RNA–Protein interactions for RNA: ENST00000543594.5

TMEM138-210, Transcript of transmembrane protein 138, humanhuman

TSL 1 (best)

Gene TMEM138, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM138-210ENST00000543594 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
TMEM138-210ENST00000543594 CCDC180Q9P1Z9 1646 aa32.21■■■□□ 2.75
TMEM138-210ENST00000543594 ABCC9O60706 1549 aa31.37■■■□□ 2.61
TMEM138-210ENST00000543594 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
TMEM138-210ENST00000543594 NACADO15069 1562 aa30.23■■■□□ 2.43
TMEM138-210ENST00000543594 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
TMEM138-210ENST00000543594 MYO15BQ96JP2 1530 aa30.09■■■□□ 2.41
TMEM138-210ENST00000543594 DCAF8L2P0C7V8 631 aa30.07■■■□□ 2.4
TMEM138-210ENST00000543594 DCAF1Q9Y4B6 1507 aa29.97■■■□□ 2.39
TMEM138-210ENST00000543594 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
TMEM138-210ENST00000543594 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
TMEM138-210ENST00000543594 SCRIBQ14160 1630 aa29.32■■■□□ 2.28
TMEM138-210ENST00000543594 PABPN1Q86U42 306 aaKnown RBP eCLIP29.28■■■□□ 2.28
TMEM138-210ENST00000543594 SHROOM4Q9ULL8 1493 aa29.05■■■□□ 2.24
TMEM138-210ENST00000543594 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
TMEM138-210ENST00000543594 EIF4G1Q04637 1599 aaKnown RBP28.56■■■□□ 2.16
TMEM138-210ENST00000543594 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
TMEM138-210ENST00000543594 CECR2Q9BXF3 1484 aa28.19■■■□□ 2.1
TMEM138-210ENST00000543594 SMARCA4P51532 1647 aa28.09■■■□□ 2.09
TMEM138-210ENST00000543594 BAZ1AQ9NRL2 1556 aaPredicted RBP28.04■■■□□ 2.08
TMEM138-210ENST00000543594 ATAD2BQ9ULI0 1458 aa27.89■■■□□ 2.06
TMEM138-210ENST00000543594 MROH2BQ7Z745 1585 aa27.89■■■□□ 2.05
TMEM138-210ENST00000543594 NCAPD3P42695 1498 aa27.88■■■□□ 2.05
TMEM138-210ENST00000543594 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
TMEM138-210ENST00000543594 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
TMEM138-210ENST00000543594 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
TMEM138-210ENST00000543594 BAZ1BQ9UIG0 1483 aaKnown RBP27.64■■■□□ 2.02
TMEM138-210ENST00000543594 WIZO95785 1651 aa27.61■■■□□ 2.01
TMEM138-210ENST00000543594 RSF1Q96T23 1441 aaPredicted RBP27.56■■■□□ 2
TMEM138-210ENST00000543594 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
TMEM138-210ENST00000543594 NESP48681 1621 aa27.19■■□□□ 1.94
TMEM138-210ENST00000543594 LAMC3Q9Y6N6 1575 aa27.16■■□□□ 1.94
TMEM138-210ENST00000543594 CADPSQ9ULU8 1353 aa27.04■■□□□ 1.92
TMEM138-210ENST00000543594 ERCC6Q03468 1493 aa27.01■■□□□ 1.91
TMEM138-210ENST00000543594 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
TMEM138-210ENST00000543594 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
TMEM138-210ENST00000543594 CFTRP13569 1480 aa26.92■■□□□ 1.9
TMEM138-210ENST00000543594 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
TMEM138-210ENST00000543594 THOC2Q8NI27 1593 aaKnown RBP26.82■■□□□ 1.88
TMEM138-210ENST00000543594 PRDM2Q13029 1718 aa26.82■■□□□ 1.88
TMEM138-210ENST00000543594 SUPT5HO00267 1087 aaKnown RBP26.8■■□□□ 1.88
TMEM138-210ENST00000543594 CUX2O14529 1486 aa26.77■■□□□ 1.88
TMEM138-210ENST00000543594 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
TMEM138-210ENST00000543594 CEP164Q9UPV0 1460 aa26.7■■□□□ 1.87
TMEM138-210ENST00000543594 MRC2Q9UBG0 1479 aa26.66■■□□□ 1.86
TMEM138-210ENST00000543594 WDR62O43379 1518 aa26.6■■□□□ 1.85
TMEM138-210ENST00000543594 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
TMEM138-210ENST00000543594 TOPBP1Q92547 1522 aa26.33■■□□□ 1.81
TMEM138-210ENST00000543594 ABCC8Q09428 1581 aa26.33■■□□□ 1.8
TMEM138-210ENST00000543594 DNMBPQ6XZF7 1577 aa26.32■■□□□ 1.8
TMEM138-210ENST00000543594 CUX1P39880 1505 aa26.16■■□□□ 1.78
TMEM138-210ENST00000543594 IFT140Q96RY7 1462 aa26.15■■□□□ 1.78
TMEM138-210ENST00000543594 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
TMEM138-210ENST00000543594 TARBP1Q13395 1621 aaKnown RBP26.08■■□□□ 1.77
TMEM138-210ENST00000543594 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
TMEM138-210ENST00000543594 ZNF608Q9ULD9 1512 aaPredicted RBP26.03■■□□□ 1.76
TMEM138-210ENST00000543594 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
TMEM138-210ENST00000543594 RAD54L2Q9Y4B4 1467 aa25.98■■□□□ 1.75
TMEM138-210ENST00000543594 SOGA1O94964 1423 aa25.97■■□□□ 1.75
TMEM138-210ENST00000543594 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
TMEM138-210ENST00000543594 TOP2BQ02880 1626 aa25.96■■□□□ 1.75
TMEM138-210ENST00000543594 SYNJ1O43426 1573 aa25.95■■□□□ 1.75
TMEM138-210ENST00000543594 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.75
TMEM138-210ENST00000543594 WDR97A6NE52 1622 aa25.91■■□□□ 1.74
TMEM138-210ENST00000543594 DNAJC5Q9H3Z4 198 aa25.87■■□□□ 1.73
TMEM138-210ENST00000543594 AQRO60306 1485 aaKnown RBP eCLIP25.86■■□□□ 1.73
TMEM138-210ENST00000543594 ABCA10Q8WWZ4 1543 aa25.81■■□□□ 1.72
TMEM138-210ENST00000543594 TDRD9Q8NDG6 1382 aaKnown RBP25.81■■□□□ 1.72
TMEM138-210ENST00000543594 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
TMEM138-210ENST00000543594 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
TMEM138-210ENST00000543594 GRIN2BQ13224 1484 aa25.68■■□□□ 1.7
TMEM138-210ENST00000543594 GAPVD1Q14C86 1478 aa25.68■■□□□ 1.7
TMEM138-210ENST00000543594 CHD1O14646 1710 aa25.65■■□□□ 1.7
TMEM138-210ENST00000543594 SNAPC4Q5SXM2 1469 aa25.64■■□□□ 1.69
TMEM138-210ENST00000543594 MAGI1Q96QZ7 1491 aaPredicted RBP25.62■■□□□ 1.69
TMEM138-210ENST00000543594 OSCARQ8IYS5 282 aa25.61■■□□□ 1.69
TMEM138-210ENST00000543594 SYNJ2O15056 1496 aa25.51■■□□□ 1.67
TMEM138-210ENST00000543594 ERICH3Q5RHP9 1530 aa25.51■■□□□ 1.67
TMEM138-210ENST00000543594 FBLN2P98095 1184 aa25.47■■□□□ 1.67
TMEM138-210ENST00000543594 ADAMTS12P58397 1594 aa25.47■■□□□ 1.67
TMEM138-210ENST00000543594 CHMP7Q8WUX9 453 aaPredicted RBP25.44■■□□□ 1.66
TMEM138-210ENST00000543594 KIF27Q86VH2 1401 aa25.41■■□□□ 1.66
TMEM138-210ENST00000543594 FHAD1B1AJZ9 1412 aa25.39■■□□□ 1.66
TMEM138-210ENST00000543594 CLASP1Q7Z460 1538 aa25.36■■□□□ 1.65
TMEM138-210ENST00000543594 GRIN2AQ12879 1464 aa25.35■■□□□ 1.65
TMEM138-210ENST00000543594 IGF1RP08069 1367 aa25.32■■□□□ 1.64
TMEM138-210ENST00000543594 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
TMEM138-210ENST00000543594 CUL7Q14999 1698 aa25.3■■□□□ 1.64
TMEM138-210ENST00000543594 RIMBP3CA6NJZ7 1639 aa25.28■■□□□ 1.64
TMEM138-210ENST00000543594 RIMBP3BA6NNM3 1639 aa25.28■■□□□ 1.64
TMEM138-210ENST00000543594 RIMBP3Q9UFD9 1639 aa25.28■■□□□ 1.64
TMEM138-210ENST00000543594 NUP160Q12769 1436 aa25.26■■□□□ 1.63
TMEM138-210ENST00000543594 CEP170Q5SW79 1584 aa25.26■■□□□ 1.63
TMEM138-210ENST00000543594 ARHGEF11O15085 1522 aa25.25■■□□□ 1.63
TMEM138-210ENST00000543594 RUSC2Q8N2Y8 1516 aa25.23■■□□□ 1.63
TMEM138-210ENST00000543594 CARMIL1Q5VZK9 1371 aa25.16■■□□□ 1.62
TMEM138-210ENST00000543594 SHROOM2Q13796 1616 aa25.11■■□□□ 1.61
TMEM138-210ENST00000543594 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
TMEM138-210ENST00000543594 ARAP1Q96P48 1450 aa25.05■■□□□ 1.6
TMEM138-210ENST00000543594 RAPGEF2Q9Y4G8 1499 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms