RNA–Protein interactions for RNA: ENST00000546302.6

HMBS-225, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 5

Gene HMBS, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-225ENST00000546302 NISCHQ9Y2I1 1504 aa39.11■■■■□ 3.85
HMBS-225ENST00000546302 CCDC180Q9P1Z9 1646 aa34.89■■■■□ 3.18
HMBS-225ENST00000546302 ABCC9O60706 1549 aa33.84■■■■□ 3.01
HMBS-225ENST00000546302 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
HMBS-225ENST00000546302 NACADO15069 1562 aa32.7■■■□□ 2.82
HMBS-225ENST00000546302 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
HMBS-225ENST00000546302 MYO15BQ96JP2 1530 aa32.57■■■□□ 2.8
HMBS-225ENST00000546302 DCAF1Q9Y4B6 1507 aa32.44■■■□□ 2.78
HMBS-225ENST00000546302 DCAF8L2P0C7V8 631 aa32.36■■■□□ 2.77
HMBS-225ENST00000546302 UNC13AQ9UPW8 1703 aa32.17■■■□□ 2.74
HMBS-225ENST00000546302 BICRAQ9NZM4 1560 aa31.77■■■□□ 2.68
HMBS-225ENST00000546302 SCRIBQ14160 1630 aa31.67■■■□□ 2.66
HMBS-225ENST00000546302 PABPN1Q86U42 306 aaKnown RBP eCLIP31.55■■■□□ 2.64
HMBS-225ENST00000546302 SHROOM4Q9ULL8 1493 aa31.44■■■□□ 2.62
HMBS-225ENST00000546302 DNAJC5BQ9UF47 199 aa31.01■■■□□ 2.55
HMBS-225ENST00000546302 EIF4G1Q04637 1599 aaKnown RBP30.88■■■□□ 2.53
HMBS-225ENST00000546302 CC2D2AQ9P2K1 1620 aa30.74■■■□□ 2.51
HMBS-225ENST00000546302 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
HMBS-225ENST00000546302 SMARCA4P51532 1647 aa30.38■■■□□ 2.45
HMBS-225ENST00000546302 BAZ1AQ9NRL2 1556 aaPredicted RBP30.32■■■□□ 2.44
HMBS-225ENST00000546302 SMARCA2P51531 1590 aa30.14■■■□□ 2.42
HMBS-225ENST00000546302 PEG3Q9GZU2 1588 aa30.14■■■□□ 2.42
HMBS-225ENST00000546302 NCAPD3P42695 1498 aa30.13■■■□□ 2.41
HMBS-225ENST00000546302 ATAD2BQ9ULI0 1458 aa30.13■■■□□ 2.41
HMBS-225ENST00000546302 MROH2BQ7Z745 1585 aa30.12■■■□□ 2.41
HMBS-225ENST00000546302 HMGXB3Q12766 1538 aa30.04■■■□□ 2.4
HMBS-225ENST00000546302 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
HMBS-225ENST00000546302 WIZO95785 1651 aa29.85■■■□□ 2.37
HMBS-225ENST00000546302 RSF1Q96T23 1441 aaPredicted RBP29.77■■■□□ 2.36
HMBS-225ENST00000546302 TOP2AP11388 1531 aaKnown RBP29.51■■■□□ 2.32
HMBS-225ENST00000546302 LAMC3Q9Y6N6 1575 aa29.38■■■□□ 2.29
HMBS-225ENST00000546302 NESP48681 1621 aa29.34■■■□□ 2.29
HMBS-225ENST00000546302 CADPSQ9ULU8 1353 aa29.2■■■□□ 2.26
HMBS-225ENST00000546302 KIF21AQ7Z4S6 1674 aa29.15■■■□□ 2.26
HMBS-225ENST00000546302 ERCC6Q03468 1493 aa29.14■■■□□ 2.26
HMBS-225ENST00000546302 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
HMBS-225ENST00000546302 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
HMBS-225ENST00000546302 CFTRP13569 1480 aa29.09■■■□□ 2.25
HMBS-225ENST00000546302 PDS5BQ9NTI5 1447 aa29.06■■■□□ 2.24
HMBS-225ENST00000546302 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.24
HMBS-225ENST00000546302 CUX2O14529 1486 aa28.93■■■□□ 2.22
HMBS-225ENST00000546302 FANCD2Q9BXW9 1451 aa28.87■■■□□ 2.21
HMBS-225ENST00000546302 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
HMBS-225ENST00000546302 CEP164Q9UPV0 1460 aa28.84■■■□□ 2.21
HMBS-225ENST00000546302 MRC2Q9UBG0 1479 aa28.79■■■□□ 2.2
HMBS-225ENST00000546302 WDR62O43379 1518 aa28.77■■■□□ 2.2
HMBS-225ENST00000546302 URB2Q14146 1524 aaKnown RBP28.61■■■□□ 2.17
HMBS-225ENST00000546302 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
HMBS-225ENST00000546302 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.15
HMBS-225ENST00000546302 TOPBP1Q92547 1522 aa28.45■■■□□ 2.15
HMBS-225ENST00000546302 CUX1P39880 1505 aa28.27■■■□□ 2.12
HMBS-225ENST00000546302 IFT140Q96RY7 1462 aa28.23■■■□□ 2.11
HMBS-225ENST00000546302 TARBP1Q13395 1621 aaKnown RBP28.22■■■□□ 2.11
HMBS-225ENST00000546302 POLA1P09884 1462 aaPredicted RBP28.21■■■□□ 2.11
HMBS-225ENST00000546302 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
HMBS-225ENST00000546302 FGD5Q6ZNL6 1462 aa28.13■■■□□ 2.09
HMBS-225ENST00000546302 ZNF608Q9ULD9 1512 aaPredicted RBP28.09■■■□□ 2.09
HMBS-225ENST00000546302 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
HMBS-225ENST00000546302 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
HMBS-225ENST00000546302 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
HMBS-225ENST00000546302 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
HMBS-225ENST00000546302 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.08
HMBS-225ENST00000546302 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
HMBS-225ENST00000546302 SOGA1O94964 1423 aa28.02■■■□□ 2.08
HMBS-225ENST00000546302 AQRO60306 1485 aaKnown RBP eCLIP27.9■■■□□ 2.062e-8■■■■■ 29.1
HMBS-225ENST00000546302 DNAJC5Q9H3Z4 198 aa27.9■■■□□ 2.06
HMBS-225ENST00000546302 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
HMBS-225ENST00000546302 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
HMBS-225ENST00000546302 PBRM1Q86U86 1689 aa27.83■■■□□ 2.05
HMBS-225ENST00000546302 TDRD9Q8NDG6 1382 aaKnown RBP27.83■■■□□ 2.05
HMBS-225ENST00000546302 CHD1O14646 1710 aa27.77■■■□□ 2.04
HMBS-225ENST00000546302 GAPVD1Q14C86 1478 aa27.75■■■□□ 2.03
HMBS-225ENST00000546302 GRIN2BQ13224 1484 aa27.73■■■□□ 2.03
HMBS-225ENST00000546302 MAGI1Q96QZ7 1491 aaPredicted RBP27.69■■■□□ 2.02
HMBS-225ENST00000546302 SNAPC4Q5SXM2 1469 aa27.68■■■□□ 2.02
HMBS-225ENST00000546302 OSCARQ8IYS5 282 aa27.62■■■□□ 2.01
HMBS-225ENST00000546302 ERICH3Q5RHP9 1530 aa27.58■■■□□ 2.01
HMBS-225ENST00000546302 SYNJ2O15056 1496 aa27.56■■■□□ 2
HMBS-225ENST00000546302 ADAMTS12P58397 1594 aa27.54■■■□□ 2
HMBS-225ENST00000546302 KIF27Q86VH2 1401 aa27.44■■□□□ 1.98
HMBS-225ENST00000546302 FBLN2P98095 1184 aa27.42■■□□□ 1.98
HMBS-225ENST00000546302 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
HMBS-225ENST00000546302 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
HMBS-225ENST00000546302 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
HMBS-225ENST00000546302 GRIN2AQ12879 1464 aa27.39■■□□□ 1.98
HMBS-225ENST00000546302 CUL7Q14999 1698 aa27.38■■□□□ 1.97
HMBS-225ENST00000546302 IGF1RP08069 1367 aa27.33■■□□□ 1.97
HMBS-225ENST00000546302 RIMBP3CA6NJZ7 1639 aa27.32■■□□□ 1.96
HMBS-225ENST00000546302 RIMBP3BA6NNM3 1639 aa27.32■■□□□ 1.96
HMBS-225ENST00000546302 RIMBP3Q9UFD9 1639 aa27.32■■□□□ 1.96
HMBS-225ENST00000546302 NUP160Q12769 1436 aa27.3■■□□□ 1.96
HMBS-225ENST00000546302 CEP170Q5SW79 1584 aa27.3■■□□□ 1.96
HMBS-225ENST00000546302 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
HMBS-225ENST00000546302 ARHGEF11O15085 1522 aa27.27■■□□□ 1.96
HMBS-225ENST00000546302 RUSC2Q8N2Y8 1516 aa27.22■■□□□ 1.95
HMBS-225ENST00000546302 SHROOM2Q13796 1616 aa27.18■■□□□ 1.94
HMBS-225ENST00000546302 CARMIL1Q5VZK9 1371 aa27.14■■□□□ 1.94
HMBS-225ENST00000546302 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
HMBS-225ENST00000546302 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
HMBS-225ENST00000546302 KIAA0586Q9BVV6 1533 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms