RNA–Protein interactions for RNA: ENST00000547249.1

ELK3-202, Transcript of ELK3, ETS transcription factor, humanhuman

TSL 2

Gene ELK3, Length 539 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELK3-202ENST00000547249 NISCHQ9Y2I1 1504 aa38.73■■■■□ 3.79
ELK3-202ENST00000547249 ABCC9O60706 1549 aa36.49■■■■□ 3.43
ELK3-202ENST00000547249 DNAJC5BQ9UF47 199 aa35.27■■■■□ 3.24
ELK3-202ENST00000547249 CCDC180Q9P1Z9 1646 aa35.2■■■■□ 3.23
ELK3-202ENST00000547249 RB1CC1Q8TDY2 1594 aa34.16■■■■□ 3.06
ELK3-202ENST00000547249 PABPN1Q86U42 306 aaKnown RBP eCLIP33.82■■■■□ 3
ELK3-202ENST00000547249 NACADO15069 1562 aa33.63■■■□□ 2.97
ELK3-202ENST00000547249 DCAF8L2P0C7V8 631 aa33.35■■■□□ 2.93
ELK3-202ENST00000547249 DNAJC5Q9H3Z4 198 aa33.3■■■□□ 2.92
ELK3-202ENST00000547249 UNC13AQ9UPW8 1703 aa33.22■■■□□ 2.91
ELK3-202ENST00000547249 BICRAQ9NZM4 1560 aa33.15■■■□□ 2.9
ELK3-202ENST00000547249 CECR2Q9BXF3 1484 aa33.01■■■□□ 2.88
ELK3-202ENST00000547249 CC2D2AQ9P2K1 1620 aa32.84■■■□□ 2.85
ELK3-202ENST00000547249 MYO15BQ96JP2 1530 aa32.76■■■□□ 2.83
ELK3-202ENST00000547249 SHROOM4Q9ULL8 1493 aa32.66■■■□□ 2.82
ELK3-202ENST00000547249 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
ELK3-202ENST00000547249 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
ELK3-202ENST00000547249 CUX2O14529 1486 aa31.94■■■□□ 2.7
ELK3-202ENST00000547249 DCAF1Q9Y4B6 1507 aa31.89■■■□□ 2.7
ELK3-202ENST00000547249 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
ELK3-202ENST00000547249 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
ELK3-202ENST00000547249 TRIM41Q8WV44 630 aa31.42■■■□□ 2.62
ELK3-202ENST00000547249 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
ELK3-202ENST00000547249 NESP48681 1621 aa30.97■■■□□ 2.55
ELK3-202ENST00000547249 THOC2Q8NI27 1593 aaKnown RBP30.85■■■□□ 2.53
ELK3-202ENST00000547249 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.53
ELK3-202ENST00000547249 HMGXB3Q12766 1538 aa30.72■■■□□ 2.51
ELK3-202ENST00000547249 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
ELK3-202ENST00000547249 LAMC3Q9Y6N6 1575 aa30.54■■■□□ 2.48
ELK3-202ENST00000547249 PDS5BQ9NTI5 1447 aa30.49■■■□□ 2.47
ELK3-202ENST00000547249 BAZ1BQ9UIG0 1483 aaKnown RBP30.49■■■□□ 2.47
ELK3-202ENST00000547249 KIF21AQ7Z4S6 1674 aa30.45■■■□□ 2.46
ELK3-202ENST00000547249 SMARCA4P51532 1647 aa30.44■■■□□ 2.46
ELK3-202ENST00000547249 OSCARQ8IYS5 282 aa30.33■■■□□ 2.45
ELK3-202ENST00000547249 BAZ1AQ9NRL2 1556 aaPredicted RBP30.32■■■□□ 2.44
ELK3-202ENST00000547249 MRC2Q9UBG0 1479 aa30.27■■■□□ 2.44
ELK3-202ENST00000547249 WDR62O43379 1518 aa30.19■■■□□ 2.42
ELK3-202ENST00000547249 PEG3Q9GZU2 1588 aa30.13■■■□□ 2.41
ELK3-202ENST00000547249 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
ELK3-202ENST00000547249 RIMBP3CA6NJZ7 1639 aa29.96■■■□□ 2.39
ELK3-202ENST00000547249 RIMBP3BA6NNM3 1639 aa29.96■■■□□ 2.39
ELK3-202ENST00000547249 RIMBP3Q9UFD9 1639 aa29.96■■■□□ 2.39
ELK3-202ENST00000547249 CEP164Q9UPV0 1460 aa29.92■■■□□ 2.38
ELK3-202ENST00000547249 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
ELK3-202ENST00000547249 MROH2BQ7Z745 1585 aa29.81■■■□□ 2.36
ELK3-202ENST00000547249 TRHP20396 242 aaPredicted RBP29.81■■■□□ 2.36
ELK3-202ENST00000547249 ARHGEF11O15085 1522 aa29.79■■■□□ 2.36
ELK3-202ENST00000547249 FANCD2Q9BXW9 1451 aa29.77■■■□□ 2.36
ELK3-202ENST00000547249 CYB5RLQ6IPT4 315 aa29.71■■■□□ 2.35
ELK3-202ENST00000547249 URB2Q14146 1524 aaKnown RBP29.56■■■□□ 2.32
ELK3-202ENST00000547249 CFTRP13569 1480 aa29.48■■■□□ 2.31
ELK3-202ENST00000547249 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
ELK3-202ENST00000547249 ZNF608Q9ULD9 1512 aaPredicted RBP29.41■■■□□ 2.3
ELK3-202ENST00000547249 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
ELK3-202ENST00000547249 WIZO95785 1651 aa29.36■■■□□ 2.29
ELK3-202ENST00000547249 RSF1Q96T23 1441 aaPredicted RBP29.23■■■□□ 2.27
ELK3-202ENST00000547249 FBLN2P98095 1184 aa29.16■■■□□ 2.26
ELK3-202ENST00000547249 EIF4G3O43432 1585 aaKnown RBP29.15■■■□□ 2.26
ELK3-202ENST00000547249 CHD1O14646 1710 aa29.11■■■□□ 2.25
ELK3-202ENST00000547249 TOPBP1Q92547 1522 aa29.04■■■□□ 2.24
ELK3-202ENST00000547249 AQRO60306 1485 aaKnown RBP eCLIP29.02■■■□□ 2.24
ELK3-202ENST00000547249 TOP2AP11388 1531 aaKnown RBP28.95■■■□□ 2.23
ELK3-202ENST00000547249 PRDM2Q13029 1718 aa28.94■■■□□ 2.22
ELK3-202ENST00000547249 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
ELK3-202ENST00000547249 DNMBPQ6XZF7 1577 aa28.82■■■□□ 2.2
ELK3-202ENST00000547249 TARBP1Q13395 1621 aaKnown RBP28.82■■■□□ 2.2
ELK3-202ENST00000547249 CLASP1Q7Z460 1538 aa28.8■■■□□ 2.2
ELK3-202ENST00000547249 CHMP7Q8WUX9 453 aaPredicted RBP28.72■■■□□ 2.19
ELK3-202ENST00000547249 SYNJ1O43426 1573 aa28.71■■■□□ 2.19
ELK3-202ENST00000547249 SNAPC4Q5SXM2 1469 aa28.69■■■□□ 2.18
ELK3-202ENST00000547249 POLA1P09884 1462 aaPredicted RBP28.68■■■□□ 2.18
ELK3-202ENST00000547249 ILDR1Q86SU0 546 aaPredicted RBP28.68■■■□□ 2.18
ELK3-202ENST00000547249 TDRD9Q8NDG6 1382 aaKnown RBP28.67■■■□□ 2.18
ELK3-202ENST00000547249 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
ELK3-202ENST00000547249 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
ELK3-202ENST00000547249 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
ELK3-202ENST00000547249 MAGI1Q96QZ7 1491 aaPredicted RBP28.56■■■□□ 2.16
ELK3-202ENST00000547249 SOGA1O94964 1423 aa28.55■■■□□ 2.16
ELK3-202ENST00000547249 SYNJ2O15056 1496 aa28.48■■■□□ 2.15
ELK3-202ENST00000547249 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
ELK3-202ENST00000547249 GRIN2BQ13224 1484 aa28.45■■■□□ 2.14
ELK3-202ENST00000547249 FGD5Q6ZNL6 1462 aa28.33■■■□□ 2.13
ELK3-202ENST00000547249 KDM4FA0A1W2PPD8 638 aa28.27■■■□□ 2.12
ELK3-202ENST00000547249 ERCC6L2Q5T890 1561 aa28.26■■■□□ 2.11
ELK3-202ENST00000547249 KIF13AQ9H1H9 1805 aa28.2■■■□□ 2.11
ELK3-202ENST00000547249 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
ELK3-202ENST00000547249 CEP170Q5SW79 1584 aa28.12■■■□□ 2.09
ELK3-202ENST00000547249 FAM69CQ0P6D2 419 aa28.12■■■□□ 2.09
ELK3-202ENST00000547249 CUX1P39880 1505 aa28.09■■■□□ 2.09
ELK3-202ENST00000547249 GRIN2AQ12879 1464 aa28.06■■■□□ 2.08
ELK3-202ENST00000547249 ABCC10Q5T3U5 1492 aa28.02■■■□□ 2.08
ELK3-202ENST00000547249 NUP160Q12769 1436 aa28.01■■■□□ 2.07
ELK3-202ENST00000547249 KDM6BO15054 1643 aa27.97■■■□□ 2.07
ELK3-202ENST00000547249 NPM1P06748 294 aaKnown RBP eCLIP27.95■■■□□ 2.06
ELK3-202ENST00000547249 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.06
ELK3-202ENST00000547249 ABCA10Q8WWZ4 1543 aa27.94■■■□□ 2.06
ELK3-202ENST00000547249 SHROOM2Q13796 1616 aa27.94■■■□□ 2.06
ELK3-202ENST00000547249 DIP2BQ9P265 1576 aa27.87■■■□□ 2.05
ELK3-202ENST00000547249 PRG4Q92954 1404 aaPredicted RBP27.87■■■□□ 2.05
ELK3-202ENST00000547249 MAPKBP1O60336 1514 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 281.1 ms