RNA–Protein interactions for RNA: ENST00000545097.1

CCR3-208, Transcript of C-C motif chemokine receptor 3, humanhuman

TSL 1 (best) BASIC

Gene CCR3, Length 1,786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR3-208ENST00000545097 NISCHQ9Y2I1 1504 aa20.15■□□□□ 0.82
CCR3-208ENST00000545097 CCDC180Q9P1Z9 1646 aa17.95■□□□□ 0.46
CCR3-208ENST00000545097 ABCC9O60706 1549 aa17.67■□□□□ 0.42
CCR3-208ENST00000545097 RB1CC1Q8TDY2 1594 aa16.87■□□□□ 0.29
CCR3-208ENST00000545097 NACADO15069 1562 aa16.82■□□□□ 0.28
CCR3-208ENST00000545097 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
CCR3-208ENST00000545097 DCAF8L2P0C7V8 631 aa16.77■□□□□ 0.28
CCR3-208ENST00000545097 UNC13AQ9UPW8 1703 aa16.73■□□□□ 0.27
CCR3-208ENST00000545097 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
CCR3-208ENST00000545097 DCAF1Q9Y4B6 1507 aa16.61■□□□□ 0.25
CCR3-208ENST00000545097 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
CCR3-208ENST00000545097 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCR3-208ENST00000545097 SCRIBQ14160 1630 aa16.46■□□□□ 0.23
CCR3-208ENST00000545097 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.21
CCR3-208ENST00000545097 SHROOM4Q9ULL8 1493 aa16.09■□□□□ 0.17
CCR3-208ENST00000545097 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
CCR3-208ENST00000545097 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
CCR3-208ENST00000545097 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
CCR3-208ENST00000545097 SMARCA4P51532 1647 aa15.7■□□□□ 0.1
CCR3-208ENST00000545097 MROH2BQ7Z745 1585 aa15.6■□□□□ 0.09
CCR3-208ENST00000545097 ATAD2BQ9ULI0 1458 aa15.58■□□□□ 0.08
CCR3-208ENST00000545097 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.08
CCR3-208ENST00000545097 NCAPD3P42695 1498 aa15.53■□□□□ 0.08
CCR3-208ENST00000545097 PEG3Q9GZU2 1588 aa15.5■□□□□ 0.07
CCR3-208ENST00000545097 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
CCR3-208ENST00000545097 WIZO95785 1651 aa15.47■□□□□ 0.07
CCR3-208ENST00000545097 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
CCR3-208ENST00000545097 BAZ1BQ9UIG0 1483 aaKnown RBP15.41■□□□□ 0.06
CCR3-208ENST00000545097 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.05
CCR3-208ENST00000545097 NESP48681 1621 aa15.33■□□□□ 0.04
CCR3-208ENST00000545097 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
CCR3-208ENST00000545097 TOP2AP11388 1531 aaKnown RBP15.2■□□□□ 0.02
CCR3-208ENST00000545097 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
CCR3-208ENST00000545097 LAMC3Q9Y6N6 1575 aa15.14■□□□□ 0.01
CCR3-208ENST00000545097 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
CCR3-208ENST00000545097 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
CCR3-208ENST00000545097 CADPSQ9ULU8 1353 aa15.05■□□□□ 0
CCR3-208ENST00000545097 CCDC88BA6NC98 1476 aa15.03■□□□□ -0
CCR3-208ENST00000545097 CFTRP13569 1480 aa14.99□□□□□ -0.01
CCR3-208ENST00000545097 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
CCR3-208ENST00000545097 CUX2O14529 1486 aa14.98□□□□□ -0.01
CCR3-208ENST00000545097 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
CCR3-208ENST00000545097 AEBP2Q6ZN18 517 aaPredicted RBP14.96□□□□□ -0.02
CCR3-208ENST00000545097 FANCD2Q9BXW9 1451 aa14.93□□□□□ -0.02
CCR3-208ENST00000545097 MRC2Q9UBG0 1479 aa14.9□□□□□ -0.02
CCR3-208ENST00000545097 WDR62O43379 1518 aa14.9□□□□□ -0.02
CCR3-208ENST00000545097 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
CCR3-208ENST00000545097 URB2Q14146 1524 aaKnown RBP14.86□□□□□ -0.03
CCR3-208ENST00000545097 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
CCR3-208ENST00000545097 TOPBP1Q92547 1522 aa14.72□□□□□ -0.05
CCR3-208ENST00000545097 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
CCR3-208ENST00000545097 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
CCR3-208ENST00000545097 CUX1P39880 1505 aa14.64□□□□□ -0.07
CCR3-208ENST00000545097 TARBP1Q13395 1621 aaKnown RBP14.62□□□□□ -0.07
CCR3-208ENST00000545097 DNAJC5Q9H3Z4 198 aa14.6□□□□□ -0.07
CCR3-208ENST00000545097 POLA1P09884 1462 aaPredicted RBP14.59□□□□□ -0.07
CCR3-208ENST00000545097 EIF4G3O43432 1585 aaKnown RBP14.57□□□□□ -0.08
CCR3-208ENST00000545097 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
CCR3-208ENST00000545097 IFT140Q96RY7 1462 aa14.56□□□□□ -0.08
CCR3-208ENST00000545097 ABCC8Q09428 1581 aa14.55□□□□□ -0.08
CCR3-208ENST00000545097 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
CCR3-208ENST00000545097 WDR97A6NE52 1622 aa14.53□□□□□ -0.08
CCR3-208ENST00000545097 SYNJ1O43426 1573 aa14.52□□□□□ -0.09
CCR3-208ENST00000545097 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCR3-208ENST00000545097 BIVM-ERCC5R4GMW8 1640 aa14.48□□□□□ -0.09
CCR3-208ENST00000545097 SOGA1O94964 1423 aa14.46□□□□□ -0.09
CCR3-208ENST00000545097 CHD1O14646 1710 aa14.46□□□□□ -0.1
CCR3-208ENST00000545097 TOP2BQ02880 1626 aa14.45□□□□□ -0.1
CCR3-208ENST00000545097 TDRD9Q8NDG6 1382 aaKnown RBP14.43□□□□□ -0.1
CCR3-208ENST00000545097 PBRM1Q86U86 1689 aa14.41□□□□□ -0.1
CCR3-208ENST00000545097 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.1
CCR3-208ENST00000545097 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
CCR3-208ENST00000545097 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
CCR3-208ENST00000545097 SNAPC4Q5SXM2 1469 aa14.36□□□□□ -0.11
CCR3-208ENST00000545097 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
CCR3-208ENST00000545097 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
CCR3-208ENST00000545097 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
CCR3-208ENST00000545097 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.13
CCR3-208ENST00000545097 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.13
CCR3-208ENST00000545097 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.13
CCR3-208ENST00000545097 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
CCR3-208ENST00000545097 ADAMTS12P58397 1594 aa14.25□□□□□ -0.13
CCR3-208ENST00000545097 CLASP1Q7Z460 1538 aa14.23□□□□□ -0.13
CCR3-208ENST00000545097 FBLN2P98095 1184 aa14.23□□□□□ -0.13
CCR3-208ENST00000545097 SYNJ2O15056 1496 aa14.22□□□□□ -0.13
CCR3-208ENST00000545097 ARHGEF11O15085 1522 aa14.2□□□□□ -0.14
CCR3-208ENST00000545097 CEP170Q5SW79 1584 aa14.18□□□□□ -0.14
CCR3-208ENST00000545097 ERICH3Q5RHP9 1530 aa14.17□□□□□ -0.14
CCR3-208ENST00000545097 GRIN2AQ12879 1464 aa14.16□□□□□ -0.14
CCR3-208ENST00000545097 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
CCR3-208ENST00000545097 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
CCR3-208ENST00000545097 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
CCR3-208ENST00000545097 RUSC2Q8N2Y8 1516 aa14.13□□□□□ -0.15
CCR3-208ENST00000545097 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
CCR3-208ENST00000545097 FHAD1B1AJZ9 1412 aa14.11□□□□□ -0.15
CCR3-208ENST00000545097 NUP160Q12769 1436 aa14.09□□□□□ -0.15
CCR3-208ENST00000545097 IGF1RP08069 1367 aa14.07□□□□□ -0.16
CCR3-208ENST00000545097 SHROOM2Q13796 1616 aa14.06□□□□□ -0.16
CCR3-208ENST00000545097 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
CCR3-208ENST00000545097 CUL7Q14999 1698 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms