RNA–Protein interactions for RNA: ENST00000545381.5

PPFIBP1-217, Transcript of PPFIA binding protein 1, humanhuman

TSL 1 (best)

Gene PPFIBP1, Length 1,191 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-217ENST00000545381 NISCHQ9Y2I1 1504 aa25.18■■□□□ 1.62
PPFIBP1-217ENST00000545381 AEBP2Q6ZN18 517 aaPredicted RBP24.79■■□□□ 1.56
PPFIBP1-217ENST00000545381 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
PPFIBP1-217ENST00000545381 ABCC9O60706 1549 aa23.34■■□□□ 1.33
PPFIBP1-217ENST00000545381 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
PPFIBP1-217ENST00000545381 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
PPFIBP1-217ENST00000545381 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.11
PPFIBP1-217ENST00000545381 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
PPFIBP1-217ENST00000545381 NACADO15069 1562 aa21.68■■□□□ 1.06
PPFIBP1-217ENST00000545381 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
PPFIBP1-217ENST00000545381 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
PPFIBP1-217ENST00000545381 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
PPFIBP1-217ENST00000545381 BICRAQ9NZM4 1560 aa21.35■■□□□ 1.01
PPFIBP1-217ENST00000545381 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
PPFIBP1-217ENST00000545381 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
PPFIBP1-217ENST00000545381 SENP3Q9H4L4 574 aaPredicted RBP21.07■□□□□ 0.96
PPFIBP1-217ENST00000545381 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
PPFIBP1-217ENST00000545381 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
PPFIBP1-217ENST00000545381 DNAJC5Q9H3Z4 198 aa20.89■□□□□ 0.93
PPFIBP1-217ENST00000545381 EIF4G1Q04637 1599 aaKnown RBP20.87■□□□□ 0.93
PPFIBP1-217ENST00000545381 SCRIBQ14160 1630 aa20.78■□□□□ 0.92
PPFIBP1-217ENST00000545381 ZCCHC6Q5VYS8 1495 aaKnown RBP20.77■□□□□ 0.92
PPFIBP1-217ENST00000545381 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
PPFIBP1-217ENST00000545381 CUX2O14529 1486 aa20.3■□□□□ 0.84
PPFIBP1-217ENST00000545381 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
PPFIBP1-217ENST00000545381 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
PPFIBP1-217ENST00000545381 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
PPFIBP1-217ENST00000545381 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
PPFIBP1-217ENST00000545381 NESP48681 1621 aa19.91■□□□□ 0.78
PPFIBP1-217ENST00000545381 HMGXB3Q12766 1538 aa19.83■□□□□ 0.77
PPFIBP1-217ENST00000545381 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
PPFIBP1-217ENST00000545381 THOC2Q8NI27 1593 aaKnown RBP19.78■□□□□ 0.76
PPFIBP1-217ENST00000545381 TRIM41Q8WV44 630 aa19.78■□□□□ 0.76
PPFIBP1-217ENST00000545381 SMARCA4P51532 1647 aa19.74■□□□□ 0.75
PPFIBP1-217ENST00000545381 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
PPFIBP1-217ENST00000545381 LAMC3Q9Y6N6 1575 aa19.65■□□□□ 0.74
PPFIBP1-217ENST00000545381 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
PPFIBP1-217ENST00000545381 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
PPFIBP1-217ENST00000545381 PDS5BQ9NTI5 1447 aa19.57■□□□□ 0.72
PPFIBP1-217ENST00000545381 PEG3Q9GZU2 1588 aa19.55■□□□□ 0.72
PPFIBP1-217ENST00000545381 FOXD1Q16676 465 aa19.45■□□□□ 0.7
PPFIBP1-217ENST00000545381 MRC2Q9UBG0 1479 aa19.45■□□□□ 0.7
PPFIBP1-217ENST00000545381 MROH2BQ7Z745 1585 aa19.41■□□□□ 0.7
PPFIBP1-217ENST00000545381 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
PPFIBP1-217ENST00000545381 WDR62O43379 1518 aa19.41■□□□□ 0.7
PPFIBP1-217ENST00000545381 OSCARQ8IYS5 282 aa19.3■□□□□ 0.68
PPFIBP1-217ENST00000545381 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
PPFIBP1-217ENST00000545381 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
PPFIBP1-217ENST00000545381 WIZO95785 1651 aa19.13■□□□□ 0.65
PPFIBP1-217ENST00000545381 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
PPFIBP1-217ENST00000545381 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
PPFIBP1-217ENST00000545381 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
PPFIBP1-217ENST00000545381 URB2Q14146 1524 aaKnown RBP19.08■□□□□ 0.64
PPFIBP1-217ENST00000545381 CFTRP13569 1480 aa19.08■□□□□ 0.64
PPFIBP1-217ENST00000545381 ADRA2BP18089 450 aa19.04■□□□□ 0.64
PPFIBP1-217ENST00000545381 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
PPFIBP1-217ENST00000545381 ARHGEF11O15085 1522 aa19■□□□□ 0.63
PPFIBP1-217ENST00000545381 ZNF608Q9ULD9 1512 aaPredicted RBP18.94■□□□□ 0.62
PPFIBP1-217ENST00000545381 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
PPFIBP1-217ENST00000545381 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
PPFIBP1-217ENST00000545381 TOP2AP11388 1531 aaKnown RBP18.87■□□□□ 0.61
PPFIBP1-217ENST00000545381 TRHP20396 242 aaPredicted RBP18.85■□□□□ 0.61
PPFIBP1-217ENST00000545381 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.6
PPFIBP1-217ENST00000545381 ARAP1Q96P48 1450 aa18.78■□□□□ 0.6
PPFIBP1-217ENST00000545381 PRDM2Q13029 1718 aa18.78■□□□□ 0.6
PPFIBP1-217ENST00000545381 EIF4G3O43432 1585 aaKnown RBP18.78■□□□□ 0.6
PPFIBP1-217ENST00000545381 TOPBP1Q92547 1522 aa18.77■□□□□ 0.6
PPFIBP1-217ENST00000545381 CHD1O14646 1710 aa18.71■□□□□ 0.59
PPFIBP1-217ENST00000545381 AQRO60306 1485 aaKnown RBP eCLIP18.69■□□□□ 0.58
PPFIBP1-217ENST00000545381 ABCC8Q09428 1581 aa18.68■□□□□ 0.58
PPFIBP1-217ENST00000545381 FBLN2P98095 1184 aa18.67■□□□□ 0.58
PPFIBP1-217ENST00000545381 CCDC88BA6NC98 1476 aa18.66■□□□□ 0.58
PPFIBP1-217ENST00000545381 DNMBPQ6XZF7 1577 aa18.65■□□□□ 0.58
PPFIBP1-217ENST00000545381 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
PPFIBP1-217ENST00000545381 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
PPFIBP1-217ENST00000545381 CLASP1Q7Z460 1538 aa18.52■□□□□ 0.56
PPFIBP1-217ENST00000545381 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
PPFIBP1-217ENST00000545381 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
PPFIBP1-217ENST00000545381 PIAS4Q8N2W9 510 aaPredicted RBP18.49■□□□□ 0.55
PPFIBP1-217ENST00000545381 SNAPC4Q5SXM2 1469 aa18.49■□□□□ 0.55
PPFIBP1-217ENST00000545381 SOGA1O94964 1423 aa18.45■□□□□ 0.54
PPFIBP1-217ENST00000545381 SYNJ1O43426 1573 aa18.44■□□□□ 0.54
PPFIBP1-217ENST00000545381 CHMP7Q8WUX9 453 aaPredicted RBP18.44■□□□□ 0.54
PPFIBP1-217ENST00000545381 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
PPFIBP1-217ENST00000545381 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
PPFIBP1-217ENST00000545381 FGD5Q6ZNL6 1462 aa18.37■□□□□ 0.53
PPFIBP1-217ENST00000545381 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
PPFIBP1-217ENST00000545381 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
PPFIBP1-217ENST00000545381 GRIN2BQ13224 1484 aa18.35■□□□□ 0.53
PPFIBP1-217ENST00000545381 CUX1P39880 1505 aa18.27■□□□□ 0.51
PPFIBP1-217ENST00000545381 PBRM1Q86U86 1689 aa18.21■□□□□ 0.51
PPFIBP1-217ENST00000545381 ERCC6L2Q5T890 1561 aa18.2■□□□□ 0.5
PPFIBP1-217ENST00000545381 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
PPFIBP1-217ENST00000545381 GRIN2AQ12879 1464 aa18.12■□□□□ 0.49
PPFIBP1-217ENST00000545381 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
PPFIBP1-217ENST00000545381 CEP170Q5SW79 1584 aa18.12■□□□□ 0.49
PPFIBP1-217ENST00000545381 NUP160Q12769 1436 aa18.08■□□□□ 0.49
PPFIBP1-217ENST00000545381 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
PPFIBP1-217ENST00000545381 ADAMTS12P58397 1594 aa18.04■□□□□ 0.48
PPFIBP1-217ENST00000545381 SHROOM2Q13796 1616 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms