RNA–Protein interactions for RNA: ENST00000546223.1

FAM138D-202, Transcript of family with sequence similarity 138 member D, humanhuman

TSL 2

Gene FAM138D, Length 1,199 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM138D-202ENST00000546223 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
FAM138D-202ENST00000546223 NISCHQ9Y2I1 1504 aa25.16■■□□□ 1.62
FAM138D-202ENST00000546223 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
FAM138D-202ENST00000546223 ABCC9O60706 1549 aa22.77■■□□□ 1.24
FAM138D-202ENST00000546223 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
FAM138D-202ENST00000546223 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
FAM138D-202ENST00000546223 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
FAM138D-202ENST00000546223 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
FAM138D-202ENST00000546223 NACADO15069 1562 aa21.48■■□□□ 1.03
FAM138D-202ENST00000546223 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.02
FAM138D-202ENST00000546223 UNC13AQ9UPW8 1703 aa21.25■□□□□ 0.99
FAM138D-202ENST00000546223 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
FAM138D-202ENST00000546223 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
FAM138D-202ENST00000546223 DCAF8L2P0C7V8 631 aa21.15■□□□□ 0.98
FAM138D-202ENST00000546223 BICRAQ9NZM4 1560 aa21.09■□□□□ 0.97
FAM138D-202ENST00000546223 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
FAM138D-202ENST00000546223 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
FAM138D-202ENST00000546223 SHROOM4Q9ULL8 1493 aa20.76■□□□□ 0.91
FAM138D-202ENST00000546223 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
FAM138D-202ENST00000546223 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
FAM138D-202ENST00000546223 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
FAM138D-202ENST00000546223 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
FAM138D-202ENST00000546223 PLPPR3Q6T4P5 718 aa20.06■□□□□ 0.8
FAM138D-202ENST00000546223 DNAJC5Q9H3Z4 198 aa19.97■□□□□ 0.79
FAM138D-202ENST00000546223 FOXD1Q16676 465 aa19.9■□□□□ 0.78
FAM138D-202ENST00000546223 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
FAM138D-202ENST00000546223 CUX2O14529 1486 aa19.76■□□□□ 0.75
FAM138D-202ENST00000546223 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
FAM138D-202ENST00000546223 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
FAM138D-202ENST00000546223 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
FAM138D-202ENST00000546223 SMARCA2P51531 1590 aa19.65■□□□□ 0.74
FAM138D-202ENST00000546223 ERCC6Q03468 1493 aa19.64■□□□□ 0.73
FAM138D-202ENST00000546223 NESP48681 1621 aa19.55■□□□□ 0.72
FAM138D-202ENST00000546223 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
FAM138D-202ENST00000546223 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
FAM138D-202ENST00000546223 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
FAM138D-202ENST00000546223 THOC2Q8NI27 1593 aaKnown RBP19.43■□□□□ 0.7
FAM138D-202ENST00000546223 LAMC3Q9Y6N6 1575 aa19.41■□□□□ 0.7
FAM138D-202ENST00000546223 MROH2BQ7Z745 1585 aa19.38■□□□□ 0.69
FAM138D-202ENST00000546223 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
FAM138D-202ENST00000546223 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
FAM138D-202ENST00000546223 CADPSQ9ULU8 1353 aa19.19■□□□□ 0.66
FAM138D-202ENST00000546223 PPP6R1Q9UPN7 881 aa19.16■□□□□ 0.66
FAM138D-202ENST00000546223 WIZO95785 1651 aa19.14■□□□□ 0.66
FAM138D-202ENST00000546223 ADRA2BP18089 450 aa19.14■□□□□ 0.65
FAM138D-202ENST00000546223 WDR62O43379 1518 aa19.11■□□□□ 0.65
FAM138D-202ENST00000546223 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
FAM138D-202ENST00000546223 CEP164Q9UPV0 1460 aa18.98■□□□□ 0.63
FAM138D-202ENST00000546223 CFTRP13569 1480 aa18.96■□□□□ 0.63
FAM138D-202ENST00000546223 FANCD2Q9BXW9 1451 aa18.96■□□□□ 0.63
FAM138D-202ENST00000546223 RSF1Q96T23 1441 aaPredicted RBP18.9■□□□□ 0.62
FAM138D-202ENST00000546223 TRIM41Q8WV44 630 aa18.89■□□□□ 0.61
FAM138D-202ENST00000546223 TOP2AP11388 1531 aaKnown RBP18.87■□□□□ 0.61
FAM138D-202ENST00000546223 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
FAM138D-202ENST00000546223 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
FAM138D-202ENST00000546223 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
FAM138D-202ENST00000546223 PIAS4Q8N2W9 510 aaPredicted RBP18.76■□□□□ 0.59
FAM138D-202ENST00000546223 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
FAM138D-202ENST00000546223 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
FAM138D-202ENST00000546223 MSH5O43196 834 aa18.63■□□□□ 0.57
FAM138D-202ENST00000546223 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
FAM138D-202ENST00000546223 ZNF608Q9ULD9 1512 aaPredicted RBP18.63■□□□□ 0.57
FAM138D-202ENST00000546223 RIMBP3CA6NJZ7 1639 aa18.61■□□□□ 0.57
FAM138D-202ENST00000546223 RIMBP3BA6NNM3 1639 aa18.61■□□□□ 0.57
FAM138D-202ENST00000546223 RIMBP3Q9UFD9 1639 aa18.61■□□□□ 0.57
FAM138D-202ENST00000546223 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
FAM138D-202ENST00000546223 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
FAM138D-202ENST00000546223 EIF4G3O43432 1585 aaKnown RBP18.51■□□□□ 0.55
FAM138D-202ENST00000546223 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
FAM138D-202ENST00000546223 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
FAM138D-202ENST00000546223 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
FAM138D-202ENST00000546223 CHD1O14646 1710 aa18.44■□□□□ 0.54
FAM138D-202ENST00000546223 AQRO60306 1485 aaKnown RBP eCLIP18.41■□□□□ 0.54
FAM138D-202ENST00000546223 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
FAM138D-202ENST00000546223 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
FAM138D-202ENST00000546223 ARAP1Q96P48 1450 aa18.32■□□□□ 0.52
FAM138D-202ENST00000546223 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
FAM138D-202ENST00000546223 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
FAM138D-202ENST00000546223 SOGA1O94964 1423 aa18.27■□□□□ 0.52
FAM138D-202ENST00000546223 TDRD9Q8NDG6 1382 aaKnown RBP18.25■□□□□ 0.51
FAM138D-202ENST00000546223 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
FAM138D-202ENST00000546223 FGD5Q6ZNL6 1462 aa18.23■□□□□ 0.51
FAM138D-202ENST00000546223 FBLN2P98095 1184 aa18.23■□□□□ 0.51
FAM138D-202ENST00000546223 CUX1P39880 1505 aa18.21■□□□□ 0.51
FAM138D-202ENST00000546223 SNAPC4Q5SXM2 1469 aa18.2■□□□□ 0.5
FAM138D-202ENST00000546223 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
FAM138D-202ENST00000546223 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
FAM138D-202ENST00000546223 GRIN2BQ13224 1484 aa18.14■□□□□ 0.5
FAM138D-202ENST00000546223 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
FAM138D-202ENST00000546223 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
FAM138D-202ENST00000546223 CHMP7Q8WUX9 453 aaPredicted RBP18.11■□□□□ 0.49
FAM138D-202ENST00000546223 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
FAM138D-202ENST00000546223 GAPVD1Q14C86 1478 aa18.06■□□□□ 0.48
FAM138D-202ENST00000546223 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
FAM138D-202ENST00000546223 ABCA10Q8WWZ4 1543 aa18.04■□□□□ 0.48
FAM138D-202ENST00000546223 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
FAM138D-202ENST00000546223 ERCC6L2Q5T890 1561 aa17.91■□□□□ 0.46
FAM138D-202ENST00000546223 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
FAM138D-202ENST00000546223 NUP160Q12769 1436 aa17.9■□□□□ 0.46
FAM138D-202ENST00000546223 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms