000547606 DNMBPQ6XZF7 1577 aa23.19■■□□□ 1.3
C12orf49-202ENST00000547606 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
C12orf49-202ENST00000547606 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
C12orf49-202ENST00000547606 CUX1P39880 1505 aa23.1■■□□□ 1.29
C12orf49-202ENST00000547606 AQRO60306 1485 aaKnown RBP eCLIP23.1■■□□□ 1.29
C12orf49-202ENST00000547606 FBLN2P98095 1184 aa23.09■■□□□ 1.29
C12orf49-202ENST00000547606 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
C12orf49-202ENST00000547606 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
C12orf49-202ENST00000547606 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
C12orf49-202ENST00000547606 CLASP1Q7Z460 1538 aa22.99■■□□□ 1.27
C12orf49-202ENST00000547606 RAD54L2Q9Y4B4 1467 aa22.96■■□□□ 1.27
C12orf49-202ENST00000547606 SYNJ1O43426 1573 aa22.95■■□□□ 1.26
C12orf49-202ENST00000547606 SOGA1O94964 1423 aa22.94■■□□□ 1.26
C12orf49-202ENST00000547606 TOP2BQ02880 1626 aa22.92■■□□□ 1.26
C12orf49-202ENST00000547606 BIVM-ERCC5R4GMW8 1640 aa22.91■■□□□ 1.26
C12orf49-202ENST00000547606 SNAPC4Q5SXM2 1469 aa22.88■■□□□ 1.25
C12orf49-202ENST00000547606 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
C12orf49-202ENST00000547606 WDR97A6NE52 1622 aa22.78■■□□□ 1.24
C12orf49-202ENST00000547606 ABCA10Q8WWZ4 1543 aa22.76■■□□□ 1.23
C12orf49-202ENST00000547606 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
C12orf49-202ENST00000547606 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
C12orf49-202ENST00000547606 CHMP7Q8WUX9 453 aaPredicted RBP22.74■■□□□ 1.23
C12orf49-202ENST00000547606 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
C12orf49-202ENST00000547606 SYNJ2O15056 1496 aa22.68■■□□□ 1.22
C12orf49-202ENST00000547606 ABCA5Q8WWZ7 1642 aa22.67■■□□□ 1.22
C12orf49-202ENST00000547606 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
C12orf49-202ENST00000547606 KIF13AQ9H1H9 1805 aa22.65■■□□□ 1.22
C12orf49-202ENST00000547606 ERCC6L2Q5T890 1561 aa22.62■■□□□ 1.21
C12orf49-202ENST00000547606 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
C12orf49-202ENST00000547606 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
C12orf49-202ENST00000547606 CEP170Q5SW79 1584 aa22.47■■□□□ 1.19
C12orf49-202ENST00000547606 ADAMTS12P58397 1594 aa22.46■■□□□ 1.19
C12orf49-202ENST00000547606 ILDR1Q86SU0 546 aaPredicted RBP22.42■■□□□ 1.18
C12orf49-202ENST00000547606 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
C12orf49-202ENST00000547606 SHROOM2Q13796 1616 aa22.4■■□□□ 1.18
C12orf49-202ENST00000547606 GRIN2AQ12879 1464 aa22.4■■□□□ 1.18
C12orf49-202ENST00000547606 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms