RNA–Protein interactions for RNA: ENST00000546661.1

ATF7-203, Transcript of activating transcription factor 7, humanhuman

TSL 1 (best)

Gene ATF7, Length 1,125 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7-203ENST00000546661 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
ATF7-203ENST00000546661 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
ATF7-203ENST00000546661 ABCC9O60706 1549 aa23.76■■□□□ 1.39
ATF7-203ENST00000546661 RB1CC1Q8TDY2 1594 aa22.69■■□□□ 1.22
ATF7-203ENST00000546661 NACADO15069 1562 aa22.57■■□□□ 1.2
ATF7-203ENST00000546661 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
ATF7-203ENST00000546661 ZCCHC6Q5VYS8 1495 aaKnown RBP22.29■■□□□ 1.16
ATF7-203ENST00000546661 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
ATF7-203ENST00000546661 UNC13AQ9UPW8 1703 aa22.28■■□□□ 1.16
ATF7-203ENST00000546661 PABPN1Q86U42 306 aaKnown RBP eCLIP22.12■■□□□ 1.13
ATF7-203ENST00000546661 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
ATF7-203ENST00000546661 BICRAQ9NZM4 1560 aa22.05■■□□□ 1.12
ATF7-203ENST00000546661 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
ATF7-203ENST00000546661 SCRIBQ14160 1630 aa21.94■■□□□ 1.1
ATF7-203ENST00000546661 SHROOM4Q9ULL8 1493 aa21.7■■□□□ 1.06
ATF7-203ENST00000546661 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
ATF7-203ENST00000546661 CC2D2AQ9P2K1 1620 aa21.48■■□□□ 1.03
ATF7-203ENST00000546661 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
ATF7-203ENST00000546661 SMARCA4P51532 1647 aa20.91■□□□□ 0.94
ATF7-203ENST00000546661 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
ATF7-203ENST00000546661 NCAPD3P42695 1498 aa20.8■□□□□ 0.92
ATF7-203ENST00000546661 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
ATF7-203ENST00000546661 SMARCA2P51531 1590 aa20.77■□□□□ 0.92
ATF7-203ENST00000546661 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
ATF7-203ENST00000546661 MROH2BQ7Z745 1585 aa20.69■□□□□ 0.9
ATF7-203ENST00000546661 PEG3Q9GZU2 1588 aa20.65■□□□□ 0.9
ATF7-203ENST00000546661 BAZ1BQ9UIG0 1483 aaKnown RBP20.65■□□□□ 0.9
ATF7-203ENST00000546661 NESP48681 1621 aa20.49■□□□□ 0.87
ATF7-203ENST00000546661 WIZO95785 1651 aa20.49■□□□□ 0.87
ATF7-203ENST00000546661 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
ATF7-203ENST00000546661 LAMC3Q9Y6N6 1575 aa20.34■□□□□ 0.85
ATF7-203ENST00000546661 CUX2O14529 1486 aa20.32■□□□□ 0.84
ATF7-203ENST00000546661 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
ATF7-203ENST00000546661 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
ATF7-203ENST00000546661 THOC2Q8NI27 1593 aaKnown RBP20.26■□□□□ 0.83
ATF7-203ENST00000546661 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
ATF7-203ENST00000546661 CADPSQ9ULU8 1353 aa20.19■□□□□ 0.82
ATF7-203ENST00000546661 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
ATF7-203ENST00000546661 MRC2Q9UBG0 1479 aa20.04■□□□□ 0.8
ATF7-203ENST00000546661 CFTRP13569 1480 aa20.02■□□□□ 0.8
ATF7-203ENST00000546661 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
ATF7-203ENST00000546661 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
ATF7-203ENST00000546661 WDR62O43379 1518 aa19.99■□□□□ 0.79
ATF7-203ENST00000546661 PRDM2Q13029 1718 aa19.97■□□□□ 0.79
ATF7-203ENST00000546661 DNAJC5Q9H3Z4 198 aa19.96■□□□□ 0.79
ATF7-203ENST00000546661 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
ATF7-203ENST00000546661 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
ATF7-203ENST00000546661 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
ATF7-203ENST00000546661 DNMBPQ6XZF7 1577 aa19.63■□□□□ 0.73
ATF7-203ENST00000546661 SUPT5HO00267 1087 aaKnown RBP19.61■□□□□ 0.73
ATF7-203ENST00000546661 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
ATF7-203ENST00000546661 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
ATF7-203ENST00000546661 ABCC8Q09428 1581 aa19.56■□□□□ 0.72
ATF7-203ENST00000546661 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.71
ATF7-203ENST00000546661 TARBP1Q13395 1621 aaKnown RBP19.49■□□□□ 0.71
ATF7-203ENST00000546661 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
ATF7-203ENST00000546661 CUX1P39880 1505 aa19.44■□□□□ 0.7
ATF7-203ENST00000546661 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
ATF7-203ENST00000546661 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
ATF7-203ENST00000546661 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.7
ATF7-203ENST00000546661 OSCARQ8IYS5 282 aa19.37■□□□□ 0.69
ATF7-203ENST00000546661 CHD1O14646 1710 aa19.35■□□□□ 0.69
ATF7-203ENST00000546661 SOGA1O94964 1423 aa19.34■□□□□ 0.69
ATF7-203ENST00000546661 WDR97A6NE52 1622 aa19.31■□□□□ 0.68
ATF7-203ENST00000546661 TDRD9Q8NDG6 1382 aaKnown RBP19.31■□□□□ 0.68
ATF7-203ENST00000546661 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
ATF7-203ENST00000546661 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
ATF7-203ENST00000546661 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
ATF7-203ENST00000546661 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
ATF7-203ENST00000546661 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
ATF7-203ENST00000546661 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
ATF7-203ENST00000546661 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
ATF7-203ENST00000546661 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
ATF7-203ENST00000546661 FBLN2P98095 1184 aa19.21■□□□□ 0.67
ATF7-203ENST00000546661 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
ATF7-203ENST00000546661 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
ATF7-203ENST00000546661 ABCA5Q8WWZ7 1642 aa19.18■□□□□ 0.66
ATF7-203ENST00000546661 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
ATF7-203ENST00000546661 ARHGEF11O15085 1522 aa19.17■□□□□ 0.66
ATF7-203ENST00000546661 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
ATF7-203ENST00000546661 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
ATF7-203ENST00000546661 GAPVD1Q14C86 1478 aa19.15■□□□□ 0.66
ATF7-203ENST00000546661 MAGI1Q96QZ7 1491 aaPredicted RBP19.15■□□□□ 0.66
ATF7-203ENST00000546661 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
ATF7-203ENST00000546661 CLASP1Q7Z460 1538 aa19.07■□□□□ 0.64
ATF7-203ENST00000546661 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
ATF7-203ENST00000546661 ADAMTS12P58397 1594 aa19.02■□□□□ 0.64
ATF7-203ENST00000546661 ARAP1Q96P48 1450 aa19■□□□□ 0.63
ATF7-203ENST00000546661 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
ATF7-203ENST00000546661 GRIN2AQ12879 1464 aa18.96■□□□□ 0.63
ATF7-203ENST00000546661 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
ATF7-203ENST00000546661 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
ATF7-203ENST00000546661 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
ATF7-203ENST00000546661 FHAD1B1AJZ9 1412 aa18.9■□□□□ 0.62
ATF7-203ENST00000546661 NUP160Q12769 1436 aa18.85■□□□□ 0.61
ATF7-203ENST00000546661 ERCC6L2Q5T890 1561 aa18.83■□□□□ 0.6
ATF7-203ENST00000546661 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
ATF7-203ENST00000546661 KIF27Q86VH2 1401 aa18.76■□□□□ 0.59
ATF7-203ENST00000546661 RUSC2Q8N2Y8 1516 aa18.75■□□□□ 0.59
ATF7-203ENST00000546661 CUL7Q14999 1698 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms