RNA–Protein interactions for RNA: ENST00000545361.5

CYB561A3-220, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4

Gene CYB561A3, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-220ENST00000545361 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.77
CYB561A3-220ENST00000545361 ABCC9O60706 1549 aa24.11■■□□□ 1.45
CYB561A3-220ENST00000545361 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
CYB561A3-220ENST00000545361 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
CYB561A3-220ENST00000545361 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
CYB561A3-220ENST00000545361 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
CYB561A3-220ENST00000545361 RB1CC1Q8TDY2 1594 aa22.73■■□□□ 1.23
CYB561A3-220ENST00000545361 NACADO15069 1562 aa22.46■■□□□ 1.19
CYB561A3-220ENST00000545361 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
CYB561A3-220ENST00000545361 DCAF8L2P0C7V8 631 aa22.28■■□□□ 1.16
CYB561A3-220ENST00000545361 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
CYB561A3-220ENST00000545361 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
CYB561A3-220ENST00000545361 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
CYB561A3-220ENST00000545361 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
CYB561A3-220ENST00000545361 CC2D2AQ9P2K1 1620 aa21.75■■□□□ 1.07
CYB561A3-220ENST00000545361 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
CYB561A3-220ENST00000545361 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
CYB561A3-220ENST00000545361 ZCCHC6Q5VYS8 1495 aaKnown RBP21.57■■□□□ 1.04
CYB561A3-220ENST00000545361 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
CYB561A3-220ENST00000545361 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
CYB561A3-220ENST00000545361 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
CYB561A3-220ENST00000545361 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
CYB561A3-220ENST00000545361 CUX2O14529 1486 aa20.95■□□□□ 0.94
CYB561A3-220ENST00000545361 ERCC6Q03468 1493 aa20.86■□□□□ 0.93
CYB561A3-220ENST00000545361 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
CYB561A3-220ENST00000545361 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
CYB561A3-220ENST00000545361 NESP48681 1621 aa20.59■□□□□ 0.89
CYB561A3-220ENST00000545361 HMGXB3Q12766 1538 aa20.55■□□□□ 0.88
CYB561A3-220ENST00000545361 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
CYB561A3-220ENST00000545361 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
CYB561A3-220ENST00000545361 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
CYB561A3-220ENST00000545361 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
CYB561A3-220ENST00000545361 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
CYB561A3-220ENST00000545361 LAMC3Q9Y6N6 1575 aa20.34■□□□□ 0.85
CYB561A3-220ENST00000545361 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
CYB561A3-220ENST00000545361 PEG3Q9GZU2 1588 aa20.28■□□□□ 0.84
CYB561A3-220ENST00000545361 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
CYB561A3-220ENST00000545361 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
CYB561A3-220ENST00000545361 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
CYB561A3-220ENST00000545361 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
CYB561A3-220ENST00000545361 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
CYB561A3-220ENST00000545361 CADPSQ9ULU8 1353 aa20.1■□□□□ 0.81
CYB561A3-220ENST00000545361 WDR62O43379 1518 aa20.07■□□□□ 0.8
CYB561A3-220ENST00000545361 CEP164Q9UPV0 1460 aa19.94■□□□□ 0.78
CYB561A3-220ENST00000545361 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
CYB561A3-220ENST00000545361 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
CYB561A3-220ENST00000545361 WIZO95785 1651 aa19.87■□□□□ 0.77
CYB561A3-220ENST00000545361 CFTRP13569 1480 aa19.78■□□□□ 0.76
CYB561A3-220ENST00000545361 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
CYB561A3-220ENST00000545361 RIMBP3CA6NJZ7 1639 aa19.72■□□□□ 0.75
CYB561A3-220ENST00000545361 RIMBP3BA6NNM3 1639 aa19.72■□□□□ 0.75
CYB561A3-220ENST00000545361 RIMBP3Q9UFD9 1639 aa19.72■□□□□ 0.75
CYB561A3-220ENST00000545361 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
CYB561A3-220ENST00000545361 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
CYB561A3-220ENST00000545361 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
CYB561A3-220ENST00000545361 RSF1Q96T23 1441 aaPredicted RBP19.56■□□□□ 0.72
CYB561A3-220ENST00000545361 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
CYB561A3-220ENST00000545361 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
CYB561A3-220ENST00000545361 CYB5RLQ6IPT4 315 aa19.5■□□□□ 0.71
CYB561A3-220ENST00000545361 PLPPR3Q6T4P5 718 aa19.49■□□□□ 0.71
CYB561A3-220ENST00000545361 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
CYB561A3-220ENST00000545361 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
CYB561A3-220ENST00000545361 TRHP20396 242 aaPredicted RBP19.43■□□□□ 0.7
CYB561A3-220ENST00000545361 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
CYB561A3-220ENST00000545361 CCDC88BA6NC98 1476 aa19.38■□□□□ 0.69
CYB561A3-220ENST00000545361 CHD1O14646 1710 aa19.37■□□□□ 0.69
CYB561A3-220ENST00000545361 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
CYB561A3-220ENST00000545361 ABCC8Q09428 1581 aa19.35■□□□□ 0.69
CYB561A3-220ENST00000545361 DNMBPQ6XZF7 1577 aa19.33■□□□□ 0.69
CYB561A3-220ENST00000545361 FBLN2P98095 1184 aa19.33■□□□□ 0.68
CYB561A3-220ENST00000545361 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
CYB561A3-220ENST00000545361 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
CYB561A3-220ENST00000545361 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
CYB561A3-220ENST00000545361 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
CYB561A3-220ENST00000545361 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
CYB561A3-220ENST00000545361 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
CYB561A3-220ENST00000545361 SOGA1O94964 1423 aa19.13■□□□□ 0.65
CYB561A3-220ENST00000545361 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
CYB561A3-220ENST00000545361 SYNJ1O43426 1573 aa19.09■□□□□ 0.65
CYB561A3-220ENST00000545361 WDR97A6NE52 1622 aa19.06■□□□□ 0.64
CYB561A3-220ENST00000545361 MAGI1Q96QZ7 1491 aaPredicted RBP19.05■□□□□ 0.64
CYB561A3-220ENST00000545361 FGD5Q6ZNL6 1462 aa19.04■□□□□ 0.64
CYB561A3-220ENST00000545361 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
CYB561A3-220ENST00000545361 SYNJ2O15056 1496 aa19■□□□□ 0.63
CYB561A3-220ENST00000545361 GAPVD1Q14C86 1478 aa18.98■□□□□ 0.63
CYB561A3-220ENST00000545361 CUX1P39880 1505 aa18.95■□□□□ 0.62
CYB561A3-220ENST00000545361 PBRM1Q86U86 1689 aa18.89■□□□□ 0.61
CYB561A3-220ENST00000545361 ERCC6L2Q5T890 1561 aa18.83■□□□□ 0.6
CYB561A3-220ENST00000545361 ABCA5Q8WWZ7 1642 aa18.81■□□□□ 0.6
CYB561A3-220ENST00000545361 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
CYB561A3-220ENST00000545361 GRIN2AQ12879 1464 aa18.77■□□□□ 0.6
CYB561A3-220ENST00000545361 FOXD1Q16676 465 aa18.77■□□□□ 0.6
CYB561A3-220ENST00000545361 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
CYB561A3-220ENST00000545361 NUP160Q12769 1436 aa18.72■□□□□ 0.59
CYB561A3-220ENST00000545361 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
CYB561A3-220ENST00000545361 SHROOM2Q13796 1616 aa18.68■□□□□ 0.58
CYB561A3-220ENST00000545361 KIF13AQ9H1H9 1805 aa18.67■□□□□ 0.58
CYB561A3-220ENST00000545361 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
CYB561A3-220ENST00000545361 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
CYB561A3-220ENST00000545361 PRG4Q92954 1404 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms