RNA–Protein interactions for RNA: ENST00000546089.5

TRPT1-215, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 3 BASIC

Gene TRPT1, Length 684 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-215ENST00000546089 NISCHQ9Y2I1 1504 aa26.68■■□□□ 1.86
TRPT1-215ENST00000546089 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
TRPT1-215ENST00000546089 ABCC9O60706 1549 aa23.95■■□□□ 1.43
TRPT1-215ENST00000546089 RB1CC1Q8TDY2 1594 aa22.74■■□□□ 1.23
TRPT1-215ENST00000546089 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
TRPT1-215ENST00000546089 NACADO15069 1562 aa22.55■■□□□ 1.2
TRPT1-215ENST00000546089 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.18
TRPT1-215ENST00000546089 DNAJC5BQ9UF47 199 aa22.34■■□□□ 1.17
TRPT1-215ENST00000546089 PABPN1Q86U42 306 aaKnown RBP eCLIP22.28■■□□□ 1.16
TRPT1-215ENST00000546089 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
TRPT1-215ENST00000546089 BICRAQ9NZM4 1560 aa22.14■■□□□ 1.13
TRPT1-215ENST00000546089 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.13
TRPT1-215ENST00000546089 SCRIBQ14160 1630 aa21.97■■□□□ 1.11
TRPT1-215ENST00000546089 DCAF1Q9Y4B6 1507 aa21.94■■□□□ 1.1
TRPT1-215ENST00000546089 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
TRPT1-215ENST00000546089 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
TRPT1-215ENST00000546089 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
TRPT1-215ENST00000546089 CECR2Q9BXF3 1484 aa21.5■■□□□ 1.03
TRPT1-215ENST00000546089 SMARCA4P51532 1647 aa20.88■□□□□ 0.93
TRPT1-215ENST00000546089 ATAD2BQ9ULI0 1458 aa20.79■□□□□ 0.92
TRPT1-215ENST00000546089 NCAPD3P42695 1498 aa20.76■□□□□ 0.91
TRPT1-215ENST00000546089 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
TRPT1-215ENST00000546089 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
TRPT1-215ENST00000546089 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
TRPT1-215ENST00000546089 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
TRPT1-215ENST00000546089 BAZ1BQ9UIG0 1483 aaKnown RBP20.63■□□□□ 0.89
TRPT1-215ENST00000546089 NESP48681 1621 aa20.63■□□□□ 0.89
TRPT1-215ENST00000546089 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
TRPT1-215ENST00000546089 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
TRPT1-215ENST00000546089 WIZO95785 1651 aa20.48■□□□□ 0.87
TRPT1-215ENST00000546089 CUX2O14529 1486 aa20.47■□□□□ 0.87
TRPT1-215ENST00000546089 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
TRPT1-215ENST00000546089 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
TRPT1-215ENST00000546089 LAMC3Q9Y6N6 1575 aa20.37■□□□□ 0.85
TRPT1-215ENST00000546089 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
TRPT1-215ENST00000546089 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
TRPT1-215ENST00000546089 SUPT5HO00267 1087 aaKnown RBP20.24■□□□□ 0.83
TRPT1-215ENST00000546089 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
TRPT1-215ENST00000546089 CADPSQ9ULU8 1353 aa20.15■□□□□ 0.82
TRPT1-215ENST00000546089 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
TRPT1-215ENST00000546089 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
TRPT1-215ENST00000546089 WDR62O43379 1518 aa20.05■□□□□ 0.8
TRPT1-215ENST00000546089 CEP164Q9UPV0 1460 aa20.04■□□□□ 0.8
TRPT1-215ENST00000546089 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
TRPT1-215ENST00000546089 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
TRPT1-215ENST00000546089 CFTRP13569 1480 aa19.96■□□□□ 0.79
TRPT1-215ENST00000546089 URB2Q14146 1524 aaKnown RBP19.89■□□□□ 0.77
TRPT1-215ENST00000546089 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
TRPT1-215ENST00000546089 TRIM41Q8WV44 630 aa19.66■□□□□ 0.74
TRPT1-215ENST00000546089 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
TRPT1-215ENST00000546089 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
TRPT1-215ENST00000546089 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
TRPT1-215ENST00000546089 EIF4G3O43432 1585 aaKnown RBP19.59■□□□□ 0.73
TRPT1-215ENST00000546089 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
TRPT1-215ENST00000546089 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
TRPT1-215ENST00000546089 CHD1O14646 1710 aa19.51■□□□□ 0.71
TRPT1-215ENST00000546089 OSCARQ8IYS5 282 aa19.5■□□□□ 0.71
TRPT1-215ENST00000546089 ABCC8Q09428 1581 aa19.48■□□□□ 0.71
TRPT1-215ENST00000546089 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
TRPT1-215ENST00000546089 RIMBP3CA6NJZ7 1639 aa19.45■□□□□ 0.7
TRPT1-215ENST00000546089 RIMBP3BA6NNM3 1639 aa19.45■□□□□ 0.7
TRPT1-215ENST00000546089 RIMBP3Q9UFD9 1639 aa19.45■□□□□ 0.7
TRPT1-215ENST00000546089 AQRO60306 1485 aaKnown RBP eCLIP19.45■□□□□ 0.74e-8■■■■■ 31.9
TRPT1-215ENST00000546089 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
TRPT1-215ENST00000546089 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
TRPT1-215ENST00000546089 CUX1P39880 1505 aa19.39■□□□□ 0.69
TRPT1-215ENST00000546089 FGD5Q6ZNL6 1462 aa19.38■□□□□ 0.69
TRPT1-215ENST00000546089 ARHGEF11O15085 1522 aa19.33■□□□□ 0.68
TRPT1-215ENST00000546089 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
TRPT1-215ENST00000546089 SOGA1O94964 1423 aa19.32■□□□□ 0.68
TRPT1-215ENST00000546089 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
TRPT1-215ENST00000546089 FBLN2P98095 1184 aa19.31■□□□□ 0.68
TRPT1-215ENST00000546089 PBRM1Q86U86 1689 aa19.28■□□□□ 0.68
TRPT1-215ENST00000546089 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
TRPT1-215ENST00000546089 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
TRPT1-215ENST00000546089 ABCA5Q8WWZ7 1642 aa19.15■□□□□ 0.66
TRPT1-215ENST00000546089 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
TRPT1-215ENST00000546089 CLASP1Q7Z460 1538 aa19.14■□□□□ 0.65
TRPT1-215ENST00000546089 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
TRPT1-215ENST00000546089 SYNJ1O43426 1573 aa19.13■□□□□ 0.65
TRPT1-215ENST00000546089 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
TRPT1-215ENST00000546089 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
TRPT1-215ENST00000546089 GAPVD1Q14C86 1478 aa19.11■□□□□ 0.65
TRPT1-215ENST00000546089 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
TRPT1-215ENST00000546089 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
TRPT1-215ENST00000546089 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
TRPT1-215ENST00000546089 SYNJ2O15056 1496 aa19.08■□□□□ 0.64
TRPT1-215ENST00000546089 TOP2BQ02880 1626 aa19.07■□□□□ 0.64
TRPT1-215ENST00000546089 ADAMTS12P58397 1594 aa19.02■□□□□ 0.63
TRPT1-215ENST00000546089 CEP170Q5SW79 1584 aa18.95■□□□□ 0.62
TRPT1-215ENST00000546089 ERCC6L2Q5T890 1561 aa18.95■□□□□ 0.62
TRPT1-215ENST00000546089 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
TRPT1-215ENST00000546089 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
TRPT1-215ENST00000546089 ERICH3Q5RHP9 1530 aa18.84■□□□□ 0.61
TRPT1-215ENST00000546089 EEA1Q15075 1411 aa18.84■□□□□ 0.61
TRPT1-215ENST00000546089 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.6
TRPT1-215ENST00000546089 NUP160Q12769 1436 aa18.82■□□□□ 0.6
TRPT1-215ENST00000546089 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
TRPT1-215ENST00000546089 RUSC2Q8N2Y8 1516 aa18.75■□□□□ 0.59
TRPT1-215ENST00000546089 PRG4Q92954 1404 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 191.1 ms