RNA–Protein interactions for RNA: ENST00000545047.5

GABARAPL1-214, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 4 BASIC

Gene GABARAPL1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-214ENST00000545047 NISCHQ9Y2I1 1504 aa22.94■■□□□ 1.26
GABARAPL1-214ENST00000545047 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
GABARAPL1-214ENST00000545047 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
GABARAPL1-214ENST00000545047 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
GABARAPL1-214ENST00000545047 ABCC9O60706 1549 aa20.49■□□□□ 0.87
GABARAPL1-214ENST00000545047 PHF23Q9BUL5 403 aaPredicted RBP20.03■□□□□ 0.8
GABARAPL1-214ENST00000545047 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
GABARAPL1-214ENST00000545047 NACADO15069 1562 aa19.43■□□□□ 0.7
GABARAPL1-214ENST00000545047 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
GABARAPL1-214ENST00000545047 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
GABARAPL1-214ENST00000545047 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
GABARAPL1-214ENST00000545047 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
GABARAPL1-214ENST00000545047 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
GABARAPL1-214ENST00000545047 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
GABARAPL1-214ENST00000545047 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
GABARAPL1-214ENST00000545047 DCAF1Q9Y4B6 1507 aa18.97■□□□□ 0.63
GABARAPL1-214ENST00000545047 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
GABARAPL1-214ENST00000545047 SHROOM4Q9ULL8 1493 aa18.74■□□□□ 0.59
GABARAPL1-214ENST00000545047 SCRIBQ14160 1630 aa18.71■□□□□ 0.58
GABARAPL1-214ENST00000545047 PLPPR3Q6T4P5 718 aa18.61■□□□□ 0.57
GABARAPL1-214ENST00000545047 CC2D2AQ9P2K1 1620 aa18.53■□□□□ 0.56
GABARAPL1-214ENST00000545047 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
GABARAPL1-214ENST00000545047 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
GABARAPL1-214ENST00000545047 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
GABARAPL1-214ENST00000545047 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
GABARAPL1-214ENST00000545047 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
GABARAPL1-214ENST00000545047 SMARCA2P51531 1590 aa17.83■□□□□ 0.44
GABARAPL1-214ENST00000545047 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
GABARAPL1-214ENST00000545047 BAZ1AQ9NRL2 1556 aaPredicted RBP17.79■□□□□ 0.44
GABARAPL1-214ENST00000545047 PEG3Q9GZU2 1588 aa17.73■□□□□ 0.43
GABARAPL1-214ENST00000545047 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
GABARAPL1-214ENST00000545047 MROH2BQ7Z745 1585 aa17.67■□□□□ 0.42
GABARAPL1-214ENST00000545047 ERCC6Q03468 1493 aa17.67■□□□□ 0.42
GABARAPL1-214ENST00000545047 CUX2O14529 1486 aa17.66■□□□□ 0.42
GABARAPL1-214ENST00000545047 NESP48681 1621 aa17.63■□□□□ 0.41
GABARAPL1-214ENST00000545047 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
GABARAPL1-214ENST00000545047 ADRA2BP18089 450 aa17.53■□□□□ 0.4
GABARAPL1-214ENST00000545047 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
GABARAPL1-214ENST00000545047 FOXD1Q16676 465 aa17.47■□□□□ 0.39
GABARAPL1-214ENST00000545047 THOC2Q8NI27 1593 aaKnown RBP17.46■□□□□ 0.39
GABARAPL1-214ENST00000545047 WIZO95785 1651 aa17.45■□□□□ 0.38
GABARAPL1-214ENST00000545047 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
GABARAPL1-214ENST00000545047 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
GABARAPL1-214ENST00000545047 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
GABARAPL1-214ENST00000545047 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
GABARAPL1-214ENST00000545047 RSF1Q96T23 1441 aaPredicted RBP17.33■□□□□ 0.36
GABARAPL1-214ENST00000545047 MRC2Q9UBG0 1479 aa17.26■□□□□ 0.35
GABARAPL1-214ENST00000545047 WDR62O43379 1518 aa17.24■□□□□ 0.35
GABARAPL1-214ENST00000545047 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
GABARAPL1-214ENST00000545047 CFTRP13569 1480 aa17.22■□□□□ 0.35
GABARAPL1-214ENST00000545047 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
GABARAPL1-214ENST00000545047 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
GABARAPL1-214ENST00000545047 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
GABARAPL1-214ENST00000545047 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
GABARAPL1-214ENST00000545047 KCNA4P22459 653 aa17.03■□□□□ 0.32
GABARAPL1-214ENST00000545047 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
GABARAPL1-214ENST00000545047 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
GABARAPL1-214ENST00000545047 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
GABARAPL1-214ENST00000545047 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
GABARAPL1-214ENST00000545047 ABCC8Q09428 1581 aa16.83■□□□□ 0.28
GABARAPL1-214ENST00000545047 ZNF608Q9ULD9 1512 aaPredicted RBP16.83■□□□□ 0.28
GABARAPL1-214ENST00000545047 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
GABARAPL1-214ENST00000545047 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
GABARAPL1-214ENST00000545047 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
GABARAPL1-214ENST00000545047 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
GABARAPL1-214ENST00000545047 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
GABARAPL1-214ENST00000545047 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
GABARAPL1-214ENST00000545047 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.26
GABARAPL1-214ENST00000545047 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
GABARAPL1-214ENST00000545047 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
GABARAPL1-214ENST00000545047 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
GABARAPL1-214ENST00000545047 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
GABARAPL1-214ENST00000545047 SOGA1O94964 1423 aa16.61■□□□□ 0.25
GABARAPL1-214ENST00000545047 CUX1P39880 1505 aa16.6■□□□□ 0.25
GABARAPL1-214ENST00000545047 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
GABARAPL1-214ENST00000545047 CHD1O14646 1710 aa16.59■□□□□ 0.25
GABARAPL1-214ENST00000545047 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
GABARAPL1-214ENST00000545047 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
GABARAPL1-214ENST00000545047 TDRD9Q8NDG6 1382 aaKnown RBP16.57■□□□□ 0.24
GABARAPL1-214ENST00000545047 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
GABARAPL1-214ENST00000545047 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
GABARAPL1-214ENST00000545047 SUPT5HO00267 1087 aaKnown RBP16.52■□□□□ 0.24
GABARAPL1-214ENST00000545047 SNAPC4Q5SXM2 1469 aa16.5■□□□□ 0.23
GABARAPL1-214ENST00000545047 FBLN2P98095 1184 aa16.5■□□□□ 0.23
GABARAPL1-214ENST00000545047 GRIN2BQ13224 1484 aa16.47■□□□□ 0.23
GABARAPL1-214ENST00000545047 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
GABARAPL1-214ENST00000545047 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
GABARAPL1-214ENST00000545047 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
GABARAPL1-214ENST00000545047 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
GABARAPL1-214ENST00000545047 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
GABARAPL1-214ENST00000545047 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
GABARAPL1-214ENST00000545047 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
GABARAPL1-214ENST00000545047 CHMP7Q8WUX9 453 aaPredicted RBP16.41■□□□□ 0.22
GABARAPL1-214ENST00000545047 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
GABARAPL1-214ENST00000545047 ABCA5Q8WWZ7 1642 aa16.4■□□□□ 0.22
GABARAPL1-214ENST00000545047 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
GABARAPL1-214ENST00000545047 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
GABARAPL1-214ENST00000545047 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
GABARAPL1-214ENST00000545047 WRNQ14191 1432 aaPredicted RBP eCLIP16.34■□□□□ 0.21
GABARAPL1-214ENST00000545047 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms