RNA–Protein interactions for RNA: ENST00000543907.1

AP003721.1-201, humanhuman

TSL 3 BASIC

Gene AP003721.1, Length 864 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003721.1-201ENST00000543907 NISCHQ9Y2I1 1504 aa18.79■□□□□ 0.6
AP003721.1-201ENST00000543907 ABCC9O60706 1549 aa17.09■□□□□ 0.33
AP003721.1-201ENST00000543907 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
AP003721.1-201ENST00000543907 RB1CC1Q8TDY2 1594 aa16.15■□□□□ 0.18
AP003721.1-201ENST00000543907 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
AP003721.1-201ENST00000543907 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
AP003721.1-201ENST00000543907 NACADO15069 1562 aa16■□□□□ 0.15
AP003721.1-201ENST00000543907 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
AP003721.1-201ENST00000543907 UNC13AQ9UPW8 1703 aa15.76■□□□□ 0.11
AP003721.1-201ENST00000543907 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
AP003721.1-201ENST00000543907 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
AP003721.1-201ENST00000543907 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
AP003721.1-201ENST00000543907 DCAF1Q9Y4B6 1507 aa15.47■□□□□ 0.07
AP003721.1-201ENST00000543907 SCRIBQ14160 1630 aa15.45■□□□□ 0.06
AP003721.1-201ENST00000543907 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
AP003721.1-201ENST00000543907 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
AP003721.1-201ENST00000543907 CECR2Q9BXF3 1484 aa15.38■□□□□ 0.05
AP003721.1-201ENST00000543907 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
AP003721.1-201ENST00000543907 DNAJC5Q9H3Z4 198 aa14.87□□□□□ -0.03
AP003721.1-201ENST00000543907 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
AP003721.1-201ENST00000543907 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
AP003721.1-201ENST00000543907 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
AP003721.1-201ENST00000543907 CUX2O14529 1486 aa14.7□□□□□ -0.06
AP003721.1-201ENST00000543907 SMARCA4P51532 1647 aa14.68□□□□□ -0.06
AP003721.1-201ENST00000543907 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
AP003721.1-201ENST00000543907 NESP48681 1621 aa14.63□□□□□ -0.07
AP003721.1-201ENST00000543907 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
AP003721.1-201ENST00000543907 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
AP003721.1-201ENST00000543907 BAZ1AQ9NRL2 1556 aaPredicted RBP14.59□□□□□ -0.07
AP003721.1-201ENST00000543907 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
AP003721.1-201ENST00000543907 PEG3Q9GZU2 1588 aa14.49□□□□□ -0.09
AP003721.1-201ENST00000543907 THOC2Q8NI27 1593 aaKnown RBP14.45□□□□□ -0.1
AP003721.1-201ENST00000543907 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
AP003721.1-201ENST00000543907 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
AP003721.1-201ENST00000543907 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
AP003721.1-201ENST00000543907 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
AP003721.1-201ENST00000543907 WIZO95785 1651 aa14.33□□□□□ -0.12
AP003721.1-201ENST00000543907 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
AP003721.1-201ENST00000543907 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
AP003721.1-201ENST00000543907 WDR62O43379 1518 aa14.23□□□□□ -0.13
AP003721.1-201ENST00000543907 CEP164Q9UPV0 1460 aa14.21□□□□□ -0.13
AP003721.1-201ENST00000543907 FANCD2Q9BXW9 1451 aa14.19□□□□□ -0.14
AP003721.1-201ENST00000543907 RSF1Q96T23 1441 aaPredicted RBP14.16□□□□□ -0.14
AP003721.1-201ENST00000543907 CFTRP13569 1480 aa14.15□□□□□ -0.14
AP003721.1-201ENST00000543907 TOP2AP11388 1531 aaKnown RBP14.11□□□□□ -0.15
AP003721.1-201ENST00000543907 OSCARQ8IYS5 282 aa14.08□□□□□ -0.16
AP003721.1-201ENST00000543907 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
AP003721.1-201ENST00000543907 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
AP003721.1-201ENST00000543907 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
AP003721.1-201ENST00000543907 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
AP003721.1-201ENST00000543907 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
AP003721.1-201ENST00000543907 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
AP003721.1-201ENST00000543907 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
AP003721.1-201ENST00000543907 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
AP003721.1-201ENST00000543907 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
AP003721.1-201ENST00000543907 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
AP003721.1-201ENST00000543907 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.2
AP003721.1-201ENST00000543907 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
AP003721.1-201ENST00000543907 AQRO60306 1485 aaKnown RBP eCLIP13.82□□□□□ -0.2
AP003721.1-201ENST00000543907 FBLN2P98095 1184 aa13.82□□□□□ -0.2
AP003721.1-201ENST00000543907 ARHGEF11O15085 1522 aa13.81□□□□□ -0.2
AP003721.1-201ENST00000543907 CYB5RLQ6IPT4 315 aa13.8□□□□□ -0.2
AP003721.1-201ENST00000543907 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
AP003721.1-201ENST00000543907 POLA1P09884 1462 aaPredicted RBP13.75□□□□□ -0.21
AP003721.1-201ENST00000543907 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
AP003721.1-201ENST00000543907 CHD1O14646 1710 aa13.74□□□□□ -0.21
AP003721.1-201ENST00000543907 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
AP003721.1-201ENST00000543907 SOGA1O94964 1423 aa13.73□□□□□ -0.21
AP003721.1-201ENST00000543907 TRHP20396 242 aaPredicted RBP13.7□□□□□ -0.22
AP003721.1-201ENST00000543907 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
AP003721.1-201ENST00000543907 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
AP003721.1-201ENST00000543907 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
AP003721.1-201ENST00000543907 SNAPC4Q5SXM2 1469 aa13.66□□□□□ -0.22
AP003721.1-201ENST00000543907 CUX1P39880 1505 aa13.63□□□□□ -0.23
AP003721.1-201ENST00000543907 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
AP003721.1-201ENST00000543907 MAGI1Q96QZ7 1491 aaPredicted RBP13.58□□□□□ -0.24
AP003721.1-201ENST00000543907 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
AP003721.1-201ENST00000543907 SUPT5HO00267 1087 aaKnown RBP13.57□□□□□ -0.24
AP003721.1-201ENST00000543907 CLASP1Q7Z460 1538 aa13.57□□□□□ -0.24
AP003721.1-201ENST00000543907 SYNJ1O43426 1573 aa13.57□□□□□ -0.24
AP003721.1-201ENST00000543907 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
AP003721.1-201ENST00000543907 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
AP003721.1-201ENST00000543907 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
AP003721.1-201ENST00000543907 ABCA10Q8WWZ4 1543 aa13.48□□□□□ -0.25
AP003721.1-201ENST00000543907 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.26
AP003721.1-201ENST00000543907 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
AP003721.1-201ENST00000543907 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
AP003721.1-201ENST00000543907 ERCC6L2Q5T890 1561 aa13.4□□□□□ -0.26
AP003721.1-201ENST00000543907 AEBP2Q6ZN18 517 aaPredicted RBP13.38□□□□□ -0.27
AP003721.1-201ENST00000543907 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
AP003721.1-201ENST00000543907 CEP170Q5SW79 1584 aa13.37□□□□□ -0.27
AP003721.1-201ENST00000543907 TOP2BQ02880 1626 aa13.35□□□□□ -0.27
AP003721.1-201ENST00000543907 FHAD1B1AJZ9 1412 aa13.35□□□□□ -0.27
AP003721.1-201ENST00000543907 NUP160Q12769 1436 aa13.35□□□□□ -0.27
AP003721.1-201ENST00000543907 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
AP003721.1-201ENST00000543907 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
AP003721.1-201ENST00000543907 PRG4Q92954 1404 aaPredicted RBP13.29□□□□□ -0.28
AP003721.1-201ENST00000543907 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
AP003721.1-201ENST00000543907 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
AP003721.1-201ENST00000543907 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms