RNA–Protein interactions for RNA: ENST00000546519.1

SLC38A1-203, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-203ENST00000546519 NISCHQ9Y2I1 1504 aa53.32■■■■■ 6.13
SLC38A1-203ENST00000546519 ABCC9O60706 1549 aa48.6■■■■■ 5.37
SLC38A1-203ENST00000546519 CCDC180Q9P1Z9 1646 aa48.06■■■■■ 5.28
SLC38A1-203ENST00000546519 DNAJC5BQ9UF47 199 aa46.02■■■■■ 4.96
SLC38A1-203ENST00000546519 RB1CC1Q8TDY2 1594 aa45.96■■■■■ 4.95
SLC38A1-203ENST00000546519 NACADO15069 1562 aa45.5■■■■■ 4.87
SLC38A1-203ENST00000546519 DCAF8L2P0C7V8 631 aa45.26■■■■■ 4.84
SLC38A1-203ENST00000546519 PABPN1Q86U42 306 aaKnown RBP eCLIP45.17■■■■■ 4.82
SLC38A1-203ENST00000546519 UNC13AQ9UPW8 1703 aa45.07■■■■■ 4.81
SLC38A1-203ENST00000546519 BICRAQ9NZM4 1560 aa44.73■■■■■ 4.75
SLC38A1-203ENST00000546519 MYO15BQ96JP2 1530 aa44.64■■■■■ 4.74
SLC38A1-203ENST00000546519 ZCCHC6Q5VYS8 1495 aaKnown RBP44.1■■■■■ 4.65
SLC38A1-203ENST00000546519 DCAF1Q9Y4B6 1507 aa43.94■■■■■ 4.62
SLC38A1-203ENST00000546519 SHROOM4Q9ULL8 1493 aa43.87■■■■■ 4.61
SLC38A1-203ENST00000546519 SCRIBQ14160 1630 aa43.87■■■■■ 4.61
SLC38A1-203ENST00000546519 CC2D2AQ9P2K1 1620 aa43.86■■■■■ 4.61
SLC38A1-203ENST00000546519 CECR2Q9BXF3 1484 aa43.76■■■■■ 4.6
SLC38A1-203ENST00000546519 EIF4G1Q04637 1599 aaKnown RBP43.63■■■■■ 4.57
SLC38A1-203ENST00000546519 DNAJC5Q9H3Z4 198 aa42.48■■■■■ 4.39
SLC38A1-203ENST00000546519 NCAPD3P42695 1498 aa42■■■■■ 4.31
SLC38A1-203ENST00000546519 CUX2O14529 1486 aa41.95■■■■■ 4.31
SLC38A1-203ENST00000546519 ERCC6Q03468 1493 aa41.92■■■■■ 4.3
SLC38A1-203ENST00000546519 ATAD2BQ9ULI0 1458 aa41.85■■■■■ 4.29
SLC38A1-203ENST00000546519 SMARCA4P51532 1647 aa41.74■■■■■ 4.27
SLC38A1-203ENST00000546519 SMARCA2P51531 1590 aa41.67■■■■■ 4.26
SLC38A1-203ENST00000546519 HMGXB3Q12766 1538 aa41.67■■■■■ 4.26
SLC38A1-203ENST00000546519 NESP48681 1621 aa41.65■■■■■ 4.26
SLC38A1-203ENST00000546519 BAZ1BQ9UIG0 1483 aaKnown RBP41.43■■■■■ 4.22
SLC38A1-203ENST00000546519 BAZ1AQ9NRL2 1556 aaPredicted RBP41.4■■■■■ 4.22
SLC38A1-203ENST00000546519 THOC2Q8NI27 1593 aaKnown RBP41.29■■■■■ 4.2
SLC38A1-203ENST00000546519 PEG3Q9GZU2 1588 aa41.27■■■■■ 4.2
SLC38A1-203ENST00000546519 LAMC3Q9Y6N6 1575 aa41.16■■■■■ 4.18
SLC38A1-203ENST00000546519 MROH2BQ7Z745 1585 aa41.15■■■■■ 4.18
SLC38A1-203ENST00000546519 KIF21AQ7Z4S6 1674 aa41.11■■■■■ 4.17
SLC38A1-203ENST00000546519 PDS5BQ9NTI5 1447 aa40.89■■■■■ 4.14
SLC38A1-203ENST00000546519 CADPSQ9ULU8 1353 aa40.71■■■■■ 4.11
SLC38A1-203ENST00000546519 WIZO95785 1651 aa40.68■■■■■ 4.1
SLC38A1-203ENST00000546519 MRC2Q9UBG0 1479 aa40.63■■■■■ 4.09
SLC38A1-203ENST00000546519 WDR62O43379 1518 aa40.56■■■■■ 4.08
SLC38A1-203ENST00000546519 TRIM41Q8WV44 630 aa40.53■■■■■ 4.08
SLC38A1-203ENST00000546519 CEP164Q9UPV0 1460 aa40.38■■■■■ 4.05
SLC38A1-203ENST00000546519 RSF1Q96T23 1441 aaPredicted RBP40.37■■■■■ 4.05
SLC38A1-203ENST00000546519 FANCD2Q9BXW9 1451 aa40.3■■■■■ 4.04
SLC38A1-203ENST00000546519 CFTRP13569 1480 aa40.16■■■■■ 4.02
SLC38A1-203ENST00000546519 URB2Q14146 1524 aaKnown RBP40.05■■■■■ 4
SLC38A1-203ENST00000546519 TOP2AP11388 1531 aaKnown RBP40.04■■■■■ 4
SLC38A1-203ENST00000546519 OSCARQ8IYS5 282 aa39.95■■■■□ 3.99
SLC38A1-203ENST00000546519 SUPT5HO00267 1087 aaKnown RBP39.94■■■■□ 3.98
SLC38A1-203ENST00000546519 PRDM2Q13029 1718 aa39.81■■■■□ 3.96
SLC38A1-203ENST00000546519 ZNF608Q9ULD9 1512 aaPredicted RBP39.65■■■■□ 3.94
SLC38A1-203ENST00000546519 RIMBP3CA6NJZ7 1639 aa39.62■■■■□ 3.93
SLC38A1-203ENST00000546519 RIMBP3BA6NNM3 1639 aa39.62■■■■□ 3.93
SLC38A1-203ENST00000546519 RIMBP3Q9UFD9 1639 aa39.62■■■■□ 3.93
SLC38A1-203ENST00000546519 CCDC88BA6NC98 1476 aa39.61■■■■□ 3.93
SLC38A1-203ENST00000546519 IFT140Q96RY7 1462 aa39.56■■■■□ 3.92
SLC38A1-203ENST00000546519 TOPBP1Q92547 1522 aa39.5■■■■□ 3.91
SLC38A1-203ENST00000546519 EIF4G3O43432 1585 aaKnown RBP39.41■■■■□ 3.9
SLC38A1-203ENST00000546519 ARHGEF11O15085 1522 aa39.4■■■■□ 3.9
SLC38A1-203ENST00000546519 DNMBPQ6XZF7 1577 aa39.3■■■■□ 3.88
SLC38A1-203ENST00000546519 ABCC8Q09428 1581 aa39.26■■■■□ 3.88
SLC38A1-203ENST00000546519 CHD1O14646 1710 aa39.24■■■■□ 3.87
SLC38A1-203ENST00000546519 TARBP1Q13395 1621 aaKnown RBP39.22■■■■□ 3.87
SLC38A1-203ENST00000546519 AQRO60306 1485 aaKnown RBP eCLIP39.2■■■■□ 3.87
SLC38A1-203ENST00000546519 CYB5RLQ6IPT4 315 aa39.13■■■■□ 3.85
SLC38A1-203ENST00000546519 POLA1P09884 1462 aaPredicted RBP39.07■■■■□ 3.85
SLC38A1-203ENST00000546519 FBLN2P98095 1184 aa39.03■■■■□ 3.84
SLC38A1-203ENST00000546519 ARAP1Q96P48 1450 aa39■■■■□ 3.83
SLC38A1-203ENST00000546519 RAD54L2Q9Y4B4 1467 aa38.98■■■■□ 3.83
SLC38A1-203ENST00000546519 TDRD9Q8NDG6 1382 aaKnown RBP38.88■■■■□ 3.81
SLC38A1-203ENST00000546519 TRHP20396 242 aaPredicted RBP38.85■■■■□ 3.81
SLC38A1-203ENST00000546519 SOGA1O94964 1423 aa38.85■■■■□ 3.81
SLC38A1-203ENST00000546519 SNAPC4Q5SXM2 1469 aa38.79■■■■□ 3.8
SLC38A1-203ENST00000546519 FGD5Q6ZNL6 1462 aa38.78■■■■□ 3.8
SLC38A1-203ENST00000546519 CLASP1Q7Z460 1538 aa38.7■■■■□ 3.79
SLC38A1-203ENST00000546519 CUX1P39880 1505 aa38.68■■■■□ 3.78
SLC38A1-203ENST00000546519 WDR97A6NE52 1622 aa38.66■■■■□ 3.78
SLC38A1-203ENST00000546519 CHMP7Q8WUX9 453 aaPredicted RBP38.6■■■■□ 3.77
SLC38A1-203ENST00000546519 SYNJ1O43426 1573 aa38.6■■■■□ 3.77
SLC38A1-203ENST00000546519 MAGI1Q96QZ7 1491 aaPredicted RBP38.58■■■■□ 3.77
SLC38A1-203ENST00000546519 GRIN2BQ13224 1484 aa38.55■■■■□ 3.76
SLC38A1-203ENST00000546519 PBRM1Q86U86 1689 aa38.49■■■■□ 3.75
SLC38A1-203ENST00000546519 SYNJ2O15056 1496 aa38.48■■■■□ 3.75
SLC38A1-203ENST00000546519 GAPVD1Q14C86 1478 aa38.37■■■■□ 3.73
SLC38A1-203ENST00000546519 ABCA5Q8WWZ7 1642 aa38.3■■■■□ 3.72
SLC38A1-203ENST00000546519 ABCA10Q8WWZ4 1543 aa38.25■■■■□ 3.71
SLC38A1-203ENST00000546519 ERCC6L2Q5T890 1561 aa38.16■■■■□ 3.7
SLC38A1-203ENST00000546519 GRIN2AQ12879 1464 aa38.09■■■■□ 3.69
SLC38A1-203ENST00000546519 WRNQ14191 1432 aaPredicted RBP eCLIP38.05■■■■□ 3.68
SLC38A1-203ENST00000546519 ADAMTS12P58397 1594 aa38.04■■■■□ 3.68
SLC38A1-203ENST00000546519 CEP170Q5SW79 1584 aa38.04■■■■□ 3.68
SLC38A1-203ENST00000546519 AEBP2Q6ZN18 517 aaPredicted RBP38.01■■■■□ 3.68
SLC38A1-203ENST00000546519 NUP160Q12769 1436 aa37.95■■■■□ 3.67
SLC38A1-203ENST00000546519 BIVM-ERCC5R4GMW8 1640 aa37.94■■■■□ 3.66
SLC38A1-203ENST00000546519 TOP2BQ02880 1626 aa37.9■■■■□ 3.66
SLC38A1-203ENST00000546519 CHIC1Q5VXU3 224 aa37.9■■■■□ 3.66
SLC38A1-203ENST00000546519 SHROOM2Q13796 1616 aa37.88■■■■□ 3.65
SLC38A1-203ENST00000546519 FHAD1B1AJZ9 1412 aa37.84■■■■□ 3.65
SLC38A1-203ENST00000546519 ERICH3Q5RHP9 1530 aa37.75■■■■□ 3.63
SLC38A1-203ENST00000546519 KIF13AQ9H1H9 1805 aa37.7■■■■□ 3.63
SLC38A1-203ENST00000546519 PRG4Q92954 1404 aaPredicted RBP37.65■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms