RNA–Protein interactions for RNA: ENST00000544519.1

ARHGEF17-206, Transcript of Rho guanine nucleotide exchange factor 17, humanhuman

TSL 4

Gene ARHGEF17, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF17-206ENST00000544519 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
ARHGEF17-206ENST00000544519 ABCC9O60706 1549 aa25.27■■□□□ 1.64
ARHGEF17-206ENST00000544519 CCDC180Q9P1Z9 1646 aa24.95■■□□□ 1.58
ARHGEF17-206ENST00000544519 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
ARHGEF17-206ENST00000544519 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
ARHGEF17-206ENST00000544519 DCAF8L2P0C7V8 631 aa23.73■■□□□ 1.39
ARHGEF17-206ENST00000544519 NACADO15069 1562 aa23.67■■□□□ 1.38
ARHGEF17-206ENST00000544519 PABPN1Q86U42 306 aaKnown RBP eCLIP23.53■■□□□ 1.36
ARHGEF17-206ENST00000544519 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
ARHGEF17-206ENST00000544519 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
ARHGEF17-206ENST00000544519 BICRAQ9NZM4 1560 aa23.15■■□□□ 1.3
ARHGEF17-206ENST00000544519 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
ARHGEF17-206ENST00000544519 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
ARHGEF17-206ENST00000544519 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
ARHGEF17-206ENST00000544519 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
ARHGEF17-206ENST00000544519 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
ARHGEF17-206ENST00000544519 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
ARHGEF17-206ENST00000544519 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.22
ARHGEF17-206ENST00000544519 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
ARHGEF17-206ENST00000544519 ERCC6Q03468 1493 aa21.88■■□□□ 1.09
ARHGEF17-206ENST00000544519 NCAPD3P42695 1498 aa21.83■■□□□ 1.09
ARHGEF17-206ENST00000544519 CUX2O14529 1486 aa21.83■■□□□ 1.08
ARHGEF17-206ENST00000544519 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
ARHGEF17-206ENST00000544519 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
ARHGEF17-206ENST00000544519 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
ARHGEF17-206ENST00000544519 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
ARHGEF17-206ENST00000544519 NESP48681 1621 aa21.61■■□□□ 1.05
ARHGEF17-206ENST00000544519 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
ARHGEF17-206ENST00000544519 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
ARHGEF17-206ENST00000544519 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
ARHGEF17-206ENST00000544519 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
ARHGEF17-206ENST00000544519 THOC2Q8NI27 1593 aaKnown RBP21.38■■□□□ 1.01
ARHGEF17-206ENST00000544519 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
ARHGEF17-206ENST00000544519 PDS5BQ9NTI5 1447 aa21.34■■□□□ 1.01
ARHGEF17-206ENST00000544519 KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1
ARHGEF17-206ENST00000544519 CADPSQ9ULU8 1353 aa21.2■□□□□ 0.98
ARHGEF17-206ENST00000544519 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
ARHGEF17-206ENST00000544519 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
ARHGEF17-206ENST00000544519 WIZO95785 1651 aa21.12■□□□□ 0.97
ARHGEF17-206ENST00000544519 WDR62O43379 1518 aa21.04■□□□□ 0.96
ARHGEF17-206ENST00000544519 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
ARHGEF17-206ENST00000544519 FANCD2Q9BXW9 1451 aa20.96■□□□□ 0.95
ARHGEF17-206ENST00000544519 OSCARQ8IYS5 282 aa20.9■□□□□ 0.94
ARHGEF17-206ENST00000544519 CFTRP13569 1480 aa20.87■□□□□ 0.93
ARHGEF17-206ENST00000544519 RSF1Q96T23 1441 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF17-206ENST00000544519 TOP2AP11388 1531 aaKnown RBP20.79■□□□□ 0.92
ARHGEF17-206ENST00000544519 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
ARHGEF17-206ENST00000544519 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
ARHGEF17-206ENST00000544519 CCDC88BA6NC98 1476 aa20.59■□□□□ 0.89
ARHGEF17-206ENST00000544519 IFT140Q96RY7 1462 aa20.59■□□□□ 0.89
ARHGEF17-206ENST00000544519 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.88
ARHGEF17-206ENST00000544519 RIMBP3CA6NJZ7 1639 aa20.57■□□□□ 0.88
ARHGEF17-206ENST00000544519 RIMBP3BA6NNM3 1639 aa20.57■□□□□ 0.88
ARHGEF17-206ENST00000544519 RIMBP3Q9UFD9 1639 aa20.57■□□□□ 0.88
ARHGEF17-206ENST00000544519 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
ARHGEF17-206ENST00000544519 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
ARHGEF17-206ENST00000544519 ARHGEF11O15085 1522 aa20.47■□□□□ 0.87
ARHGEF17-206ENST00000544519 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
ARHGEF17-206ENST00000544519 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
ARHGEF17-206ENST00000544519 FBLN2P98095 1184 aa20.44■□□□□ 0.86
ARHGEF17-206ENST00000544519 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
ARHGEF17-206ENST00000544519 AQRO60306 1485 aaKnown RBP eCLIP20.4■□□□□ 0.86
ARHGEF17-206ENST00000544519 CHD1O14646 1710 aa20.37■□□□□ 0.85
ARHGEF17-206ENST00000544519 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
ARHGEF17-206ENST00000544519 TARBP1Q13395 1621 aaKnown RBP20.33■□□□□ 0.84
ARHGEF17-206ENST00000544519 POLA1P09884 1462 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF17-206ENST00000544519 SOGA1O94964 1423 aa20.27■□□□□ 0.83
ARHGEF17-206ENST00000544519 RAD54L2Q9Y4B4 1467 aa20.25■□□□□ 0.83
ARHGEF17-206ENST00000544519 TDRD9Q8NDG6 1382 aaKnown RBP20.25■□□□□ 0.83
ARHGEF17-206ENST00000544519 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
ARHGEF17-206ENST00000544519 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF17-206ENST00000544519 SNAPC4Q5SXM2 1469 aa20.16■□□□□ 0.82
ARHGEF17-206ENST00000544519 FGD5Q6ZNL6 1462 aa20.15■□□□□ 0.82
ARHGEF17-206ENST00000544519 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
ARHGEF17-206ENST00000544519 WDR97A6NE52 1622 aa20.1■□□□□ 0.81
ARHGEF17-206ENST00000544519 GRIN2BQ13224 1484 aa20.08■□□□□ 0.81
ARHGEF17-206ENST00000544519 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.81
ARHGEF17-206ENST00000544519 CUX1P39880 1505 aa20.07■□□□□ 0.8
ARHGEF17-206ENST00000544519 CLASP1Q7Z460 1538 aa20.06■□□□□ 0.8
ARHGEF17-206ENST00000544519 SYNJ2O15056 1496 aa20.03■□□□□ 0.8
ARHGEF17-206ENST00000544519 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
ARHGEF17-206ENST00000544519 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
ARHGEF17-206ENST00000544519 AEBP2Q6ZN18 517 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF17-206ENST00000544519 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
ARHGEF17-206ENST00000544519 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
ARHGEF17-206ENST00000544519 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
ARHGEF17-206ENST00000544519 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
ARHGEF17-206ENST00000544519 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
ARHGEF17-206ENST00000544519 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
ARHGEF17-206ENST00000544519 ADAMTS12P58397 1594 aa19.73■□□□□ 0.75
ARHGEF17-206ENST00000544519 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
ARHGEF17-206ENST00000544519 FHAD1B1AJZ9 1412 aa19.71■□□□□ 0.75
ARHGEF17-206ENST00000544519 NUP160Q12769 1436 aa19.7■□□□□ 0.74
ARHGEF17-206ENST00000544519 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
ARHGEF17-206ENST00000544519 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
ARHGEF17-206ENST00000544519 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
ARHGEF17-206ENST00000544519 ERICH3Q5RHP9 1530 aa19.63■□□□□ 0.73
ARHGEF17-206ENST00000544519 PRG4Q92954 1404 aaPredicted RBP19.62■□□□□ 0.73
ARHGEF17-206ENST00000544519 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
ARHGEF17-206ENST00000544519 NPM1P06748 294 aaKnown RBP eCLIP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms