RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 NISCHQ9Y2I1 1504 aa25.06■■□□□ 1.6
LINC02409-201ENST00000547515 CCDC180Q9P1Z9 1646 aa22.36■■□□□ 1.17
LINC02409-201ENST00000547515 ABCC9O60706 1549 aa21.76■■□□□ 1.07
LINC02409-201ENST00000547515 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
LINC02409-201ENST00000547515 NACADO15069 1562 aa20.97■□□□□ 0.95
LINC02409-201ENST00000547515 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
LINC02409-201ENST00000547515 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
LINC02409-201ENST00000547515 DCAF8L2P0C7V8 631 aa20.81■□□□□ 0.92
LINC02409-201ENST00000547515 DCAF1Q9Y4B6 1507 aa20.77■□□□□ 0.92
LINC02409-201ENST00000547515 UNC13AQ9UPW8 1703 aa20.63■□□□□ 0.89
LINC02409-201ENST00000547515 BICRAQ9NZM4 1560 aa20.38■□□□□ 0.85
LINC02409-201ENST00000547515 SCRIBQ14160 1630 aa20.32■□□□□ 0.84
LINC02409-201ENST00000547515 PABPN1Q86U42 306 aaKnown RBP eCLIP20.29■□□□□ 0.84
LINC02409-201ENST00000547515 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
LINC02409-201ENST00000547515 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
LINC02409-201ENST00000547515 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
LINC02409-201ENST00000547515 EIF4G1Q04637 1599 aaKnown RBP19.81■□□□□ 0.76
LINC02409-201ENST00000547515 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
LINC02409-201ENST00000547515 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
LINC02409-201ENST00000547515 SMARCA4P51532 1647 aa19.47■□□□□ 0.71
LINC02409-201ENST00000547515 BAZ1AQ9NRL2 1556 aaPredicted RBP19.43■□□□□ 0.7
LINC02409-201ENST00000547515 SMARCA2P51531 1590 aa19.33■□□□□ 0.69
LINC02409-201ENST00000547515 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.68
LINC02409-201ENST00000547515 NCAPD3P42695 1498 aa19.32■□□□□ 0.68
LINC02409-201ENST00000547515 MROH2BQ7Z745 1585 aa19.31■□□□□ 0.68
LINC02409-201ENST00000547515 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
LINC02409-201ENST00000547515 HMGXB3Q12766 1538 aa19.25■□□□□ 0.67
LINC02409-201ENST00000547515 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
LINC02409-201ENST00000547515 WIZO95785 1651 aa19.13■□□□□ 0.65
LINC02409-201ENST00000547515 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
LINC02409-201ENST00000547515 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
LINC02409-201ENST00000547515 NESP48681 1621 aa18.85■□□□□ 0.61
LINC02409-201ENST00000547515 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
LINC02409-201ENST00000547515 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
LINC02409-201ENST00000547515 CADPSQ9ULU8 1353 aa18.74■□□□□ 0.59
LINC02409-201ENST00000547515 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
LINC02409-201ENST00000547515 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
LINC02409-201ENST00000547515 CCDC88BA6NC98 1476 aa18.66■□□□□ 0.58
LINC02409-201ENST00000547515 PRDM2Q13029 1718 aa18.65■□□□□ 0.58
LINC02409-201ENST00000547515 CFTRP13569 1480 aa18.65■□□□□ 0.58
LINC02409-201ENST00000547515 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
LINC02409-201ENST00000547515 CUX2O14529 1486 aa18.59■□□□□ 0.57
LINC02409-201ENST00000547515 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
LINC02409-201ENST00000547515 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
LINC02409-201ENST00000547515 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
LINC02409-201ENST00000547515 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
LINC02409-201ENST00000547515 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
LINC02409-201ENST00000547515 WDR62O43379 1518 aa18.46■□□□□ 0.55
LINC02409-201ENST00000547515 URB2Q14146 1524 aaKnown RBP18.36■□□□□ 0.53
LINC02409-201ENST00000547515 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
LINC02409-201ENST00000547515 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
LINC02409-201ENST00000547515 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
LINC02409-201ENST00000547515 IFT140Q96RY7 1462 aa18.13■□□□□ 0.49
LINC02409-201ENST00000547515 CUX1P39880 1505 aa18.11■□□□□ 0.49
LINC02409-201ENST00000547515 POLA1P09884 1462 aaPredicted RBP18.09■□□□□ 0.49
LINC02409-201ENST00000547515 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
LINC02409-201ENST00000547515 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
LINC02409-201ENST00000547515 FGD5Q6ZNL6 1462 aa18.04■□□□□ 0.48
LINC02409-201ENST00000547515 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
LINC02409-201ENST00000547515 BIVM-ERCC5R4GMW8 1640 aa18.01■□□□□ 0.47
LINC02409-201ENST00000547515 SOGA1O94964 1423 aa17.99■□□□□ 0.47
LINC02409-201ENST00000547515 DNAJC5Q9H3Z4 198 aa17.99■□□□□ 0.47
LINC02409-201ENST00000547515 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
LINC02409-201ENST00000547515 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
LINC02409-201ENST00000547515 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
LINC02409-201ENST00000547515 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
LINC02409-201ENST00000547515 SYNJ1O43426 1573 aa17.96■□□□□ 0.47
LINC02409-201ENST00000547515 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC02409-201ENST00000547515 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
LINC02409-201ENST00000547515 TDRD9Q8NDG6 1382 aaKnown RBP17.87■□□□□ 0.45
LINC02409-201ENST00000547515 PBRM1Q86U86 1689 aa17.85■□□□□ 0.45
LINC02409-201ENST00000547515 ABCA5Q8WWZ7 1642 aa17.85■□□□□ 0.45
LINC02409-201ENST00000547515 CHD1O14646 1710 aa17.84■□□□□ 0.45
LINC02409-201ENST00000547515 GRIN2BQ13224 1484 aa17.8■□□□□ 0.44
LINC02409-201ENST00000547515 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
LINC02409-201ENST00000547515 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
LINC02409-201ENST00000547515 MAGI1Q96QZ7 1491 aaPredicted RBP17.77■□□□□ 0.44
LINC02409-201ENST00000547515 OSCARQ8IYS5 282 aa17.77■□□□□ 0.44
LINC02409-201ENST00000547515 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
LINC02409-201ENST00000547515 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
LINC02409-201ENST00000547515 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
LINC02409-201ENST00000547515 FBLN2P98095 1184 aa17.65■□□□□ 0.42
LINC02409-201ENST00000547515 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
LINC02409-201ENST00000547515 CLASP1Q7Z460 1538 aa17.59■□□□□ 0.41
LINC02409-201ENST00000547515 FHAD1B1AJZ9 1412 aa17.59■□□□□ 0.41
LINC02409-201ENST00000547515 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
LINC02409-201ENST00000547515 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
LINC02409-201ENST00000547515 RIMBP3CA6NJZ7 1639 aa17.57■□□□□ 0.4
LINC02409-201ENST00000547515 RIMBP3BA6NNM3 1639 aa17.57■□□□□ 0.4
LINC02409-201ENST00000547515 RIMBP3Q9UFD9 1639 aa17.57■□□□□ 0.4
LINC02409-201ENST00000547515 CUL7Q14999 1698 aa17.55■□□□□ 0.4
LINC02409-201ENST00000547515 ARHGEF11O15085 1522 aa17.53■□□□□ 0.4
LINC02409-201ENST00000547515 IGF1RP08069 1367 aa17.52■□□□□ 0.39
LINC02409-201ENST00000547515 CEP170Q5SW79 1584 aa17.51■□□□□ 0.39
LINC02409-201ENST00000547515 NUP160Q12769 1436 aa17.5■□□□□ 0.39
LINC02409-201ENST00000547515 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
LINC02409-201ENST00000547515 RUSC2Q8N2Y8 1516 aa17.44■□□□□ 0.38
LINC02409-201ENST00000547515 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
LINC02409-201ENST00000547515 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
LINC02409-201ENST00000547515 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms