RNA–Protein interactions for RNA: ENST00000542479.1

AP000943.2-204, humanhuman

TSL 4

Gene AP000943.2, Length 532 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000943.2-204ENST00000542479 NISCHQ9Y2I1 1504 aa34.82■■■■□ 3.16
AP000943.2-204ENST00000542479 AEBP2Q6ZN18 517 aaPredicted RBP31.13■■■□□ 2.57
AP000943.2-204ENST00000542479 CCDC180Q9P1Z9 1646 aa30.99■■■□□ 2.55
AP000943.2-204ENST00000542479 ABCC9O60706 1549 aa30.64■■■□□ 2.5
AP000943.2-204ENST00000542479 CHIC1Q5VXU3 224 aa29.74■■■□□ 2.35
AP000943.2-204ENST00000542479 RB1CC1Q8TDY2 1594 aa29.27■■■□□ 2.28
AP000943.2-204ENST00000542479 DCAF8L2P0C7V8 631 aa29.24■■■□□ 2.27
AP000943.2-204ENST00000542479 NACADO15069 1562 aa29.18■■■□□ 2.26
AP000943.2-204ENST00000542479 ZCCHC6Q5VYS8 1495 aaKnown RBP28.95■■■□□ 2.22
AP000943.2-204ENST00000542479 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.21
AP000943.2-204ENST00000542479 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
AP000943.2-204ENST00000542479 DCAF1Q9Y4B6 1507 aa28.72■■■□□ 2.19
AP000943.2-204ENST00000542479 PABPN1Q86U42 306 aaKnown RBP eCLIP28.64■■■□□ 2.18
AP000943.2-204ENST00000542479 BICRAQ9NZM4 1560 aa28.52■■■□□ 2.16
AP000943.2-204ENST00000542479 DNAJC5BQ9UF47 199 aa28.43■■■□□ 2.14
AP000943.2-204ENST00000542479 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
AP000943.2-204ENST00000542479 SHROOM4Q9ULL8 1493 aa27.96■■■□□ 2.07
AP000943.2-204ENST00000542479 EIF4G1Q04637 1599 aaKnown RBP27.72■■■□□ 2.03
AP000943.2-204ENST00000542479 CC2D2AQ9P2K1 1620 aa27.69■■■□□ 2.02
AP000943.2-204ENST00000542479 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
AP000943.2-204ENST00000542479 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
AP000943.2-204ENST00000542479 ATAD2BQ9ULI0 1458 aa26.98■■□□□ 1.91
AP000943.2-204ENST00000542479 NCAPD3P42695 1498 aa26.95■■□□□ 1.91
AP000943.2-204ENST00000542479 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.9
AP000943.2-204ENST00000542479 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
AP000943.2-204ENST00000542479 SMARCA2P51531 1590 aa26.86■■□□□ 1.89
AP000943.2-204ENST00000542479 HMGXB3Q12766 1538 aa26.77■■□□□ 1.88
AP000943.2-204ENST00000542479 PEG3Q9GZU2 1588 aa26.76■■□□□ 1.87
AP000943.2-204ENST00000542479 BAZ1BQ9UIG0 1483 aaKnown RBP26.7■■□□□ 1.87
AP000943.2-204ENST00000542479 WIZO95785 1651 aa26.62■■□□□ 1.85
AP000943.2-204ENST00000542479 NESP48681 1621 aa26.5■■□□□ 1.83
AP000943.2-204ENST00000542479 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
AP000943.2-204ENST00000542479 SENP3Q9H4L4 574 aaPredicted RBP26.4■■□□□ 1.82
AP000943.2-204ENST00000542479 ERCC6Q03468 1493 aa26.34■■□□□ 1.81
AP000943.2-204ENST00000542479 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
AP000943.2-204ENST00000542479 TOP2AP11388 1531 aaKnown RBP26.22■■□□□ 1.79
AP000943.2-204ENST00000542479 PHF23Q9BUL5 403 aaPredicted RBP26.18■■□□□ 1.78
AP000943.2-204ENST00000542479 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
AP000943.2-204ENST00000542479 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
AP000943.2-204ENST00000542479 CUX2O14529 1486 aa26.1■■□□□ 1.77
AP000943.2-204ENST00000542479 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
AP000943.2-204ENST00000542479 PDS5BQ9NTI5 1447 aa26.07■■□□□ 1.76
AP000943.2-204ENST00000542479 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
AP000943.2-204ENST00000542479 CFTRP13569 1480 aa25.97■■□□□ 1.75
AP000943.2-204ENST00000542479 FANCD2Q9BXW9 1451 aa25.88■■□□□ 1.73
AP000943.2-204ENST00000542479 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
AP000943.2-204ENST00000542479 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
AP000943.2-204ENST00000542479 WDR62O43379 1518 aa25.78■■□□□ 1.72
AP000943.2-204ENST00000542479 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
AP000943.2-204ENST00000542479 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
AP000943.2-204ENST00000542479 URB2Q14146 1524 aaKnown RBP25.69■■□□□ 1.7
AP000943.2-204ENST00000542479 DNAJC5Q9H3Z4 198 aa25.64■■□□□ 1.7
AP000943.2-204ENST00000542479 TOPBP1Q92547 1522 aa25.46■■□□□ 1.67
AP000943.2-204ENST00000542479 DNMBPQ6XZF7 1577 aa25.38■■□□□ 1.65
AP000943.2-204ENST00000542479 ABCC8Q09428 1581 aa25.33■■□□□ 1.65
AP000943.2-204ENST00000542479 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
AP000943.2-204ENST00000542479 IFT140Q96RY7 1462 aa25.29■■□□□ 1.64
AP000943.2-204ENST00000542479 CUX1P39880 1505 aa25.23■■□□□ 1.63
AP000943.2-204ENST00000542479 POLA1P09884 1462 aaPredicted RBP25.23■■□□□ 1.63
AP000943.2-204ENST00000542479 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
AP000943.2-204ENST00000542479 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
AP000943.2-204ENST00000542479 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
AP000943.2-204ENST00000542479 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
AP000943.2-204ENST00000542479 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.61
AP000943.2-204ENST00000542479 SOGA1O94964 1423 aa25.12■■□□□ 1.61
AP000943.2-204ENST00000542479 TDRD9Q8NDG6 1382 aaKnown RBP25.05■■□□□ 1.6
AP000943.2-204ENST00000542479 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
AP000943.2-204ENST00000542479 WDR97A6NE52 1622 aa24.96■■□□□ 1.59
AP000943.2-204ENST00000542479 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
AP000943.2-204ENST00000542479 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
AP000943.2-204ENST00000542479 CHD1O14646 1710 aa24.92■■□□□ 1.58
AP000943.2-204ENST00000542479 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
AP000943.2-204ENST00000542479 TOP2BQ02880 1626 aa24.9■■□□□ 1.58
AP000943.2-204ENST00000542479 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
AP000943.2-204ENST00000542479 FBLN2P98095 1184 aa24.85■■□□□ 1.57
AP000943.2-204ENST00000542479 ABCA10Q8WWZ4 1543 aa24.85■■□□□ 1.57
AP000943.2-204ENST00000542479 GRIN2BQ13224 1484 aa24.81■■□□□ 1.56
AP000943.2-204ENST00000542479 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
AP000943.2-204ENST00000542479 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
AP000943.2-204ENST00000542479 ABCA5Q8WWZ7 1642 aa24.8■■□□□ 1.56
AP000943.2-204ENST00000542479 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
AP000943.2-204ENST00000542479 MAGI1Q96QZ7 1491 aaPredicted RBP24.74■■□□□ 1.55
AP000943.2-204ENST00000542479 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
AP000943.2-204ENST00000542479 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
AP000943.2-204ENST00000542479 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
AP000943.2-204ENST00000542479 CHMP7Q8WUX9 453 aaPredicted RBP24.7■■□□□ 1.54
AP000943.2-204ENST00000542479 SYNJ2O15056 1496 aa24.67■■□□□ 1.54
AP000943.2-204ENST00000542479 FOXD1Q16676 465 aa24.67■■□□□ 1.54
AP000943.2-204ENST00000542479 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
AP000943.2-204ENST00000542479 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
AP000943.2-204ENST00000542479 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
AP000943.2-204ENST00000542479 ERICH3Q5RHP9 1530 aa24.53■■□□□ 1.52
AP000943.2-204ENST00000542479 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
AP000943.2-204ENST00000542479 FHAD1B1AJZ9 1412 aa24.49■■□□□ 1.51
AP000943.2-204ENST00000542479 ARAP1Q96P48 1450 aa24.47■■□□□ 1.51
AP000943.2-204ENST00000542479 CYB5RLQ6IPT4 315 aa24.47■■□□□ 1.51
AP000943.2-204ENST00000542479 CEP170Q5SW79 1584 aa24.45■■□□□ 1.5
AP000943.2-204ENST00000542479 NUP160Q12769 1436 aa24.41■■□□□ 1.5
AP000943.2-204ENST00000542479 IGF1RP08069 1367 aa24.4■■□□□ 1.5
AP000943.2-204ENST00000542479 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms