RNA–Protein interactions for RNA: ENST00000544539.5

PHC1-213, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-213ENST00000544539 NISCHQ9Y2I1 1504 aa34.8■■■■□ 3.16
PHC1-213ENST00000544539 CCDC180Q9P1Z9 1646 aa31.28■■■□□ 2.6
PHC1-213ENST00000544539 ABCC9O60706 1549 aa31.26■■■□□ 2.59
PHC1-213ENST00000544539 RB1CC1Q8TDY2 1594 aa29.85■■■□□ 2.37
PHC1-213ENST00000544539 NACADO15069 1562 aa29.63■■■□□ 2.33
PHC1-213ENST00000544539 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
PHC1-213ENST00000544539 DNAJC5BQ9UF47 199 aa29.25■■■□□ 2.27
PHC1-213ENST00000544539 MYO15BQ96JP2 1530 aa29.21■■■□□ 2.27
PHC1-213ENST00000544539 PABPN1Q86U42 306 aaKnown RBP eCLIP29.1■■■□□ 2.25
PHC1-213ENST00000544539 UNC13AQ9UPW8 1703 aa28.97■■■□□ 2.23
PHC1-213ENST00000544539 DCAF1Q9Y4B6 1507 aa28.8■■■□□ 2.2
PHC1-213ENST00000544539 ZCCHC6Q5VYS8 1495 aaKnown RBP28.8■■■□□ 2.2
PHC1-213ENST00000544539 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
PHC1-213ENST00000544539 SHROOM4Q9ULL8 1493 aa28.65■■■□□ 2.18
PHC1-213ENST00000544539 SCRIBQ14160 1630 aa28.43■■■□□ 2.14
PHC1-213ENST00000544539 CC2D2AQ9P2K1 1620 aa28.24■■■□□ 2.11
PHC1-213ENST00000544539 CECR2Q9BXF3 1484 aa28.22■■■□□ 2.11
PHC1-213ENST00000544539 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
PHC1-213ENST00000544539 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
PHC1-213ENST00000544539 SMARCA2P51531 1590 aa27.2■■□□□ 1.94
PHC1-213ENST00000544539 ATAD2BQ9ULI0 1458 aa27.19■■□□□ 1.94
PHC1-213ENST00000544539 SMARCA4P51532 1647 aa27.13■■□□□ 1.93
PHC1-213ENST00000544539 ERCC6Q03468 1493 aa27.13■■□□□ 1.93
PHC1-213ENST00000544539 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
PHC1-213ENST00000544539 CUX2O14529 1486 aa27.08■■□□□ 1.93
PHC1-213ENST00000544539 DNAJC5Q9H3Z4 198 aa27.08■■□□□ 1.93
PHC1-213ENST00000544539 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
PHC1-213ENST00000544539 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
PHC1-213ENST00000544539 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
PHC1-213ENST00000544539 NESP48681 1621 aa26.78■■□□□ 1.88
PHC1-213ENST00000544539 MROH2BQ7Z745 1585 aa26.74■■□□□ 1.87
PHC1-213ENST00000544539 LAMC3Q9Y6N6 1575 aa26.74■■□□□ 1.87
PHC1-213ENST00000544539 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
PHC1-213ENST00000544539 THOC2Q8NI27 1593 aaKnown RBP26.54■■□□□ 1.84
PHC1-213ENST00000544539 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
PHC1-213ENST00000544539 KIF21AQ7Z4S6 1674 aa26.45■■□□□ 1.82
PHC1-213ENST00000544539 WIZO95785 1651 aa26.41■■□□□ 1.82
PHC1-213ENST00000544539 MRC2Q9UBG0 1479 aa26.34■■□□□ 1.81
PHC1-213ENST00000544539 CEP164Q9UPV0 1460 aa26.24■■□□□ 1.79
PHC1-213ENST00000544539 WDR62O43379 1518 aa26.24■■□□□ 1.79
PHC1-213ENST00000544539 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
PHC1-213ENST00000544539 FANCD2Q9BXW9 1451 aa26.18■■□□□ 1.78
PHC1-213ENST00000544539 TOP2AP11388 1531 aaKnown RBP26.16■■□□□ 1.78
PHC1-213ENST00000544539 CFTRP13569 1480 aa26.16■■□□□ 1.78
PHC1-213ENST00000544539 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
PHC1-213ENST00000544539 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
PHC1-213ENST00000544539 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
PHC1-213ENST00000544539 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
PHC1-213ENST00000544539 CCDC88BA6NC98 1476 aa25.83■■□□□ 1.73
PHC1-213ENST00000544539 ABCC8Q09428 1581 aa25.75■■□□□ 1.71
PHC1-213ENST00000544539 IFT140Q96RY7 1462 aa25.73■■□□□ 1.71
PHC1-213ENST00000544539 TOPBP1Q92547 1522 aa25.65■■□□□ 1.7
PHC1-213ENST00000544539 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
PHC1-213ENST00000544539 ZNF608Q9ULD9 1512 aaPredicted RBP25.56■■□□□ 1.68
PHC1-213ENST00000544539 EIF4G3O43432 1585 aaKnown RBP25.46■■□□□ 1.67
PHC1-213ENST00000544539 RIMBP3CA6NJZ7 1639 aa25.39■■□□□ 1.66
PHC1-213ENST00000544539 RIMBP3BA6NNM3 1639 aa25.39■■□□□ 1.66
PHC1-213ENST00000544539 RIMBP3Q9UFD9 1639 aa25.39■■□□□ 1.66
PHC1-213ENST00000544539 TARBP1Q13395 1621 aaKnown RBP25.38■■□□□ 1.65
PHC1-213ENST00000544539 POLA1P09884 1462 aaPredicted RBP25.38■■□□□ 1.65
PHC1-213ENST00000544539 AQRO60306 1485 aaKnown RBP eCLIP25.37■■□□□ 1.65
PHC1-213ENST00000544539 ARHGEF11O15085 1522 aa25.33■■□□□ 1.65
PHC1-213ENST00000544539 SOGA1O94964 1423 aa25.33■■□□□ 1.65
PHC1-213ENST00000544539 FBLN2P98095 1184 aa25.33■■□□□ 1.65
PHC1-213ENST00000544539 WDR97A6NE52 1622 aa25.28■■□□□ 1.64
PHC1-213ENST00000544539 CHD1O14646 1710 aa25.26■■□□□ 1.63
PHC1-213ENST00000544539 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
PHC1-213ENST00000544539 TDRD9Q8NDG6 1382 aaKnown RBP25.23■■□□□ 1.63
PHC1-213ENST00000544539 CYB5RLQ6IPT4 315 aa25.22■■□□□ 1.63
PHC1-213ENST00000544539 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
PHC1-213ENST00000544539 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
PHC1-213ENST00000544539 CUX1P39880 1505 aa25.14■■□□□ 1.62
PHC1-213ENST00000544539 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.61
PHC1-213ENST00000544539 GRIN2BQ13224 1484 aa25.13■■□□□ 1.61
PHC1-213ENST00000544539 SNAPC4Q5SXM2 1469 aa25.13■■□□□ 1.61
PHC1-213ENST00000544539 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.61
PHC1-213ENST00000544539 SYNJ1O43426 1573 aa25.08■■□□□ 1.61
PHC1-213ENST00000544539 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
PHC1-213ENST00000544539 SYNJ2O15056 1496 aa25.03■■□□□ 1.6
PHC1-213ENST00000544539 TRHP20396 242 aaPredicted RBP25.02■■□□□ 1.6
PHC1-213ENST00000544539 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
PHC1-213ENST00000544539 CLASP1Q7Z460 1538 aa24.98■■□□□ 1.59
PHC1-213ENST00000544539 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
PHC1-213ENST00000544539 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
PHC1-213ENST00000544539 WRNQ14191 1432 aaPredicted RBP eCLIP24.93■■□□□ 1.58
PHC1-213ENST00000544539 ABCA5Q8WWZ7 1642 aa24.87■■□□□ 1.57
PHC1-213ENST00000544539 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
PHC1-213ENST00000544539 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
PHC1-213ENST00000544539 BIVM-ERCC5R4GMW8 1640 aa24.76■■□□□ 1.55
PHC1-213ENST00000544539 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
PHC1-213ENST00000544539 ADAMTS12P58397 1594 aa24.7■■□□□ 1.54
PHC1-213ENST00000544539 ERICH3Q5RHP9 1530 aa24.68■■□□□ 1.54
PHC1-213ENST00000544539 NUP160Q12769 1436 aa24.67■■□□□ 1.54
PHC1-213ENST00000544539 CEP170Q5SW79 1584 aa24.6■■□□□ 1.53
PHC1-213ENST00000544539 SHROOM2Q13796 1616 aa24.53■■□□□ 1.52
PHC1-213ENST00000544539 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
PHC1-213ENST00000544539 JPH4Q96JJ6 628 aa24.48■■□□□ 1.51
PHC1-213ENST00000544539 PRG4Q92954 1404 aaPredicted RBP24.46■■□□□ 1.51
PHC1-213ENST00000544539 NPM1P06748 294 aaKnown RBP eCLIP24.4■■□□□ 1.5
PHC1-213ENST00000544539 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms