RNA–Protein interactions for RNA: ENST00000547222.1

RPH3A-208, Transcript of rabphilin 3A, humanhuman

TSL 4

Gene RPH3A, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-208ENST00000547222 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
RPH3A-208ENST00000547222 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
RPH3A-208ENST00000547222 ABCC9O60706 1549 aa20.18■□□□□ 0.82
RPH3A-208ENST00000547222 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
RPH3A-208ENST00000547222 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
RPH3A-208ENST00000547222 NACADO15069 1562 aa19.52■□□□□ 0.71
RPH3A-208ENST00000547222 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
RPH3A-208ENST00000547222 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
RPH3A-208ENST00000547222 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
RPH3A-208ENST00000547222 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
RPH3A-208ENST00000547222 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
RPH3A-208ENST00000547222 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
RPH3A-208ENST00000547222 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
RPH3A-208ENST00000547222 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
RPH3A-208ENST00000547222 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
RPH3A-208ENST00000547222 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
RPH3A-208ENST00000547222 DNAJC5BQ9UF47 199 aa18.42■□□□□ 0.54
RPH3A-208ENST00000547222 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
RPH3A-208ENST00000547222 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
RPH3A-208ENST00000547222 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
RPH3A-208ENST00000547222 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
RPH3A-208ENST00000547222 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
RPH3A-208ENST00000547222 SMARCA2P51531 1590 aa18■□□□□ 0.47
RPH3A-208ENST00000547222 PEG3Q9GZU2 1588 aa17.97■□□□□ 0.47
RPH3A-208ENST00000547222 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
RPH3A-208ENST00000547222 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
RPH3A-208ENST00000547222 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
RPH3A-208ENST00000547222 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
RPH3A-208ENST00000547222 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
RPH3A-208ENST00000547222 WIZO95785 1651 aa17.76■□□□□ 0.43
RPH3A-208ENST00000547222 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
RPH3A-208ENST00000547222 TOP2AP11388 1531 aaKnown RBP17.61■□□□□ 0.41
RPH3A-208ENST00000547222 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
RPH3A-208ENST00000547222 NESP48681 1621 aa17.47■□□□□ 0.39
RPH3A-208ENST00000547222 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
RPH3A-208ENST00000547222 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
RPH3A-208ENST00000547222 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
RPH3A-208ENST00000547222 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
RPH3A-208ENST00000547222 CFTRP13569 1480 aa17.35■□□□□ 0.37
RPH3A-208ENST00000547222 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
RPH3A-208ENST00000547222 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
RPH3A-208ENST00000547222 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
RPH3A-208ENST00000547222 CUX2O14529 1486 aa17.29■□□□□ 0.36
RPH3A-208ENST00000547222 FANCD2Q9BXW9 1451 aa17.23■□□□□ 0.35
RPH3A-208ENST00000547222 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
RPH3A-208ENST00000547222 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
RPH3A-208ENST00000547222 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
RPH3A-208ENST00000547222 WDR62O43379 1518 aa17.16■□□□□ 0.34
RPH3A-208ENST00000547222 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
RPH3A-208ENST00000547222 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
RPH3A-208ENST00000547222 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
RPH3A-208ENST00000547222 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
RPH3A-208ENST00000547222 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
RPH3A-208ENST00000547222 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
RPH3A-208ENST00000547222 CUX1P39880 1505 aa16.83■□□□□ 0.28
RPH3A-208ENST00000547222 POLA1P09884 1462 aaPredicted RBP16.81■□□□□ 0.28
RPH3A-208ENST00000547222 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
RPH3A-208ENST00000547222 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
RPH3A-208ENST00000547222 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.27
RPH3A-208ENST00000547222 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
RPH3A-208ENST00000547222 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
RPH3A-208ENST00000547222 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
RPH3A-208ENST00000547222 WRNQ14191 1432 aaPredicted RBP eCLIP16.73■□□□□ 0.27
RPH3A-208ENST00000547222 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
RPH3A-208ENST00000547222 SOGA1O94964 1423 aa16.72■□□□□ 0.27
RPH3A-208ENST00000547222 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
RPH3A-208ENST00000547222 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
RPH3A-208ENST00000547222 DNAJC5Q9H3Z4 198 aa16.64■□□□□ 0.25
RPH3A-208ENST00000547222 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
RPH3A-208ENST00000547222 AQRO60306 1485 aaKnown RBP eCLIP16.62■□□□□ 0.25
RPH3A-208ENST00000547222 ABCA5Q8WWZ7 1642 aa16.6■□□□□ 0.25
RPH3A-208ENST00000547222 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
RPH3A-208ENST00000547222 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
RPH3A-208ENST00000547222 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
RPH3A-208ENST00000547222 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
RPH3A-208ENST00000547222 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
RPH3A-208ENST00000547222 CHD1O14646 1710 aa16.54■□□□□ 0.24
RPH3A-208ENST00000547222 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
RPH3A-208ENST00000547222 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
RPH3A-208ENST00000547222 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
RPH3A-208ENST00000547222 ERICH3Q5RHP9 1530 aa16.46■□□□□ 0.23
RPH3A-208ENST00000547222 SYNJ2O15056 1496 aa16.46■□□□□ 0.23
RPH3A-208ENST00000547222 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
RPH3A-208ENST00000547222 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
RPH3A-208ENST00000547222 FBLN2P98095 1184 aa16.38■□□□□ 0.21
RPH3A-208ENST00000547222 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
RPH3A-208ENST00000547222 FHAD1B1AJZ9 1412 aa16.37■□□□□ 0.21
RPH3A-208ENST00000547222 CUL7Q14999 1698 aa16.36■□□□□ 0.21
RPH3A-208ENST00000547222 GRIN2AQ12879 1464 aa16.35■□□□□ 0.21
RPH3A-208ENST00000547222 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
RPH3A-208ENST00000547222 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
RPH3A-208ENST00000547222 RIMBP3CA6NJZ7 1639 aa16.29■□□□□ 0.2
RPH3A-208ENST00000547222 RIMBP3BA6NNM3 1639 aa16.29■□□□□ 0.2
RPH3A-208ENST00000547222 RIMBP3Q9UFD9 1639 aa16.29■□□□□ 0.2
RPH3A-208ENST00000547222 NUP160Q12769 1436 aa16.28■□□□□ 0.2
RPH3A-208ENST00000547222 IGF1RP08069 1367 aa16.27■□□□□ 0.2
RPH3A-208ENST00000547222 ARHGEF11O15085 1522 aa16.27■□□□□ 0.2
RPH3A-208ENST00000547222 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
RPH3A-208ENST00000547222 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
RPH3A-208ENST00000547222 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms