RNA–Protein interactions for RNA: ENST00000547235.5

NPIPB12-202, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 3

Gene NPIPB12, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-202ENST00000547235 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
NPIPB12-202ENST00000547235 ABCC9O60706 1549 aa21.72■■□□□ 1.07
NPIPB12-202ENST00000547235 CCDC180Q9P1Z9 1646 aa21.25■□□□□ 0.99
NPIPB12-202ENST00000547235 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
NPIPB12-202ENST00000547235 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
NPIPB12-202ENST00000547235 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
NPIPB12-202ENST00000547235 NACADO15069 1562 aa20.25■□□□□ 0.83
NPIPB12-202ENST00000547235 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
NPIPB12-202ENST00000547235 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
NPIPB12-202ENST00000547235 UNC13AQ9UPW8 1703 aa19.88■□□□□ 0.77
NPIPB12-202ENST00000547235 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
NPIPB12-202ENST00000547235 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
NPIPB12-202ENST00000547235 SHROOM4Q9ULL8 1493 aa19.66■□□□□ 0.74
NPIPB12-202ENST00000547235 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
NPIPB12-202ENST00000547235 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.72
NPIPB12-202ENST00000547235 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
NPIPB12-202ENST00000547235 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
NPIPB12-202ENST00000547235 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
NPIPB12-202ENST00000547235 DCAF1Q9Y4B6 1507 aa19.42■□□□□ 0.7
NPIPB12-202ENST00000547235 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
NPIPB12-202ENST00000547235 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
NPIPB12-202ENST00000547235 CUX2O14529 1486 aa18.96■□□□□ 0.63
NPIPB12-202ENST00000547235 ERCC6Q03468 1493 aa18.83■□□□□ 0.6
NPIPB12-202ENST00000547235 NCAPD3P42695 1498 aa18.73■□□□□ 0.59
NPIPB12-202ENST00000547235 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.57
NPIPB12-202ENST00000547235 NESP48681 1621 aa18.52■□□□□ 0.55
NPIPB12-202ENST00000547235 HMGXB3Q12766 1538 aa18.51■□□□□ 0.55
NPIPB12-202ENST00000547235 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
NPIPB12-202ENST00000547235 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
NPIPB12-202ENST00000547235 THOC2Q8NI27 1593 aaKnown RBP18.4■□□□□ 0.54
NPIPB12-202ENST00000547235 SMARCA4P51532 1647 aa18.4■□□□□ 0.54
NPIPB12-202ENST00000547235 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
NPIPB12-202ENST00000547235 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
NPIPB12-202ENST00000547235 PDS5BQ9NTI5 1447 aa18.31■□□□□ 0.52
NPIPB12-202ENST00000547235 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
NPIPB12-202ENST00000547235 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
NPIPB12-202ENST00000547235 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
NPIPB12-202ENST00000547235 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
NPIPB12-202ENST00000547235 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
NPIPB12-202ENST00000547235 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
NPIPB12-202ENST00000547235 WDR62O43379 1518 aa18.08■□□□□ 0.49
NPIPB12-202ENST00000547235 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
NPIPB12-202ENST00000547235 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
NPIPB12-202ENST00000547235 FANCD2Q9BXW9 1451 aa17.91■□□□□ 0.46
NPIPB12-202ENST00000547235 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
NPIPB12-202ENST00000547235 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
NPIPB12-202ENST00000547235 CFTRP13569 1480 aa17.82■□□□□ 0.44
NPIPB12-202ENST00000547235 WIZO95785 1651 aa17.8■□□□□ 0.44
NPIPB12-202ENST00000547235 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.44
NPIPB12-202ENST00000547235 RIMBP3CA6NJZ7 1639 aa17.76■□□□□ 0.43
NPIPB12-202ENST00000547235 RIMBP3BA6NNM3 1639 aa17.76■□□□□ 0.43
NPIPB12-202ENST00000547235 RIMBP3Q9UFD9 1639 aa17.76■□□□□ 0.43
NPIPB12-202ENST00000547235 ARHGEF11O15085 1522 aa17.69■□□□□ 0.42
NPIPB12-202ENST00000547235 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
NPIPB12-202ENST00000547235 CYB5RLQ6IPT4 315 aa17.62■□□□□ 0.41
NPIPB12-202ENST00000547235 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
NPIPB12-202ENST00000547235 TOP2AP11388 1531 aaKnown RBP17.61■□□□□ 0.41
NPIPB12-202ENST00000547235 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
NPIPB12-202ENST00000547235 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
NPIPB12-202ENST00000547235 ARAP1Q96P48 1450 aa17.49■□□□□ 0.39
NPIPB12-202ENST00000547235 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
NPIPB12-202ENST00000547235 EIF4G3O43432 1585 aaKnown RBP17.47■□□□□ 0.39
NPIPB12-202ENST00000547235 PRDM2Q13029 1718 aa17.47■□□□□ 0.39
NPIPB12-202ENST00000547235 FBLN2P98095 1184 aa17.43■□□□□ 0.38
NPIPB12-202ENST00000547235 AQRO60306 1485 aaKnown RBP eCLIP17.43■□□□□ 0.38
NPIPB12-202ENST00000547235 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
NPIPB12-202ENST00000547235 DNMBPQ6XZF7 1577 aa17.39■□□□□ 0.37
NPIPB12-202ENST00000547235 CHD1O14646 1710 aa17.38■□□□□ 0.37
NPIPB12-202ENST00000547235 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
NPIPB12-202ENST00000547235 POLA1P09884 1462 aaPredicted RBP17.3■□□□□ 0.36
NPIPB12-202ENST00000547235 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
NPIPB12-202ENST00000547235 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
NPIPB12-202ENST00000547235 CLASP1Q7Z460 1538 aa17.25■□□□□ 0.35
NPIPB12-202ENST00000547235 SOGA1O94964 1423 aa17.24■□□□□ 0.35
NPIPB12-202ENST00000547235 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
NPIPB12-202ENST00000547235 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
NPIPB12-202ENST00000547235 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
NPIPB12-202ENST00000547235 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
NPIPB12-202ENST00000547235 WDR97A6NE52 1622 aa17.2■□□□□ 0.34
NPIPB12-202ENST00000547235 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
NPIPB12-202ENST00000547235 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
NPIPB12-202ENST00000547235 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
NPIPB12-202ENST00000547235 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
NPIPB12-202ENST00000547235 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
NPIPB12-202ENST00000547235 CUX1P39880 1505 aa17.02■□□□□ 0.32
NPIPB12-202ENST00000547235 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
NPIPB12-202ENST00000547235 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
NPIPB12-202ENST00000547235 ABCA10Q8WWZ4 1543 aa16.92■□□□□ 0.3
NPIPB12-202ENST00000547235 ERCC6L2Q5T890 1561 aa16.91■□□□□ 0.3
NPIPB12-202ENST00000547235 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
NPIPB12-202ENST00000547235 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
NPIPB12-202ENST00000547235 NUP160Q12769 1436 aa16.87■□□□□ 0.29
NPIPB12-202ENST00000547235 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
NPIPB12-202ENST00000547235 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
NPIPB12-202ENST00000547235 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
NPIPB12-202ENST00000547235 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
NPIPB12-202ENST00000547235 FHAD1B1AJZ9 1412 aa16.8■□□□□ 0.28
NPIPB12-202ENST00000547235 FAM69CQ0P6D2 419 aa16.77■□□□□ 0.28
NPIPB12-202ENST00000547235 KIF13AQ9H1H9 1805 aa16.77■□□□□ 0.27
NPIPB12-202ENST00000547235 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms