RNA–Protein interactions for RNA: ENST00000546532.5

PXN-211, Transcript of paxillin, humanhuman

TSL 5

Gene PXN, Length 729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-211ENST00000546532 NISCHQ9Y2I1 1504 aa38.99■■■■□ 3.83
PXN-211ENST00000546532 ABCC9O60706 1549 aa35.19■■■■□ 3.22
PXN-211ENST00000546532 CCDC180Q9P1Z9 1646 aa34.95■■■■□ 3.18
PXN-211ENST00000546532 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
PXN-211ENST00000546532 DNAJC5BQ9UF47 199 aa33.18■■■□□ 2.9
PXN-211ENST00000546532 NACADO15069 1562 aa33.14■■■□□ 2.9
PXN-211ENST00000546532 DCAF8L2P0C7V8 631 aa33.04■■■□□ 2.88
PXN-211ENST00000546532 PABPN1Q86U42 306 aaKnown RBP eCLIP32.8■■■□□ 2.84
PXN-211ENST00000546532 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
PXN-211ENST00000546532 UNC13AQ9UPW8 1703 aa32.48■■■□□ 2.79
PXN-211ENST00000546532 BICRAQ9NZM4 1560 aa32.42■■■□□ 2.78
PXN-211ENST00000546532 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
PXN-211ENST00000546532 DCAF1Q9Y4B6 1507 aa32.2■■■□□ 2.74
PXN-211ENST00000546532 SHROOM4Q9ULL8 1493 aa32.01■■■□□ 2.71
PXN-211ENST00000546532 SCRIBQ14160 1630 aa31.89■■■□□ 2.7
PXN-211ENST00000546532 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
PXN-211ENST00000546532 CC2D2AQ9P2K1 1620 aa31.72■■■□□ 2.67
PXN-211ENST00000546532 EIF4G1Q04637 1599 aaKnown RBP31.64■■■□□ 2.66
PXN-211ENST00000546532 NCAPD3P42695 1498 aa30.65■■■□□ 2.5
PXN-211ENST00000546532 DNAJC5Q9H3Z4 198 aa30.56■■■□□ 2.48
PXN-211ENST00000546532 ATAD2BQ9ULI0 1458 aa30.53■■■□□ 2.48
PXN-211ENST00000546532 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
PXN-211ENST00000546532 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
PXN-211ENST00000546532 ERCC6Q03468 1493 aa30.4■■■□□ 2.46
PXN-211ENST00000546532 CUX2O14529 1486 aa30.38■■■□□ 2.45
PXN-211ENST00000546532 HMGXB3Q12766 1538 aa30.37■■■□□ 2.45
PXN-211ENST00000546532 BAZ1AQ9NRL2 1556 aaPredicted RBP30.26■■■□□ 2.43
PXN-211ENST00000546532 BAZ1BQ9UIG0 1483 aaKnown RBP30.22■■■□□ 2.43
PXN-211ENST00000546532 NESP48681 1621 aa30.18■■■□□ 2.42
PXN-211ENST00000546532 PEG3Q9GZU2 1588 aa30.12■■■□□ 2.41
PXN-211ENST00000546532 MROH2BQ7Z745 1585 aa30.05■■■□□ 2.4
PXN-211ENST00000546532 LAMC3Q9Y6N6 1575 aa29.91■■■□□ 2.38
PXN-211ENST00000546532 THOC2Q8NI27 1593 aaKnown RBP29.85■■■□□ 2.37
PXN-211ENST00000546532 PDS5BQ9NTI5 1447 aa29.81■■■□□ 2.36
PXN-211ENST00000546532 SUPT5HO00267 1087 aaKnown RBP29.74■■■□□ 2.35
PXN-211ENST00000546532 CADPSQ9ULU8 1353 aa29.73■■■□□ 2.35
PXN-211ENST00000546532 KIF21AQ7Z4S6 1674 aa29.67■■■□□ 2.34
PXN-211ENST00000546532 WIZO95785 1651 aa29.61■■■□□ 2.33
PXN-211ENST00000546532 RSF1Q96T23 1441 aaPredicted RBP29.56■■■□□ 2.32
PXN-211ENST00000546532 MRC2Q9UBG0 1479 aa29.55■■■□□ 2.32
PXN-211ENST00000546532 WDR62O43379 1518 aa29.45■■■□□ 2.3
PXN-211ENST00000546532 CEP164Q9UPV0 1460 aa29.4■■■□□ 2.3
PXN-211ENST00000546532 FANCD2Q9BXW9 1451 aa29.36■■■□□ 2.29
PXN-211ENST00000546532 CFTRP13569 1480 aa29.35■■■□□ 2.29
PXN-211ENST00000546532 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
PXN-211ENST00000546532 TRIM41Q8WV44 630 aa29.16■■■□□ 2.26
PXN-211ENST00000546532 URB2Q14146 1524 aaKnown RBP29.13■■■□□ 2.25
PXN-211ENST00000546532 OSCARQ8IYS5 282 aa29.02■■■□□ 2.24
PXN-211ENST00000546532 CCDC88BA6NC98 1476 aa28.98■■■□□ 2.23
PXN-211ENST00000546532 IFT140Q96RY7 1462 aa28.84■■■□□ 2.21
PXN-211ENST00000546532 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
PXN-211ENST00000546532 ZNF608Q9ULD9 1512 aaPredicted RBP28.79■■■□□ 2.2
PXN-211ENST00000546532 TOPBP1Q92547 1522 aa28.79■■■□□ 2.2
PXN-211ENST00000546532 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
PXN-211ENST00000546532 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
PXN-211ENST00000546532 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
PXN-211ENST00000546532 EIF4G3O43432 1585 aaKnown RBP28.56■■■□□ 2.16
PXN-211ENST00000546532 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
PXN-211ENST00000546532 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
PXN-211ENST00000546532 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
PXN-211ENST00000546532 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.162e-6■■■□□ 15.2
PXN-211ENST00000546532 TARBP1Q13395 1621 aaKnown RBP28.5■■■□□ 2.15
PXN-211ENST00000546532 ARHGEF11O15085 1522 aa28.49■■■□□ 2.15
PXN-211ENST00000546532 POLA1P09884 1462 aaPredicted RBP28.49■■■□□ 2.15
PXN-211ENST00000546532 FBLN2P98095 1184 aa28.4■■■□□ 2.14
PXN-211ENST00000546532 RAD54L2Q9Y4B4 1467 aa28.4■■■□□ 2.14
PXN-211ENST00000546532 SOGA1O94964 1423 aa28.38■■■□□ 2.13
PXN-211ENST00000546532 TDRD9Q8NDG6 1382 aaKnown RBP28.37■■■□□ 2.13
PXN-211ENST00000546532 CYB5RLQ6IPT4 315 aa28.35■■■□□ 2.13
PXN-211ENST00000546532 CHD1O14646 1710 aa28.3■■■□□ 2.12
PXN-211ENST00000546532 FGD5Q6ZNL6 1462 aa28.28■■■□□ 2.12
PXN-211ENST00000546532 CUX1P39880 1505 aa28.23■■■□□ 2.11
PXN-211ENST00000546532 SNAPC4Q5SXM2 1469 aa28.22■■■□□ 2.11
PXN-211ENST00000546532 ARAP1Q96P48 1450 aa28.22■■■□□ 2.11
PXN-211ENST00000546532 WDR97A6NE52 1622 aa28.18■■■□□ 2.1
PXN-211ENST00000546532 CHMP7Q8WUX9 453 aaPredicted RBP28.17■■■□□ 2.1
PXN-211ENST00000546532 GRIN2BQ13224 1484 aa28.14■■■□□ 2.09
PXN-211ENST00000546532 MAGI1Q96QZ7 1491 aaPredicted RBP28.14■■■□□ 2.09
PXN-211ENST00000546532 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.08
PXN-211ENST00000546532 TRHP20396 242 aaPredicted RBP28.07■■■□□ 2.08
PXN-211ENST00000546532 SYNJ2O15056 1496 aa28.06■■■□□ 2.08
PXN-211ENST00000546532 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
PXN-211ENST00000546532 GAPVD1Q14C86 1478 aa28.02■■■□□ 2.08
PXN-211ENST00000546532 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
PXN-211ENST00000546532 ABCA5Q8WWZ7 1642 aa27.88■■■□□ 2.05
PXN-211ENST00000546532 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
PXN-211ENST00000546532 WRNQ14191 1432 aaPredicted RBP eCLIP27.86■■■□□ 2.05
PXN-211ENST00000546532 GRIN2AQ12879 1464 aa27.76■■■□□ 2.04
PXN-211ENST00000546532 TOP2BQ02880 1626 aa27.72■■■□□ 2.03
PXN-211ENST00000546532 ADAMTS12P58397 1594 aa27.69■■■□□ 2.02
PXN-211ENST00000546532 NUP160Q12769 1436 aa27.69■■■□□ 2.02
PXN-211ENST00000546532 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
PXN-211ENST00000546532 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
PXN-211ENST00000546532 CEP170Q5SW79 1584 aa27.64■■■□□ 2.01
PXN-211ENST00000546532 ERCC6L2Q5T890 1561 aa27.64■■■□□ 2.01
PXN-211ENST00000546532 EEA1Q15075 1411 aa27.62■■■□□ 2.01
PXN-211ENST00000546532 ERICH3Q5RHP9 1530 aa27.59■■■□□ 2.01
PXN-211ENST00000546532 SHROOM2Q13796 1616 aa27.51■■□□□ 1.99
PXN-211ENST00000546532 PRG4Q92954 1404 aaPredicted RBP27.45■■□□□ 1.98
PXN-211ENST00000546532 LOC105371045A0A1W2PR82 267 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms