RNA–Protein interactions for RNA: ENST00000545466.1

C1R-213, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-213ENST00000545466 NISCHQ9Y2I1 1504 aa19.17■□□□□ 0.66
C1R-213ENST00000545466 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
C1R-213ENST00000545466 ABCC9O60706 1549 aa16.9■□□□□ 0.3
C1R-213ENST00000545466 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
C1R-213ENST00000545466 NACADO15069 1562 aa16.08■□□□□ 0.16
C1R-213ENST00000545466 DCAF8L2P0C7V8 631 aa15.98■□□□□ 0.15
C1R-213ENST00000545466 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
C1R-213ENST00000545466 ZCCHC6Q5VYS8 1495 aaKnown RBP15.94■□□□□ 0.14
C1R-213ENST00000545466 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
C1R-213ENST00000545466 DCAF1Q9Y4B6 1507 aa15.82■□□□□ 0.12
C1R-213ENST00000545466 BICRAQ9NZM4 1560 aa15.8■□□□□ 0.12
C1R-213ENST00000545466 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
C1R-213ENST00000545466 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
C1R-213ENST00000545466 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
C1R-213ENST00000545466 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
C1R-213ENST00000545466 EIF4G1Q04637 1599 aaKnown RBP15.31■□□□□ 0.04
C1R-213ENST00000545466 CC2D2AQ9P2K1 1620 aa15.31■□□□□ 0.04
C1R-213ENST00000545466 CECR2Q9BXF3 1484 aa15.16■□□□□ 0.02
C1R-213ENST00000545466 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
C1R-213ENST00000545466 NCAPD3P42695 1498 aa14.87□□□□□ -0.03
C1R-213ENST00000545466 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
C1R-213ENST00000545466 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
C1R-213ENST00000545466 BAZ1AQ9NRL2 1556 aaPredicted RBP14.81□□□□□ -0.04
C1R-213ENST00000545466 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
C1R-213ENST00000545466 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
C1R-213ENST00000545466 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
C1R-213ENST00000545466 WIZO95785 1651 aa14.68□□□□□ -0.06
C1R-213ENST00000545466 BAZ1BQ9UIG0 1483 aaKnown RBP14.67□□□□□ -0.06
C1R-213ENST00000545466 NESP48681 1621 aa14.64□□□□□ -0.07
C1R-213ENST00000545466 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
C1R-213ENST00000545466 CHIC1Q5VXU3 224 aa14.49□□□□□ -0.09
C1R-213ENST00000545466 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
C1R-213ENST00000545466 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
C1R-213ENST00000545466 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
C1R-213ENST00000545466 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
C1R-213ENST00000545466 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
C1R-213ENST00000545466 CUX2O14529 1486 aa14.4□□□□□ -0.1
C1R-213ENST00000545466 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
C1R-213ENST00000545466 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
C1R-213ENST00000545466 CFTRP13569 1480 aa14.31□□□□□ -0.12
C1R-213ENST00000545466 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
C1R-213ENST00000545466 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
C1R-213ENST00000545466 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
C1R-213ENST00000545466 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
C1R-213ENST00000545466 WDR62O43379 1518 aa14.23□□□□□ -0.13
C1R-213ENST00000545466 DNAJC5Q9H3Z4 198 aa14.21□□□□□ -0.13
C1R-213ENST00000545466 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
C1R-213ENST00000545466 URB2Q14146 1524 aaKnown RBP14.18□□□□□ -0.14
C1R-213ENST00000545466 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
C1R-213ENST00000545466 SUPT5HO00267 1087 aaKnown RBP14□□□□□ -0.17
C1R-213ENST00000545466 AEBP2Q6ZN18 517 aaPredicted RBP13.99□□□□□ -0.17
C1R-213ENST00000545466 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
C1R-213ENST00000545466 ZNF608Q9ULD9 1512 aaPredicted RBP13.97□□□□□ -0.17
C1R-213ENST00000545466 TARBP1Q13395 1621 aaKnown RBP13.93□□□□□ -0.18
C1R-213ENST00000545466 IFT140Q96RY7 1462 aa13.91□□□□□ -0.18
C1R-213ENST00000545466 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
C1R-213ENST00000545466 CUX1P39880 1505 aa13.9□□□□□ -0.19
C1R-213ENST00000545466 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
C1R-213ENST00000545466 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
C1R-213ENST00000545466 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
C1R-213ENST00000545466 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.19
C1R-213ENST00000545466 FGD5Q6ZNL6 1462 aa13.83□□□□□ -0.2
C1R-213ENST00000545466 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
C1R-213ENST00000545466 SOGA1O94964 1423 aa13.79□□□□□ -0.2
C1R-213ENST00000545466 CHD1O14646 1710 aa13.78□□□□□ -0.2
C1R-213ENST00000545466 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
C1R-213ENST00000545466 OSCARQ8IYS5 282 aa13.76□□□□□ -0.21
C1R-213ENST00000545466 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
C1R-213ENST00000545466 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
C1R-213ENST00000545466 TOP2BQ02880 1626 aa13.7□□□□□ -0.22
C1R-213ENST00000545466 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
C1R-213ENST00000545466 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
C1R-213ENST00000545466 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
C1R-213ENST00000545466 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
C1R-213ENST00000545466 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
C1R-213ENST00000545466 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
C1R-213ENST00000545466 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
C1R-213ENST00000545466 WRNQ14191 1432 aaPredicted RBP eCLIP13.66□□□□□ -0.22
C1R-213ENST00000545466 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
C1R-213ENST00000545466 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
C1R-213ENST00000545466 TRIM41Q8WV44 630 aa13.62□□□□□ -0.23
C1R-213ENST00000545466 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
C1R-213ENST00000545466 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
C1R-213ENST00000545466 CLASP1Q7Z460 1538 aa13.59□□□□□ -0.23
C1R-213ENST00000545466 FBLN2P98095 1184 aa13.59□□□□□ -0.23
C1R-213ENST00000545466 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
C1R-213ENST00000545466 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
C1R-213ENST00000545466 ARAP1Q96P48 1450 aa13.53□□□□□ -0.24
C1R-213ENST00000545466 CHMP7Q8WUX9 453 aaPredicted RBP13.52□□□□□ -0.25
C1R-213ENST00000545466 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
C1R-213ENST00000545466 GRIN2AQ12879 1464 aa13.49□□□□□ -0.25
C1R-213ENST00000545466 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
C1R-213ENST00000545466 ERCC6L2Q5T890 1561 aa13.47□□□□□ -0.25
C1R-213ENST00000545466 CYB5RLQ6IPT4 315 aa13.46□□□□□ -0.25
C1R-213ENST00000545466 NUP160Q12769 1436 aa13.46□□□□□ -0.26
C1R-213ENST00000545466 FHAD1B1AJZ9 1412 aa13.44□□□□□ -0.26
C1R-213ENST00000545466 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
C1R-213ENST00000545466 IGF1RP08069 1367 aa13.41□□□□□ -0.26
C1R-213ENST00000545466 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
C1R-213ENST00000545466 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms