RNA–Protein interactions for RNA: ENST00000545923.3

AC140847.2-201, humanhuman

TSL 3 BASIC

Gene AC140847.2, Length 501 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC140847.2-201ENST00000545923 NISCHQ9Y2I1 1504 aa31.32■■■□□ 2.6
AC140847.2-201ENST00000545923 ABCC9O60706 1549 aa29.53■■■□□ 2.32
AC140847.2-201ENST00000545923 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
AC140847.2-201ENST00000545923 DNAJC5BQ9UF47 199 aa28.55■■■□□ 2.16
AC140847.2-201ENST00000545923 RB1CC1Q8TDY2 1594 aa27.71■■■□□ 2.03
AC140847.2-201ENST00000545923 PABPN1Q86U42 306 aaKnown RBP eCLIP27.32■■□□□ 1.96
AC140847.2-201ENST00000545923 NACADO15069 1562 aa27.26■■□□□ 1.95
AC140847.2-201ENST00000545923 UNC13AQ9UPW8 1703 aa27.05■■□□□ 1.92
AC140847.2-201ENST00000545923 DNAJC5Q9H3Z4 198 aa27.02■■□□□ 1.92
AC140847.2-201ENST00000545923 DCAF8L2P0C7V8 631 aa26.92■■□□□ 1.9
AC140847.2-201ENST00000545923 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
AC140847.2-201ENST00000545923 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
AC140847.2-201ENST00000545923 CC2D2AQ9P2K1 1620 aa26.63■■□□□ 1.85
AC140847.2-201ENST00000545923 MYO15BQ96JP2 1530 aa26.54■■□□□ 1.84
AC140847.2-201ENST00000545923 SHROOM4Q9ULL8 1493 aa26.48■■□□□ 1.83
AC140847.2-201ENST00000545923 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.8
AC140847.2-201ENST00000545923 SCRIBQ14160 1630 aa25.95■■□□□ 1.74
AC140847.2-201ENST00000545923 CUX2O14529 1486 aa25.91■■□□□ 1.74
AC140847.2-201ENST00000545923 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.72
AC140847.2-201ENST00000545923 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
AC140847.2-201ENST00000545923 ERCC6Q03468 1493 aa25.62■■□□□ 1.69
AC140847.2-201ENST00000545923 TRIM41Q8WV44 630 aa25.43■■□□□ 1.66
AC140847.2-201ENST00000545923 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
AC140847.2-201ENST00000545923 NESP48681 1621 aa25.05■■□□□ 1.6
AC140847.2-201ENST00000545923 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
AC140847.2-201ENST00000545923 ATAD2BQ9ULI0 1458 aa24.92■■□□□ 1.58
AC140847.2-201ENST00000545923 HMGXB3Q12766 1538 aa24.89■■□□□ 1.57
AC140847.2-201ENST00000545923 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
AC140847.2-201ENST00000545923 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
AC140847.2-201ENST00000545923 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
AC140847.2-201ENST00000545923 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
AC140847.2-201ENST00000545923 BAZ1BQ9UIG0 1483 aaKnown RBP24.66■■□□□ 1.54
AC140847.2-201ENST00000545923 SMARCA4P51532 1647 aa24.65■■□□□ 1.54
AC140847.2-201ENST00000545923 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
AC140847.2-201ENST00000545923 OSCARQ8IYS5 282 aa24.57■■□□□ 1.52
AC140847.2-201ENST00000545923 MRC2Q9UBG0 1479 aa24.5■■□□□ 1.51
AC140847.2-201ENST00000545923 WDR62O43379 1518 aa24.46■■□□□ 1.51
AC140847.2-201ENST00000545923 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
AC140847.2-201ENST00000545923 CADPSQ9ULU8 1353 aa24.35■■□□□ 1.49
AC140847.2-201ENST00000545923 RIMBP3CA6NJZ7 1639 aa24.33■■□□□ 1.49
AC140847.2-201ENST00000545923 RIMBP3BA6NNM3 1639 aa24.33■■□□□ 1.49
AC140847.2-201ENST00000545923 RIMBP3Q9UFD9 1639 aa24.33■■□□□ 1.49
AC140847.2-201ENST00000545923 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
AC140847.2-201ENST00000545923 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
AC140847.2-201ENST00000545923 TRHP20396 242 aaPredicted RBP24.15■■□□□ 1.46
AC140847.2-201ENST00000545923 ARHGEF11O15085 1522 aa24.14■■□□□ 1.45
AC140847.2-201ENST00000545923 MROH2BQ7Z745 1585 aa24.09■■□□□ 1.45
AC140847.2-201ENST00000545923 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
AC140847.2-201ENST00000545923 CYB5RLQ6IPT4 315 aa24.04■■□□□ 1.44
AC140847.2-201ENST00000545923 URB2Q14146 1524 aaKnown RBP23.91■■□□□ 1.42
AC140847.2-201ENST00000545923 CFTRP13569 1480 aa23.84■■□□□ 1.41
AC140847.2-201ENST00000545923 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
AC140847.2-201ENST00000545923 WIZO95785 1651 aa23.78■■□□□ 1.4
AC140847.2-201ENST00000545923 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
AC140847.2-201ENST00000545923 IFT140Q96RY7 1462 aa23.76■■□□□ 1.39
AC140847.2-201ENST00000545923 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
AC140847.2-201ENST00000545923 CHD1O14646 1710 aa23.66■■□□□ 1.38
AC140847.2-201ENST00000545923 EIF4G3O43432 1585 aaKnown RBP23.63■■□□□ 1.37
AC140847.2-201ENST00000545923 PRDM2Q13029 1718 aa23.58■■□□□ 1.37
AC140847.2-201ENST00000545923 FBLN2P98095 1184 aa23.56■■□□□ 1.36
AC140847.2-201ENST00000545923 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
AC140847.2-201ENST00000545923 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.34
AC140847.2-201ENST00000545923 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
AC140847.2-201ENST00000545923 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
AC140847.2-201ENST00000545923 TARBP1Q13395 1621 aaKnown RBP23.36■■□□□ 1.33
AC140847.2-201ENST00000545923 CLASP1Q7Z460 1538 aa23.34■■□□□ 1.33
AC140847.2-201ENST00000545923 DNMBPQ6XZF7 1577 aa23.34■■□□□ 1.33
AC140847.2-201ENST00000545923 SYNJ1O43426 1573 aa23.28■■□□□ 1.32
AC140847.2-201ENST00000545923 ILDR1Q86SU0 546 aaPredicted RBP23.26■■□□□ 1.31
AC140847.2-201ENST00000545923 CHMP7Q8WUX9 453 aaPredicted RBP23.22■■□□□ 1.31
AC140847.2-201ENST00000545923 GAPVD1Q14C86 1478 aa23.19■■□□□ 1.3
AC140847.2-201ENST00000545923 SNAPC4Q5SXM2 1469 aa23.19■■□□□ 1.3
AC140847.2-201ENST00000545923 POLA1P09884 1462 aaPredicted RBP23.18■■□□□ 1.3
AC140847.2-201ENST00000545923 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
AC140847.2-201ENST00000545923 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
AC140847.2-201ENST00000545923 MAGI1Q96QZ7 1491 aaPredicted RBP23.12■■□□□ 1.29
AC140847.2-201ENST00000545923 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
AC140847.2-201ENST00000545923 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
AC140847.2-201ENST00000545923 SOGA1O94964 1423 aa23.09■■□□□ 1.29
AC140847.2-201ENST00000545923 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
AC140847.2-201ENST00000545923 GRIN2BQ13224 1484 aa23.01■■□□□ 1.27
AC140847.2-201ENST00000545923 KIF13AQ9H1H9 1805 aa22.96■■□□□ 1.27
AC140847.2-201ENST00000545923 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
AC140847.2-201ENST00000545923 KDM4FA0A1W2PPD8 638 aa22.88■■□□□ 1.25
AC140847.2-201ENST00000545923 ERCC6L2Q5T890 1561 aa22.87■■□□□ 1.25
AC140847.2-201ENST00000545923 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
AC140847.2-201ENST00000545923 CEP170Q5SW79 1584 aa22.78■■□□□ 1.24
AC140847.2-201ENST00000545923 FAM69CQ0P6D2 419 aa22.74■■□□□ 1.23
AC140847.2-201ENST00000545923 KDM6BO15054 1643 aa22.71■■□□□ 1.23
AC140847.2-201ENST00000545923 GRIN2AQ12879 1464 aa22.7■■□□□ 1.22
AC140847.2-201ENST00000545923 ABCC10Q5T3U5 1492 aa22.7■■□□□ 1.22
AC140847.2-201ENST00000545923 CUX1P39880 1505 aa22.7■■□□□ 1.22
AC140847.2-201ENST00000545923 SHROOM2Q13796 1616 aa22.68■■□□□ 1.22
AC140847.2-201ENST00000545923 NUP160Q12769 1436 aa22.65■■□□□ 1.22
AC140847.2-201ENST00000545923 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.21
AC140847.2-201ENST00000545923 NPM1P06748 294 aaKnown RBP eCLIP22.63■■□□□ 1.21
AC140847.2-201ENST00000545923 DIP2BQ9P265 1576 aa22.6■■□□□ 1.21
AC140847.2-201ENST00000545923 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
AC140847.2-201ENST00000545923 MAPKBP1O60336 1514 aa22.58■■□□□ 1.21
AC140847.2-201ENST00000545923 ADAMTS12P58397 1594 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms