RNA–Protein interactions for RNA: ENST00000543979.1

AC005833.3-201, humanhuman

TSL 2

Gene AC005833.3, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005833.3-201ENST00000543979 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
AC005833.3-201ENST00000543979 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
AC005833.3-201ENST00000543979 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
AC005833.3-201ENST00000543979 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
AC005833.3-201ENST00000543979 ABCC9O60706 1549 aa21.31■■□□□ 1
AC005833.3-201ENST00000543979 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
AC005833.3-201ENST00000543979 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
AC005833.3-201ENST00000543979 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
AC005833.3-201ENST00000543979 NACADO15069 1562 aa20.2■□□□□ 0.82
AC005833.3-201ENST00000543979 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
AC005833.3-201ENST00000543979 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
AC005833.3-201ENST00000543979 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
AC005833.3-201ENST00000543979 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
AC005833.3-201ENST00000543979 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
AC005833.3-201ENST00000543979 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
AC005833.3-201ENST00000543979 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
AC005833.3-201ENST00000543979 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
AC005833.3-201ENST00000543979 FOXD1Q16676 465 aa19.58■□□□□ 0.72
AC005833.3-201ENST00000543979 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
AC005833.3-201ENST00000543979 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
AC005833.3-201ENST00000543979 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
AC005833.3-201ENST00000543979 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
AC005833.3-201ENST00000543979 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
AC005833.3-201ENST00000543979 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
AC005833.3-201ENST00000543979 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
AC005833.3-201ENST00000543979 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
AC005833.3-201ENST00000543979 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
AC005833.3-201ENST00000543979 SMARCA4P51532 1647 aa18.52■□□□□ 0.55
AC005833.3-201ENST00000543979 BAZ1AQ9NRL2 1556 aaPredicted RBP18.49■□□□□ 0.55
AC005833.3-201ENST00000543979 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
AC005833.3-201ENST00000543979 ERCC6Q03468 1493 aa18.46■□□□□ 0.55
AC005833.3-201ENST00000543979 CUX2O14529 1486 aa18.41■□□□□ 0.54
AC005833.3-201ENST00000543979 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
AC005833.3-201ENST00000543979 DNAJC5Q9H3Z4 198 aa18.38■□□□□ 0.53
AC005833.3-201ENST00000543979 MSH5O43196 834 aa18.36■□□□□ 0.53
AC005833.3-201ENST00000543979 PEG3Q9GZU2 1588 aa18.35■□□□□ 0.53
AC005833.3-201ENST00000543979 MROH2BQ7Z745 1585 aa18.29■□□□□ 0.52
AC005833.3-201ENST00000543979 NESP48681 1621 aa18.27■□□□□ 0.51
AC005833.3-201ENST00000543979 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
AC005833.3-201ENST00000543979 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
AC005833.3-201ENST00000543979 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
AC005833.3-201ENST00000543979 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
AC005833.3-201ENST00000543979 ADRA2BP18089 450 aa18.16■□□□□ 0.5
AC005833.3-201ENST00000543979 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
AC005833.3-201ENST00000543979 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
AC005833.3-201ENST00000543979 POTEDQ86YR6 584 aa18.06■□□□□ 0.48
AC005833.3-201ENST00000543979 WIZO95785 1651 aa18.04■□□□□ 0.48
AC005833.3-201ENST00000543979 KIF21AQ7Z4S6 1674 aa18■□□□□ 0.47
AC005833.3-201ENST00000543979 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
AC005833.3-201ENST00000543979 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
AC005833.3-201ENST00000543979 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
AC005833.3-201ENST00000543979 WDR62O43379 1518 aa17.88■□□□□ 0.45
AC005833.3-201ENST00000543979 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
AC005833.3-201ENST00000543979 CFTRP13569 1480 aa17.87■□□□□ 0.45
AC005833.3-201ENST00000543979 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
AC005833.3-201ENST00000543979 CCDC88BA6NC98 1476 aa17.68■□□□□ 0.42
AC005833.3-201ENST00000543979 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
AC005833.3-201ENST00000543979 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
AC005833.3-201ENST00000543979 PRDM2Q13029 1718 aa17.62■□□□□ 0.41
AC005833.3-201ENST00000543979 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
AC005833.3-201ENST00000543979 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
AC005833.3-201ENST00000543979 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
AC005833.3-201ENST00000543979 TOPBP1Q92547 1522 aa17.52■□□□□ 0.39
AC005833.3-201ENST00000543979 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
AC005833.3-201ENST00000543979 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
AC005833.3-201ENST00000543979 EIF4G3O43432 1585 aaKnown RBP17.34■□□□□ 0.37
AC005833.3-201ENST00000543979 AQRO60306 1485 aaKnown RBP eCLIP17.33■□□□□ 0.37
AC005833.3-201ENST00000543979 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
AC005833.3-201ENST00000543979 SOGA1O94964 1423 aa17.31■□□□□ 0.36
AC005833.3-201ENST00000543979 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
AC005833.3-201ENST00000543979 FBLN2P98095 1184 aa17.3■□□□□ 0.36
AC005833.3-201ENST00000543979 RIMBP3CA6NJZ7 1639 aa17.26■□□□□ 0.35
AC005833.3-201ENST00000543979 RIMBP3BA6NNM3 1639 aa17.26■□□□□ 0.35
AC005833.3-201ENST00000543979 RIMBP3Q9UFD9 1639 aa17.26■□□□□ 0.35
AC005833.3-201ENST00000543979 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
AC005833.3-201ENST00000543979 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
AC005833.3-201ENST00000543979 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
AC005833.3-201ENST00000543979 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
AC005833.3-201ENST00000543979 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
AC005833.3-201ENST00000543979 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
AC005833.3-201ENST00000543979 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
AC005833.3-201ENST00000543979 CHMP7Q8WUX9 453 aaPredicted RBP17.19■□□□□ 0.34
AC005833.3-201ENST00000543979 CHD1O14646 1710 aa17.18■□□□□ 0.34
AC005833.3-201ENST00000543979 CUX1P39880 1505 aa17.18■□□□□ 0.34
AC005833.3-201ENST00000543979 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
AC005833.3-201ENST00000543979 SNAPC4Q5SXM2 1469 aa17.15■□□□□ 0.34
AC005833.3-201ENST00000543979 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
AC005833.3-201ENST00000543979 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
AC005833.3-201ENST00000543979 SYNJ2O15056 1496 aa17.08■□□□□ 0.32
AC005833.3-201ENST00000543979 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
AC005833.3-201ENST00000543979 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
AC005833.3-201ENST00000543979 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
AC005833.3-201ENST00000543979 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
AC005833.3-201ENST00000543979 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
AC005833.3-201ENST00000543979 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.32
AC005833.3-201ENST00000543979 PBRM1Q86U86 1689 aa16.98■□□□□ 0.31
AC005833.3-201ENST00000543979 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
AC005833.3-201ENST00000543979 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
AC005833.3-201ENST00000543979 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
AC005833.3-201ENST00000543979 GRIN2AQ12879 1464 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms