RNA–Protein interactions for RNA: ENST00000543049.1

NLRC5-222, Transcript of NLR family CARD domain containing 5, humanhuman

TSL 2

Gene NLRC5, Length 484 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC5-222ENST00000543049 NISCHQ9Y2I1 1504 aa26.92■■□□□ 1.9
NLRC5-222ENST00000543049 ABCC9O60706 1549 aa25.55■■□□□ 1.68
NLRC5-222ENST00000543049 DNAJC5BQ9UF47 199 aa24.89■■□□□ 1.58
NLRC5-222ENST00000543049 CCDC180Q9P1Z9 1646 aa24.48■■□□□ 1.51
NLRC5-222ENST00000543049 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
NLRC5-222ENST00000543049 PABPN1Q86U42 306 aaKnown RBP eCLIP23.72■■□□□ 1.39
NLRC5-222ENST00000543049 DNAJC5Q9H3Z4 198 aa23.5■■□□□ 1.35
NLRC5-222ENST00000543049 NACADO15069 1562 aa23.42■■□□□ 1.34
NLRC5-222ENST00000543049 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.33
NLRC5-222ENST00000543049 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
NLRC5-222ENST00000543049 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
NLRC5-222ENST00000543049 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
NLRC5-222ENST00000543049 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
NLRC5-222ENST00000543049 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
NLRC5-222ENST00000543049 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
NLRC5-222ENST00000543049 SHROOM4Q9ULL8 1493 aa22.67■■□□□ 1.22
NLRC5-222ENST00000543049 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
NLRC5-222ENST00000543049 CUX2O14529 1486 aa22.33■■□□□ 1.16
NLRC5-222ENST00000543049 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
NLRC5-222ENST00000543049 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
NLRC5-222ENST00000543049 ERCC6Q03468 1493 aa22.11■■□□□ 1.13
NLRC5-222ENST00000543049 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
NLRC5-222ENST00000543049 NESP48681 1621 aa21.68■■□□□ 1.06
NLRC5-222ENST00000543049 NCAPD3P42695 1498 aa21.67■■□□□ 1.06
NLRC5-222ENST00000543049 THOC2Q8NI27 1593 aaKnown RBP21.56■■□□□ 1.04
NLRC5-222ENST00000543049 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
NLRC5-222ENST00000543049 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
NLRC5-222ENST00000543049 HMGXB3Q12766 1538 aa21.36■■□□□ 1.01
NLRC5-222ENST00000543049 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
NLRC5-222ENST00000543049 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
NLRC5-222ENST00000543049 OSCARQ8IYS5 282 aa21.27■■□□□ 1
NLRC5-222ENST00000543049 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
NLRC5-222ENST00000543049 BAZ1BQ9UIG0 1483 aaKnown RBP21.21■□□□□ 0.99
NLRC5-222ENST00000543049 BAZ1AQ9NRL2 1556 aaPredicted RBP21.21■□□□□ 0.99
NLRC5-222ENST00000543049 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
NLRC5-222ENST00000543049 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
NLRC5-222ENST00000543049 WDR62O43379 1518 aa21.06■□□□□ 0.96
NLRC5-222ENST00000543049 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
NLRC5-222ENST00000543049 RIMBP3CA6NJZ7 1639 aa21.01■□□□□ 0.95
NLRC5-222ENST00000543049 RIMBP3BA6NNM3 1639 aa21.01■□□□□ 0.95
NLRC5-222ENST00000543049 RIMBP3Q9UFD9 1639 aa21.01■□□□□ 0.95
NLRC5-222ENST00000543049 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
NLRC5-222ENST00000543049 TRHP20396 242 aaPredicted RBP20.96■□□□□ 0.95
NLRC5-222ENST00000543049 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
NLRC5-222ENST00000543049 CYB5RLQ6IPT4 315 aa20.87■□□□□ 0.93
NLRC5-222ENST00000543049 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
NLRC5-222ENST00000543049 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
NLRC5-222ENST00000543049 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
NLRC5-222ENST00000543049 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
NLRC5-222ENST00000543049 URB2Q14146 1524 aaKnown RBP20.63■□□□□ 0.89
NLRC5-222ENST00000543049 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
NLRC5-222ENST00000543049 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
NLRC5-222ENST00000543049 CFTRP13569 1480 aa20.52■□□□□ 0.88
NLRC5-222ENST00000543049 WIZO95785 1651 aa20.46■□□□□ 0.87
NLRC5-222ENST00000543049 IFT140Q96RY7 1462 aa20.45■□□□□ 0.86
NLRC5-222ENST00000543049 FBLN2P98095 1184 aa20.41■□□□□ 0.86
NLRC5-222ENST00000543049 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
NLRC5-222ENST00000543049 CHD1O14646 1710 aa20.36■□□□□ 0.85
NLRC5-222ENST00000543049 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.84
NLRC5-222ENST00000543049 ILDR1Q86SU0 546 aaPredicted RBP20.28■□□□□ 0.84
NLRC5-222ENST00000543049 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.84
NLRC5-222ENST00000543049 TOPBP1Q92547 1522 aa20.23■□□□□ 0.83
NLRC5-222ENST00000543049 PRDM2Q13029 1718 aa20.14■□□□□ 0.81
NLRC5-222ENST00000543049 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
NLRC5-222ENST00000543049 TARBP1Q13395 1621 aaKnown RBP20.1■□□□□ 0.81
NLRC5-222ENST00000543049 CLASP1Q7Z460 1538 aa20.1■□□□□ 0.81
NLRC5-222ENST00000543049 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
NLRC5-222ENST00000543049 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
NLRC5-222ENST00000543049 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
NLRC5-222ENST00000543049 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
NLRC5-222ENST00000543049 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.8
NLRC5-222ENST00000543049 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
NLRC5-222ENST00000543049 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
NLRC5-222ENST00000543049 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
NLRC5-222ENST00000543049 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
NLRC5-222ENST00000543049 CCDC88BA6NC98 1476 aa19.94■□□□□ 0.78
NLRC5-222ENST00000543049 SOGA1O94964 1423 aa19.91■□□□□ 0.78
NLRC5-222ENST00000543049 KDM4FA0A1W2PPD8 638 aa19.89■□□□□ 0.77
NLRC5-222ENST00000543049 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
NLRC5-222ENST00000543049 SYNJ2O15056 1496 aa19.84■□□□□ 0.77
NLRC5-222ENST00000543049 GRIN2BQ13224 1484 aa19.8■□□□□ 0.76
NLRC5-222ENST00000543049 ERCC6L2Q5T890 1561 aa19.78■□□□□ 0.76
NLRC5-222ENST00000543049 KIF13AQ9H1H9 1805 aa19.77■□□□□ 0.76
NLRC5-222ENST00000543049 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
NLRC5-222ENST00000543049 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
NLRC5-222ENST00000543049 FAM69CQ0P6D2 419 aa19.7■□□□□ 0.74
NLRC5-222ENST00000543049 CEP170Q5SW79 1584 aa19.62■□□□□ 0.73
NLRC5-222ENST00000543049 PBRM1Q86U86 1689 aa19.61■□□□□ 0.73
NLRC5-222ENST00000543049 ABCC10Q5T3U5 1492 aa19.58■□□□□ 0.72
NLRC5-222ENST00000543049 KDM6BO15054 1643 aa19.57■□□□□ 0.72
NLRC5-222ENST00000543049 CUX1P39880 1505 aa19.55■□□□□ 0.72
NLRC5-222ENST00000543049 NPM1P06748 294 aaKnown RBP eCLIP19.54■□□□□ 0.72
NLRC5-222ENST00000543049 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
NLRC5-222ENST00000543049 NUP160Q12769 1436 aa19.5■□□□□ 0.71
NLRC5-222ENST00000543049 SHROOM2Q13796 1616 aa19.48■□□□□ 0.71
NLRC5-222ENST00000543049 DIP2BQ9P265 1576 aa19.46■□□□□ 0.71
NLRC5-222ENST00000543049 HECW2Q9P2P5 1572 aa19.46■□□□□ 0.71
NLRC5-222ENST00000543049 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
NLRC5-222ENST00000543049 FBXO41Q8TF61 875 aa19.45■□□□□ 0.7
NLRC5-222ENST00000543049 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms