RNA–Protein interactions for RNA: ENST00000546860.2

CR383656.9-201, humanhuman

BASIC

Gene CR383656.9, Length 1,178 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.9-201ENST00000546860 NISCHQ9Y2I1 1504 aa28.67■■■□□ 2.18
CR383656.9-201ENST00000546860 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
CR383656.9-201ENST00000546860 ABCC9O60706 1549 aa24.96■■□□□ 1.59
CR383656.9-201ENST00000546860 RB1CC1Q8TDY2 1594 aa24.01■■□□□ 1.43
CR383656.9-201ENST00000546860 NACADO15069 1562 aa23.95■■□□□ 1.43
CR383656.9-201ENST00000546860 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
CR383656.9-201ENST00000546860 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
CR383656.9-201ENST00000546860 DCAF8L2P0C7V8 631 aa23.73■■□□□ 1.39
CR383656.9-201ENST00000546860 UNC13AQ9UPW8 1703 aa23.71■■□□□ 1.39
CR383656.9-201ENST00000546860 DCAF1Q9Y4B6 1507 aa23.71■■□□□ 1.39
CR383656.9-201ENST00000546860 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
CR383656.9-201ENST00000546860 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
CR383656.9-201ENST00000546860 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
CR383656.9-201ENST00000546860 SHROOM4Q9ULL8 1493 aa23.01■■□□□ 1.27
CR383656.9-201ENST00000546860 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
CR383656.9-201ENST00000546860 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
CR383656.9-201ENST00000546860 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.22
CR383656.9-201ENST00000546860 CECR2Q9BXF3 1484 aa22.4■■□□□ 1.18
CR383656.9-201ENST00000546860 SMARCA4P51532 1647 aa22.33■■□□□ 1.17
CR383656.9-201ENST00000546860 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
CR383656.9-201ENST00000546860 MROH2BQ7Z745 1585 aa22.13■■□□□ 1.13
CR383656.9-201ENST00000546860 ATAD2BQ9ULI0 1458 aa22.11■■□□□ 1.13
CR383656.9-201ENST00000546860 SMARCA2P51531 1590 aa22.09■■□□□ 1.13
CR383656.9-201ENST00000546860 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.13
CR383656.9-201ENST00000546860 HMGXB3Q12766 1538 aa22.06■■□□□ 1.12
CR383656.9-201ENST00000546860 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
CR383656.9-201ENST00000546860 WIZO95785 1651 aa21.96■■□□□ 1.11
CR383656.9-201ENST00000546860 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
CR383656.9-201ENST00000546860 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
CR383656.9-201ENST00000546860 TOP2AP11388 1531 aaKnown RBP21.67■■□□□ 1.06
CR383656.9-201ENST00000546860 NESP48681 1621 aa21.65■■□□□ 1.06
CR383656.9-201ENST00000546860 LAMC3Q9Y6N6 1575 aa21.56■■□□□ 1.04
CR383656.9-201ENST00000546860 KIF21AQ7Z4S6 1674 aa21.51■■□□□ 1.03
CR383656.9-201ENST00000546860 ERCC6Q03468 1493 aa21.46■■□□□ 1.03
CR383656.9-201ENST00000546860 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
CR383656.9-201ENST00000546860 PRDM2Q13029 1718 aa21.4■■□□□ 1.02
CR383656.9-201ENST00000546860 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
CR383656.9-201ENST00000546860 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
CR383656.9-201ENST00000546860 CFTRP13569 1480 aa21.31■■□□□ 1
CR383656.9-201ENST00000546860 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
CR383656.9-201ENST00000546860 CUX2O14529 1486 aa21.26■□□□□ 0.99
CR383656.9-201ENST00000546860 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
CR383656.9-201ENST00000546860 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
CR383656.9-201ENST00000546860 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
CR383656.9-201ENST00000546860 WDR62O43379 1518 aa21.16■□□□□ 0.98
CR383656.9-201ENST00000546860 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
CR383656.9-201ENST00000546860 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
CR383656.9-201ENST00000546860 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
CR383656.9-201ENST00000546860 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
CR383656.9-201ENST00000546860 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
CR383656.9-201ENST00000546860 CUX1P39880 1505 aa20.78■□□□□ 0.92
CR383656.9-201ENST00000546860 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
CR383656.9-201ENST00000546860 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
CR383656.9-201ENST00000546860 POLA1P09884 1462 aaPredicted RBP20.73■□□□□ 0.91
CR383656.9-201ENST00000546860 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
CR383656.9-201ENST00000546860 EIF4G3O43432 1585 aaKnown RBP20.71■□□□□ 0.91
CR383656.9-201ENST00000546860 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.9
CR383656.9-201ENST00000546860 WDR97A6NE52 1622 aa20.68■□□□□ 0.9
CR383656.9-201ENST00000546860 FGD5Q6ZNL6 1462 aa20.68■□□□□ 0.9
CR383656.9-201ENST00000546860 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
CR383656.9-201ENST00000546860 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
CR383656.9-201ENST00000546860 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
CR383656.9-201ENST00000546860 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
CR383656.9-201ENST00000546860 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
CR383656.9-201ENST00000546860 SOGA1O94964 1423 aa20.53■□□□□ 0.88
CR383656.9-201ENST00000546860 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
CR383656.9-201ENST00000546860 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
CR383656.9-201ENST00000546860 DNAJC5Q9H3Z4 198 aa20.5■□□□□ 0.87
CR383656.9-201ENST00000546860 CHD1O14646 1710 aa20.5■□□□□ 0.87
CR383656.9-201ENST00000546860 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
CR383656.9-201ENST00000546860 ABCA10Q8WWZ4 1543 aa20.45■□□□□ 0.86
CR383656.9-201ENST00000546860 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
CR383656.9-201ENST00000546860 SNAPC4Q5SXM2 1469 aa20.38■□□□□ 0.85
CR383656.9-201ENST00000546860 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
CR383656.9-201ENST00000546860 GAPVD1Q14C86 1478 aa20.34■□□□□ 0.85
CR383656.9-201ENST00000546860 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
CR383656.9-201ENST00000546860 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
CR383656.9-201ENST00000546860 SYNJ2O15056 1496 aa20.23■□□□□ 0.83
CR383656.9-201ENST00000546860 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
CR383656.9-201ENST00000546860 ERICH3Q5RHP9 1530 aa20.21■□□□□ 0.83
CR383656.9-201ENST00000546860 CLASP1Q7Z460 1538 aa20.19■□□□□ 0.82
CR383656.9-201ENST00000546860 RIMBP3CA6NJZ7 1639 aa20.18■□□□□ 0.82
CR383656.9-201ENST00000546860 RIMBP3BA6NNM3 1639 aa20.18■□□□□ 0.82
CR383656.9-201ENST00000546860 RIMBP3Q9UFD9 1639 aa20.18■□□□□ 0.82
CR383656.9-201ENST00000546860 FBLN2P98095 1184 aa20.14■□□□□ 0.81
CR383656.9-201ENST00000546860 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
CR383656.9-201ENST00000546860 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
CR383656.9-201ENST00000546860 ARHGEF11O15085 1522 aa20.11■□□□□ 0.81
CR383656.9-201ENST00000546860 CUL7Q14999 1698 aa20.09■□□□□ 0.81
CR383656.9-201ENST00000546860 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
CR383656.9-201ENST00000546860 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
CR383656.9-201ENST00000546860 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
CR383656.9-201ENST00000546860 NUP160Q12769 1436 aa20.02■□□□□ 0.8
CR383656.9-201ENST00000546860 CHIC1Q5VXU3 224 aa20.01■□□□□ 0.79
CR383656.9-201ENST00000546860 RUSC2Q8N2Y8 1516 aa20.01■□□□□ 0.79
CR383656.9-201ENST00000546860 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
CR383656.9-201ENST00000546860 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
CR383656.9-201ENST00000546860 IGF1RP08069 1367 aa19.96■□□□□ 0.79
CR383656.9-201ENST00000546860 ERCC6L2Q5T890 1561 aa19.94■□□□□ 0.78
CR383656.9-201ENST00000546860 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms