RNA–Protein interactions for RNA: ENST00000545855.1

ARF3-210, Transcript of ADP ribosylation factor 3, humanhuman

TSL 2

Gene ARF3, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-210ENST00000545855 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
ARF3-210ENST00000545855 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
ARF3-210ENST00000545855 ABCC9O60706 1549 aa21.2■□□□□ 0.98
ARF3-210ENST00000545855 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
ARF3-210ENST00000545855 NACADO15069 1562 aa20.16■□□□□ 0.82
ARF3-210ENST00000545855 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
ARF3-210ENST00000545855 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
ARF3-210ENST00000545855 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
ARF3-210ENST00000545855 ZCCHC6Q5VYS8 1495 aaKnown RBP19.75■□□□□ 0.75
ARF3-210ENST00000545855 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
ARF3-210ENST00000545855 DCAF1Q9Y4B6 1507 aa19.72■□□□□ 0.75
ARF3-210ENST00000545855 UNC13AQ9UPW8 1703 aa19.69■□□□□ 0.74
ARF3-210ENST00000545855 BICRAQ9NZM4 1560 aa19.66■□□□□ 0.74
ARF3-210ENST00000545855 SHROOM4Q9ULL8 1493 aa19.49■□□□□ 0.71
ARF3-210ENST00000545855 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
ARF3-210ENST00000545855 EIF4G1Q04637 1599 aaKnown RBP19.16■□□□□ 0.66
ARF3-210ENST00000545855 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
ARF3-210ENST00000545855 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
ARF3-210ENST00000545855 NCAPD3P42695 1498 aa18.63■□□□□ 0.57
ARF3-210ENST00000545855 ATAD2BQ9ULI0 1458 aa18.55■□□□□ 0.56
ARF3-210ENST00000545855 SMARCA4P51532 1647 aa18.52■□□□□ 0.55
ARF3-210ENST00000545855 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
ARF3-210ENST00000545855 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
ARF3-210ENST00000545855 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
ARF3-210ENST00000545855 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
ARF3-210ENST00000545855 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
ARF3-210ENST00000545855 CUX2O14529 1486 aa18.32■□□□□ 0.52
ARF3-210ENST00000545855 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
ARF3-210ENST00000545855 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
ARF3-210ENST00000545855 NESP48681 1621 aa18.23■□□□□ 0.51
ARF3-210ENST00000545855 DNAJC5Q9H3Z4 198 aa18.21■□□□□ 0.51
ARF3-210ENST00000545855 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
ARF3-210ENST00000545855 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
ARF3-210ENST00000545855 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
ARF3-210ENST00000545855 WIZO95785 1651 aa18.05■□□□□ 0.48
ARF3-210ENST00000545855 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
ARF3-210ENST00000545855 RSF1Q96T23 1441 aaPredicted RBP18.01■□□□□ 0.47
ARF3-210ENST00000545855 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
ARF3-210ENST00000545855 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
ARF3-210ENST00000545855 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
ARF3-210ENST00000545855 CFTRP13569 1480 aa17.87■□□□□ 0.45
ARF3-210ENST00000545855 WDR62O43379 1518 aa17.86■□□□□ 0.45
ARF3-210ENST00000545855 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
ARF3-210ENST00000545855 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
ARF3-210ENST00000545855 CCDC88BA6NC98 1476 aa17.67■□□□□ 0.42
ARF3-210ENST00000545855 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
ARF3-210ENST00000545855 SUPT5HO00267 1087 aaKnown RBP17.6■□□□□ 0.41
ARF3-210ENST00000545855 PRDM2Q13029 1718 aa17.58■□□□□ 0.41
ARF3-210ENST00000545855 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
ARF3-210ENST00000545855 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
ARF3-210ENST00000545855 TOPBP1Q92547 1522 aa17.48■□□□□ 0.39
ARF3-210ENST00000545855 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
ARF3-210ENST00000545855 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
ARF3-210ENST00000545855 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
ARF3-210ENST00000545855 TRIM41Q8WV44 630 aa17.34■□□□□ 0.37
ARF3-210ENST00000545855 TARBP1Q13395 1621 aaKnown RBP17.32■□□□□ 0.36
ARF3-210ENST00000545855 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
ARF3-210ENST00000545855 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
ARF3-210ENST00000545855 AQRO60306 1485 aaKnown RBP eCLIP17.26■□□□□ 0.35
ARF3-210ENST00000545855 SOGA1O94964 1423 aa17.23■□□□□ 0.35
ARF3-210ENST00000545855 RAD54L2Q9Y4B4 1467 aa17.22■□□□□ 0.35
ARF3-210ENST00000545855 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
ARF3-210ENST00000545855 WDR97A6NE52 1622 aa17.2■□□□□ 0.34
ARF3-210ENST00000545855 CUX1P39880 1505 aa17.2■□□□□ 0.34
ARF3-210ENST00000545855 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
ARF3-210ENST00000545855 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
ARF3-210ENST00000545855 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
ARF3-210ENST00000545855 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
ARF3-210ENST00000545855 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
ARF3-210ENST00000545855 CHD1O14646 1710 aa17.12■□□□□ 0.33
ARF3-210ENST00000545855 GRIN2BQ13224 1484 aa17.1■□□□□ 0.33
ARF3-210ENST00000545855 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
ARF3-210ENST00000545855 FBLN2P98095 1184 aa17.09■□□□□ 0.33
ARF3-210ENST00000545855 MAGI1Q96QZ7 1491 aaPredicted RBP17.09■□□□□ 0.33
ARF3-210ENST00000545855 ABCA10Q8WWZ4 1543 aa17.05■□□□□ 0.32
ARF3-210ENST00000545855 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
ARF3-210ENST00000545855 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.32
ARF3-210ENST00000545855 GAPVD1Q14C86 1478 aa17.02■□□□□ 0.32
ARF3-210ENST00000545855 CHMP7Q8WUX9 453 aaPredicted RBP17.02■□□□□ 0.32
ARF3-210ENST00000545855 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
ARF3-210ENST00000545855 CYB5RLQ6IPT4 315 aa17■□□□□ 0.31
ARF3-210ENST00000545855 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
ARF3-210ENST00000545855 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
ARF3-210ENST00000545855 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
ARF3-210ENST00000545855 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
ARF3-210ENST00000545855 PBRM1Q86U86 1689 aa16.95■□□□□ 0.3
ARF3-210ENST00000545855 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
ARF3-210ENST00000545855 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
ARF3-210ENST00000545855 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
ARF3-210ENST00000545855 FHAD1B1AJZ9 1412 aa16.84■□□□□ 0.29
ARF3-210ENST00000545855 NUP160Q12769 1436 aa16.83■□□□□ 0.28
ARF3-210ENST00000545855 ERICH3Q5RHP9 1530 aa16.83■□□□□ 0.28
ARF3-210ENST00000545855 CEP170Q5SW79 1584 aa16.77■□□□□ 0.28
ARF3-210ENST00000545855 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
ARF3-210ENST00000545855 SHROOM2Q13796 1616 aa16.72■□□□□ 0.27
ARF3-210ENST00000545855 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
ARF3-210ENST00000545855 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
ARF3-210ENST00000545855 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
ARF3-210ENST00000545855 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
ARF3-210ENST00000545855 IGF1RP08069 1367 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms