RNA–Protein interactions for RNA: ENST00000546442.5

FGD4-213, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 5 BASIC

Gene FGD4, Length 3,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-213ENST00000546442 NISCHQ9Y2I1 1504 aa11.39□□□□□ -0.59
FGD4-213ENST00000546442 CCDC180Q9P1Z9 1646 aa10.41□□□□□ -0.74
FGD4-213ENST00000546442 MYO15BQ96JP2 1530 aa9.79□□□□□ -0.84
FGD4-213ENST00000546442 DCAF1Q9Y4B6 1507 aa9.7□□□□□ -0.86
FGD4-213ENST00000546442 NACADO15069 1562 aa9.6□□□□□ -0.87
FGD4-213ENST00000546442 UNC13AQ9UPW8 1703 aa9.58□□□□□ -0.88
FGD4-213ENST00000546442 ZCCHC6Q5VYS8 1495 aaKnown RBP9.58□□□□□ -0.88
FGD4-213ENST00000546442 ABCC9O60706 1549 aa9.55□□□□□ -0.88
FGD4-213ENST00000546442 RB1CC1Q8TDY2 1594 aa9.52□□□□□ -0.89
FGD4-213ENST00000546442 SHROOM4Q9ULL8 1493 aa9.44□□□□□ -0.9
FGD4-213ENST00000546442 BICRAQ9NZM4 1560 aa9.43□□□□□ -0.9
FGD4-213ENST00000546442 AEBP2Q6ZN18 517 aaPredicted RBP9.17□□□□□ -0.94
FGD4-213ENST00000546442 SCRIBQ14160 1630 aa9.06□□□□□ -0.96
FGD4-213ENST00000546442 PEG3Q9GZU2 1588 aa9.04□□□□□ -0.96
FGD4-213ENST00000546442 EIF4G1Q04637 1599 aaKnown RBP9□□□□□ -0.97
FGD4-213ENST00000546442 CHIC1Q5VXU3 224 aa8.97□□□□□ -0.97
FGD4-213ENST00000546442 CC2D2AQ9P2K1 1620 aa8.94□□□□□ -0.98
FGD4-213ENST00000546442 SMARCA4P51532 1647 aa8.89□□□□□ -0.99
FGD4-213ENST00000546442 HMGXB3Q12766 1538 aa8.88□□□□□ -0.99
FGD4-213ENST00000546442 SMARCA2P51531 1590 aa8.84□□□□□ -0.99
FGD4-213ENST00000546442 DNAJC5BQ9UF47 199 aa8.82□□□□□ -1
FGD4-213ENST00000546442 NCAPD3P42695 1498 aa8.81□□□□□ -1
FGD4-213ENST00000546442 BAZ1AQ9NRL2 1556 aaPredicted RBP8.8□□□□□ -1
FGD4-213ENST00000546442 ATAD2BQ9ULI0 1458 aa8.74□□□□□ -1.01
FGD4-213ENST00000546442 CECR2Q9BXF3 1484 aa8.73□□□□□ -1.01
FGD4-213ENST00000546442 PRDM2Q13029 1718 aa8.72□□□□□ -1.01
FGD4-213ENST00000546442 MROH2BQ7Z745 1585 aa8.71□□□□□ -1.02
FGD4-213ENST00000546442 PABPN1Q86U42 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
FGD4-213ENST00000546442 DCAF8L2P0C7V8 631 aa8.69□□□□□ -1.02
FGD4-213ENST00000546442 WIZO95785 1651 aa8.63□□□□□ -1.03
FGD4-213ENST00000546442 TOP2AP11388 1531 aaKnown RBP8.62□□□□□ -1.03
FGD4-213ENST00000546442 THOC2Q8NI27 1593 aaKnown RBP8.62□□□□□ -1.03
FGD4-213ENST00000546442 LAMC3Q9Y6N6 1575 aa8.61□□□□□ -1.03
FGD4-213ENST00000546442 RSF1Q96T23 1441 aaPredicted RBP8.56□□□□□ -1.04
FGD4-213ENST00000546442 KIF21AQ7Z4S6 1674 aa8.52□□□□□ -1.04
FGD4-213ENST00000546442 BAZ1BQ9UIG0 1483 aaKnown RBP8.52□□□□□ -1.05
FGD4-213ENST00000546442 WDR62O43379 1518 aa8.49□□□□□ -1.05
FGD4-213ENST00000546442 CFTRP13569 1480 aa8.48□□□□□ -1.05
FGD4-213ENST00000546442 CUX2O14529 1486 aa8.47□□□□□ -1.05
FGD4-213ENST00000546442 WDR97A6NE52 1622 aa8.41□□□□□ -1.06
FGD4-213ENST00000546442 NESP48681 1621 aa8.38□□□□□ -1.07
FGD4-213ENST00000546442 CCDC88BA6NC98 1476 aa8.37□□□□□ -1.07
FGD4-213ENST00000546442 CADPSQ9ULU8 1353 aa8.36□□□□□ -1.07
FGD4-213ENST00000546442 TARBP1Q13395 1621 aaKnown RBP8.34□□□□□ -1.08
FGD4-213ENST00000546442 MRC2Q9UBG0 1479 aa8.32□□□□□ -1.08
FGD4-213ENST00000546442 BIVM-ERCC5R4GMW8 1640 aa8.32□□□□□ -1.08
FGD4-213ENST00000546442 URB2Q14146 1524 aaKnown RBP8.31□□□□□ -1.08
FGD4-213ENST00000546442 DNMBPQ6XZF7 1577 aa8.3□□□□□ -1.08
FGD4-213ENST00000546442 PDS5BQ9NTI5 1447 aa8.28□□□□□ -1.08
FGD4-213ENST00000546442 FANCD2Q9BXW9 1451 aa8.27□□□□□ -1.09
FGD4-213ENST00000546442 CEP164Q9UPV0 1460 aa8.25□□□□□ -1.09
FGD4-213ENST00000546442 ABCA5Q8WWZ7 1642 aa8.23□□□□□ -1.09
FGD4-213ENST00000546442 ABCC8Q09428 1581 aa8.23□□□□□ -1.09
FGD4-213ENST00000546442 TOPBP1Q92547 1522 aa8.22□□□□□ -1.09
FGD4-213ENST00000546442 TOP2BQ02880 1626 aa8.21□□□□□ -1.1
FGD4-213ENST00000546442 CUX1P39880 1505 aa8.2□□□□□ -1.1
FGD4-213ENST00000546442 EIF4G3O43432 1585 aaKnown RBP8.18□□□□□ -1.1
FGD4-213ENST00000546442 PBRM1Q86U86 1689 aa8.17□□□□□ -1.1
FGD4-213ENST00000546442 IFT140Q96RY7 1462 aa8.16□□□□□ -1.1
FGD4-213ENST00000546442 ERCC6Q03468 1493 aa8.14□□□□□ -1.11
FGD4-213ENST00000546442 SYNJ1O43426 1573 aa8.13□□□□□ -1.11
FGD4-213ENST00000546442 POLA1P09884 1462 aaPredicted RBP8.13□□□□□ -1.11
FGD4-213ENST00000546442 ABCA10Q8WWZ4 1543 aa8.13□□□□□ -1.11
FGD4-213ENST00000546442 CLASP1Q7Z460 1538 aa8.12□□□□□ -1.11
FGD4-213ENST00000546442 SHROOM2Q13796 1616 aa8.11□□□□□ -1.11
FGD4-213ENST00000546442 CHD1O14646 1710 aa8.1□□□□□ -1.11
FGD4-213ENST00000546442 ADAMTS12P58397 1594 aa8.07□□□□□ -1.12
FGD4-213ENST00000546442 FGD5Q6ZNL6 1462 aa8.05□□□□□ -1.12
FGD4-213ENST00000546442 ERICH3Q5RHP9 1530 aa8.05□□□□□ -1.12
FGD4-213ENST00000546442 ZNF608Q9ULD9 1512 aaPredicted RBP8.05□□□□□ -1.12
FGD4-213ENST00000546442 SENP3Q9H4L4 574 aaPredicted RBP8.05□□□□□ -1.12
FGD4-213ENST00000546442 MAGI1Q96QZ7 1491 aaPredicted RBP8.03□□□□□ -1.12
FGD4-213ENST00000546442 CUL7Q14999 1698 aa8□□□□□ -1.13
FGD4-213ENST00000546442 RUSC2Q8N2Y8 1516 aa7.98□□□□□ -1.13
FGD4-213ENST00000546442 NUP160Q12769 1436 aa7.97□□□□□ -1.13
FGD4-213ENST00000546442 CEP170Q5SW79 1584 aa7.96□□□□□ -1.13
FGD4-213ENST00000546442 RIMBP3CA6NJZ7 1639 aa7.95□□□□□ -1.14
FGD4-213ENST00000546442 RIMBP3BA6NNM3 1639 aa7.95□□□□□ -1.14
FGD4-213ENST00000546442 RIMBP3Q9UFD9 1639 aa7.95□□□□□ -1.14
FGD4-213ENST00000546442 RAD54L2Q9Y4B4 1467 aa7.95□□□□□ -1.14
FGD4-213ENST00000546442 GRIN2BQ13224 1484 aa7.95□□□□□ -1.14
FGD4-213ENST00000546442 SYNJ2O15056 1496 aa7.94□□□□□ -1.14
FGD4-213ENST00000546442 WRNQ14191 1432 aaPredicted RBP eCLIP7.94□□□□□ -1.14
FGD4-213ENST00000546442 DNAJC5Q9H3Z4 198 aa7.93□□□□□ -1.14
FGD4-213ENST00000546442 SOGA1O94964 1423 aa7.91□□□□□ -1.14
FGD4-213ENST00000546442 SNAPC4Q5SXM2 1469 aa7.91□□□□□ -1.14
FGD4-213ENST00000546442 GAPVD1Q14C86 1478 aa7.9□□□□□ -1.14
FGD4-213ENST00000546442 GRIN2AQ12879 1464 aa7.89□□□□□ -1.15
FGD4-213ENST00000546442 CTTNBP2Q8WZ74 1663 aa7.88□□□□□ -1.15
FGD4-213ENST00000546442 AQRO60306 1485 aaKnown RBP eCLIP7.88□□□□□ -1.15
FGD4-213ENST00000546442 ARHGEF11O15085 1522 aa7.87□□□□□ -1.15
FGD4-213ENST00000546442 FHAD1B1AJZ9 1412 aa7.86□□□□□ -1.15
FGD4-213ENST00000546442 ARAP1Q96P48 1450 aa7.83□□□□□ -1.16
FGD4-213ENST00000546442 SAMD9Q5K651 1589 aa7.83□□□□□ -1.16
FGD4-213ENST00000546442 PRXQ9BXM0 1461 aa7.83□□□□□ -1.16
FGD4-213ENST00000546442 UGGT2Q9NYU1 1516 aa7.82□□□□□ -1.16
FGD4-213ENST00000546442 KIF21BO75037 1637 aa7.82□□□□□ -1.16
FGD4-213ENST00000546442 ERCC6L2Q5T890 1561 aa7.81□□□□□ -1.16
FGD4-213ENST00000546442 IGF1RP08069 1367 aa7.79□□□□□ -1.16
FGD4-213ENST00000546442 KIF13AQ9H1H9 1805 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms