RNA–Protein interactions for RNA: ENST00000547262.1

R3HDM2-211, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 840 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-211ENST00000547262 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
R3HDM2-211ENST00000547262 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
R3HDM2-211ENST00000547262 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
R3HDM2-211ENST00000547262 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
R3HDM2-211ENST00000547262 ABCC9O60706 1549 aa21.12■□□□□ 0.97
R3HDM2-211ENST00000547262 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
R3HDM2-211ENST00000547262 RB1CC1Q8TDY2 1594 aa20.24■□□□□ 0.83
R3HDM2-211ENST00000547262 NACADO15069 1562 aa20.17■□□□□ 0.82
R3HDM2-211ENST00000547262 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
R3HDM2-211ENST00000547262 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.8
R3HDM2-211ENST00000547262 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
R3HDM2-211ENST00000547262 ZCCHC6Q5VYS8 1495 aaKnown RBP19.79■□□□□ 0.76
R3HDM2-211ENST00000547262 DCAF1Q9Y4B6 1507 aa19.78■□□□□ 0.76
R3HDM2-211ENST00000547262 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
R3HDM2-211ENST00000547262 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
R3HDM2-211ENST00000547262 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
R3HDM2-211ENST00000547262 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
R3HDM2-211ENST00000547262 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
R3HDM2-211ENST00000547262 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
R3HDM2-211ENST00000547262 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
R3HDM2-211ENST00000547262 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
R3HDM2-211ENST00000547262 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
R3HDM2-211ENST00000547262 FOXD1Q16676 465 aa19.05■□□□□ 0.64
R3HDM2-211ENST00000547262 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
R3HDM2-211ENST00000547262 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
R3HDM2-211ENST00000547262 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
R3HDM2-211ENST00000547262 SMARCA4P51532 1647 aa18.52■□□□□ 0.55
R3HDM2-211ENST00000547262 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
R3HDM2-211ENST00000547262 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
R3HDM2-211ENST00000547262 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
R3HDM2-211ENST00000547262 BAZ1BQ9UIG0 1483 aaKnown RBP18.36■□□□□ 0.53
R3HDM2-211ENST00000547262 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
R3HDM2-211ENST00000547262 CUX2O14529 1486 aa18.26■□□□□ 0.51
R3HDM2-211ENST00000547262 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
R3HDM2-211ENST00000547262 NESP48681 1621 aa18.16■□□□□ 0.5
R3HDM2-211ENST00000547262 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
R3HDM2-211ENST00000547262 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
R3HDM2-211ENST00000547262 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
R3HDM2-211ENST00000547262 DNAJC5Q9H3Z4 198 aa18.09■□□□□ 0.49
R3HDM2-211ENST00000547262 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
R3HDM2-211ENST00000547262 WIZO95785 1651 aa18.05■□□□□ 0.48
R3HDM2-211ENST00000547262 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
R3HDM2-211ENST00000547262 THOC2Q8NI27 1593 aaKnown RBP17.97■□□□□ 0.47
R3HDM2-211ENST00000547262 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
R3HDM2-211ENST00000547262 CFTRP13569 1480 aa17.89■□□□□ 0.45
R3HDM2-211ENST00000547262 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
R3HDM2-211ENST00000547262 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
R3HDM2-211ENST00000547262 MSH5O43196 834 aa17.86■□□□□ 0.45
R3HDM2-211ENST00000547262 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
R3HDM2-211ENST00000547262 WDR62O43379 1518 aa17.82■□□□□ 0.44
R3HDM2-211ENST00000547262 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
R3HDM2-211ENST00000547262 PIAS4Q8N2W9 510 aaPredicted RBP17.8■□□□□ 0.44
R3HDM2-211ENST00000547262 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
R3HDM2-211ENST00000547262 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
R3HDM2-211ENST00000547262 ADRA2BP18089 450 aa17.71■□□□□ 0.43
R3HDM2-211ENST00000547262 URB2Q14146 1524 aaKnown RBP17.63■□□□□ 0.41
R3HDM2-211ENST00000547262 PRDM2Q13029 1718 aa17.62■□□□□ 0.41
R3HDM2-211ENST00000547262 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
R3HDM2-211ENST00000547262 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
R3HDM2-211ENST00000547262 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
R3HDM2-211ENST00000547262 TOPBP1Q92547 1522 aa17.48■□□□□ 0.39
R3HDM2-211ENST00000547262 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
R3HDM2-211ENST00000547262 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
R3HDM2-211ENST00000547262 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
R3HDM2-211ENST00000547262 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
R3HDM2-211ENST00000547262 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
R3HDM2-211ENST00000547262 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
R3HDM2-211ENST00000547262 SOGA1O94964 1423 aa17.27■□□□□ 0.35
R3HDM2-211ENST00000547262 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.35
R3HDM2-211ENST00000547262 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.354e-7■■■■□ 20.6
R3HDM2-211ENST00000547262 TRIM41Q8WV44 630 aa17.23■□□□□ 0.35
R3HDM2-211ENST00000547262 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
R3HDM2-211ENST00000547262 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
R3HDM2-211ENST00000547262 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
R3HDM2-211ENST00000547262 CUX1P39880 1505 aa17.21■□□□□ 0.34
R3HDM2-211ENST00000547262 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
R3HDM2-211ENST00000547262 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
R3HDM2-211ENST00000547262 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
R3HDM2-211ENST00000547262 FBLN2P98095 1184 aa17.1■□□□□ 0.33
R3HDM2-211ENST00000547262 ARHGEF11O15085 1522 aa17.1■□□□□ 0.33
R3HDM2-211ENST00000547262 RIMBP3CA6NJZ7 1639 aa17.09■□□□□ 0.33
R3HDM2-211ENST00000547262 RIMBP3BA6NNM3 1639 aa17.09■□□□□ 0.33
R3HDM2-211ENST00000547262 RIMBP3Q9UFD9 1639 aa17.09■□□□□ 0.33
R3HDM2-211ENST00000547262 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.32
R3HDM2-211ENST00000547262 SNAPC4Q5SXM2 1469 aa17.08■□□□□ 0.32
R3HDM2-211ENST00000547262 CHMP7Q8WUX9 453 aaPredicted RBP17.06■□□□□ 0.32
R3HDM2-211ENST00000547262 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
R3HDM2-211ENST00000547262 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
R3HDM2-211ENST00000547262 CHD1O14646 1710 aa17.04■□□□□ 0.32
R3HDM2-211ENST00000547262 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
R3HDM2-211ENST00000547262 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
R3HDM2-211ENST00000547262 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
R3HDM2-211ENST00000547262 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
R3HDM2-211ENST00000547262 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
R3HDM2-211ENST00000547262 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
R3HDM2-211ENST00000547262 CLASP1Q7Z460 1538 aa16.97■□□□□ 0.31
R3HDM2-211ENST00000547262 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
R3HDM2-211ENST00000547262 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
R3HDM2-211ENST00000547262 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
R3HDM2-211ENST00000547262 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms