RNA–Protein interactions for RNA: ENST00000544777.1

KDM5A-211, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-211ENST00000544777 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
KDM5A-211ENST00000544777 ABCC9O60706 1549 aa24.44■■□□□ 1.5
KDM5A-211ENST00000544777 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
KDM5A-211ENST00000544777 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.34
KDM5A-211ENST00000544777 RB1CC1Q8TDY2 1594 aa23.02■■□□□ 1.28
KDM5A-211ENST00000544777 NACADO15069 1562 aa22.7■■□□□ 1.22
KDM5A-211ENST00000544777 PABPN1Q86U42 306 aaKnown RBP eCLIP22.66■■□□□ 1.22
KDM5A-211ENST00000544777 UNC13AQ9UPW8 1703 aa22.55■■□□□ 1.2
KDM5A-211ENST00000544777 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
KDM5A-211ENST00000544777 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.17
KDM5A-211ENST00000544777 MYO15BQ96JP2 1530 aa22.15■■□□□ 1.14
KDM5A-211ENST00000544777 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
KDM5A-211ENST00000544777 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
KDM5A-211ENST00000544777 DNAJC5Q9H3Z4 198 aa22.01■■□□□ 1.11
KDM5A-211ENST00000544777 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
KDM5A-211ENST00000544777 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
KDM5A-211ENST00000544777 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
KDM5A-211ENST00000544777 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
KDM5A-211ENST00000544777 ZCCHC6Q5VYS8 1495 aaKnown RBP21.61■■□□□ 1.05
KDM5A-211ENST00000544777 CUX2O14529 1486 aa21.32■■□□□ 1
KDM5A-211ENST00000544777 ERCC6Q03468 1493 aa21.18■□□□□ 0.98
KDM5A-211ENST00000544777 NCAPD3P42695 1498 aa20.94■□□□□ 0.94
KDM5A-211ENST00000544777 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
KDM5A-211ENST00000544777 NESP48681 1621 aa20.82■□□□□ 0.92
KDM5A-211ENST00000544777 ATAD2BQ9ULI0 1458 aa20.78■□□□□ 0.92
KDM5A-211ENST00000544777 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
KDM5A-211ENST00000544777 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
KDM5A-211ENST00000544777 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
KDM5A-211ENST00000544777 SMARCA4P51532 1647 aa20.64■□□□□ 0.89
KDM5A-211ENST00000544777 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
KDM5A-211ENST00000544777 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
KDM5A-211ENST00000544777 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
KDM5A-211ENST00000544777 PDS5BQ9NTI5 1447 aa20.5■□□□□ 0.87
KDM5A-211ENST00000544777 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
KDM5A-211ENST00000544777 PEG3Q9GZU2 1588 aa20.41■□□□□ 0.86
KDM5A-211ENST00000544777 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
KDM5A-211ENST00000544777 WDR62O43379 1518 aa20.3■□□□□ 0.84
KDM5A-211ENST00000544777 CADPSQ9ULU8 1353 aa20.28■□□□□ 0.84
KDM5A-211ENST00000544777 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
KDM5A-211ENST00000544777 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
KDM5A-211ENST00000544777 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
KDM5A-211ENST00000544777 RIMBP3CA6NJZ7 1639 aa20.07■□□□□ 0.8
KDM5A-211ENST00000544777 RIMBP3BA6NNM3 1639 aa20.07■□□□□ 0.8
KDM5A-211ENST00000544777 RIMBP3Q9UFD9 1639 aa20.07■□□□□ 0.8
KDM5A-211ENST00000544777 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
KDM5A-211ENST00000544777 WIZO95785 1651 aa19.99■□□□□ 0.79
KDM5A-211ENST00000544777 ARHGEF11O15085 1522 aa19.92■□□□□ 0.78
KDM5A-211ENST00000544777 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
KDM5A-211ENST00000544777 CFTRP13569 1480 aa19.91■□□□□ 0.78
KDM5A-211ENST00000544777 TRHP20396 242 aaPredicted RBP19.85■□□□□ 0.77
KDM5A-211ENST00000544777 CYB5RLQ6IPT4 315 aa19.84■□□□□ 0.77
KDM5A-211ENST00000544777 ZNF608Q9ULD9 1512 aaPredicted RBP19.77■□□□□ 0.76
KDM5A-211ENST00000544777 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
KDM5A-211ENST00000544777 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
KDM5A-211ENST00000544777 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
KDM5A-211ENST00000544777 CHD1O14646 1710 aa19.68■□□□□ 0.74
KDM5A-211ENST00000544777 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
KDM5A-211ENST00000544777 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
KDM5A-211ENST00000544777 EIF4G3O43432 1585 aaKnown RBP19.65■□□□□ 0.74
KDM5A-211ENST00000544777 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
KDM5A-211ENST00000544777 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
KDM5A-211ENST00000544777 FBLN2P98095 1184 aa19.57■□□□□ 0.72
KDM5A-211ENST00000544777 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
KDM5A-211ENST00000544777 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.72
KDM5A-211ENST00000544777 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
KDM5A-211ENST00000544777 TARBP1Q13395 1621 aaKnown RBP19.48■□□□□ 0.71
KDM5A-211ENST00000544777 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
KDM5A-211ENST00000544777 CLASP1Q7Z460 1538 aa19.36■□□□□ 0.69
KDM5A-211ENST00000544777 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
KDM5A-211ENST00000544777 SYNJ1O43426 1573 aa19.34■□□□□ 0.69
KDM5A-211ENST00000544777 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
KDM5A-211ENST00000544777 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
KDM5A-211ENST00000544777 SNAPC4Q5SXM2 1469 aa19.31■□□□□ 0.68
KDM5A-211ENST00000544777 RAD54L2Q9Y4B4 1467 aa19.3■□□□□ 0.68
KDM5A-211ENST00000544777 SOGA1O94964 1423 aa19.28■□□□□ 0.68
KDM5A-211ENST00000544777 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
KDM5A-211ENST00000544777 MAGI1Q96QZ7 1491 aaPredicted RBP19.24■□□□□ 0.67
KDM5A-211ENST00000544777 GAPVD1Q14C86 1478 aa19.22■□□□□ 0.67
KDM5A-211ENST00000544777 SYNJ2O15056 1496 aa19.18■□□□□ 0.66
KDM5A-211ENST00000544777 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
KDM5A-211ENST00000544777 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
KDM5A-211ENST00000544777 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
KDM5A-211ENST00000544777 CUX1P39880 1505 aa19.04■□□□□ 0.64
KDM5A-211ENST00000544777 KIF13AQ9H1H9 1805 aa19.03■□□□□ 0.64
KDM5A-211ENST00000544777 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.64
KDM5A-211ENST00000544777 CEP170Q5SW79 1584 aa18.95■□□□□ 0.62
KDM5A-211ENST00000544777 ABCA5Q8WWZ7 1642 aa18.93■□□□□ 0.62
KDM5A-211ENST00000544777 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
KDM5A-211ENST00000544777 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
KDM5A-211ENST00000544777 ILDR1Q86SU0 546 aaPredicted RBP18.9■□□□□ 0.62
KDM5A-211ENST00000544777 SHROOM2Q13796 1616 aa18.88■□□□□ 0.61
KDM5A-211ENST00000544777 NUP160Q12769 1436 aa18.87■□□□□ 0.61
KDM5A-211ENST00000544777 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
KDM5A-211ENST00000544777 FAM69CQ0P6D2 419 aa18.83■□□□□ 0.6
KDM5A-211ENST00000544777 KDM4FA0A1W2PPD8 638 aa18.82■□□□□ 0.6
KDM5A-211ENST00000544777 ABCC10Q5T3U5 1492 aa18.79■□□□□ 0.6
KDM5A-211ENST00000544777 NPM1P06748 294 aaKnown RBP eCLIP18.78■□□□□ 0.6
KDM5A-211ENST00000544777 KDM6BO15054 1643 aa18.77■□□□□ 0.6
KDM5A-211ENST00000544777 FHAD1B1AJZ9 1412 aa18.76■□□□□ 0.59
KDM5A-211ENST00000544777 PRG4Q92954 1404 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms