RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-218ENST00000542362 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
POLE-218ENST00000542362 CCDC180Q9P1Z9 1646 aa20■□□□□ 0.79
POLE-218ENST00000542362 ABCC9O60706 1549 aa19.58■□□□□ 0.73
POLE-218ENST00000542362 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
POLE-218ENST00000542362 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
POLE-218ENST00000542362 NACADO15069 1562 aa18.68■□□□□ 0.58
POLE-218ENST00000542362 UNC13AQ9UPW8 1703 aa18.68■□□□□ 0.58
POLE-218ENST00000542362 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
POLE-218ENST00000542362 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
POLE-218ENST00000542362 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
POLE-218ENST00000542362 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
POLE-218ENST00000542362 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
POLE-218ENST00000542362 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.52
POLE-218ENST00000542362 PABPN1Q86U42 306 aaKnown RBP eCLIP18.24■□□□□ 0.51
POLE-218ENST00000542362 SHROOM4Q9ULL8 1493 aa17.83■□□□□ 0.45
POLE-218ENST00000542362 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
POLE-218ENST00000542362 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
POLE-218ENST00000542362 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
POLE-218ENST00000542362 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
POLE-218ENST00000542362 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
POLE-218ENST00000542362 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
POLE-218ENST00000542362 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
POLE-218ENST00000542362 WIZO95785 1651 aa17.27■□□□□ 0.36
POLE-218ENST00000542362 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
POLE-218ENST00000542362 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
POLE-218ENST00000542362 NCAPD3P42695 1498 aa17.19■□□□□ 0.34
POLE-218ENST00000542362 HMGXB3Q12766 1538 aa17.19■□□□□ 0.34
POLE-218ENST00000542362 BAZ1BQ9UIG0 1483 aaKnown RBP17.13■□□□□ 0.33
POLE-218ENST00000542362 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
POLE-218ENST00000542362 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
POLE-218ENST00000542362 NESP48681 1621 aa17■□□□□ 0.31
POLE-218ENST00000542362 TOP2AP11388 1531 aaKnown RBP16.93■□□□□ 0.3
POLE-218ENST00000542362 KIF21AQ7Z4S6 1674 aa16.92■□□□□ 0.3
POLE-218ENST00000542362 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
POLE-218ENST00000542362 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
POLE-218ENST00000542362 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
POLE-218ENST00000542362 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.27
POLE-218ENST00000542362 CCDC88BA6NC98 1476 aa16.72■□□□□ 0.27
POLE-218ENST00000542362 CUX2O14529 1486 aa16.68■□□□□ 0.26
POLE-218ENST00000542362 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
POLE-218ENST00000542362 CFTRP13569 1480 aa16.63■□□□□ 0.25
POLE-218ENST00000542362 SUPT5HO00267 1087 aaKnown RBP16.62■□□□□ 0.25
POLE-218ENST00000542362 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.24
POLE-218ENST00000542362 FANCD2Q9BXW9 1451 aa16.58■□□□□ 0.24
POLE-218ENST00000542362 CEP164Q9UPV0 1460 aa16.55■□□□□ 0.24
POLE-218ENST00000542362 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
POLE-218ENST00000542362 WDR62O43379 1518 aa16.52■□□□□ 0.24
POLE-218ENST00000542362 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
POLE-218ENST00000542362 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
POLE-218ENST00000542362 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
POLE-218ENST00000542362 CUX1P39880 1505 aa16.28■□□□□ 0.2
POLE-218ENST00000542362 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
POLE-218ENST00000542362 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
POLE-218ENST00000542362 ZNF608Q9ULD9 1512 aaPredicted RBP16.23■□□□□ 0.19
POLE-218ENST00000542362 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
POLE-218ENST00000542362 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.19
POLE-218ENST00000542362 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.19
POLE-218ENST00000542362 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
POLE-218ENST00000542362 FGD5Q6ZNL6 1462 aa16.18■□□□□ 0.18
POLE-218ENST00000542362 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
POLE-218ENST00000542362 BIVM-ERCC5R4GMW8 1640 aa16.17■□□□□ 0.18
POLE-218ENST00000542362 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
POLE-218ENST00000542362 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
POLE-218ENST00000542362 CHD1O14646 1710 aa16.12■□□□□ 0.17
POLE-218ENST00000542362 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
POLE-218ENST00000542362 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
POLE-218ENST00000542362 AQRO60306 1485 aaKnown RBP eCLIP16.08■□□□□ 0.163e-8■■■■■ 31
POLE-218ENST00000542362 SOGA1O94964 1423 aa16.05■□□□□ 0.16
POLE-218ENST00000542362 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
POLE-218ENST00000542362 ABCA5Q8WWZ7 1642 aa16.03■□□□□ 0.16
POLE-218ENST00000542362 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
POLE-218ENST00000542362 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
POLE-218ENST00000542362 SNAPC4Q5SXM2 1469 aa15.95■□□□□ 0.14
POLE-218ENST00000542362 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
POLE-218ENST00000542362 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
POLE-218ENST00000542362 ADAMTS12P58397 1594 aa15.87■□□□□ 0.13
POLE-218ENST00000542362 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
POLE-218ENST00000542362 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.12
POLE-218ENST00000542362 RIMBP3CA6NJZ7 1639 aa15.83■□□□□ 0.12
POLE-218ENST00000542362 RIMBP3BA6NNM3 1639 aa15.83■□□□□ 0.12
POLE-218ENST00000542362 RIMBP3Q9UFD9 1639 aa15.83■□□□□ 0.12
POLE-218ENST00000542362 FBLN2P98095 1184 aa15.81■□□□□ 0.12
POLE-218ENST00000542362 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
POLE-218ENST00000542362 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
POLE-218ENST00000542362 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
POLE-218ENST00000542362 ERICH3Q5RHP9 1530 aa15.76■□□□□ 0.11
POLE-218ENST00000542362 RUSC2Q8N2Y8 1516 aa15.74■□□□□ 0.11
POLE-218ENST00000542362 ARHGEF11O15085 1522 aa15.73■□□□□ 0.11
POLE-218ENST00000542362 GRIN2AQ12879 1464 aa15.72■□□□□ 0.11
POLE-218ENST00000542362 CUL7Q14999 1698 aa15.7■□□□□ 0.1
POLE-218ENST00000542362 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
POLE-218ENST00000542362 ERCC6L2Q5T890 1561 aa15.68■□□□□ 0.1
POLE-218ENST00000542362 FHAD1B1AJZ9 1412 aa15.67■□□□□ 0.1
POLE-218ENST00000542362 KIF27Q86VH2 1401 aa15.65■□□□□ 0.1
POLE-218ENST00000542362 NUP160Q12769 1436 aa15.62■□□□□ 0.09
POLE-218ENST00000542362 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
POLE-218ENST00000542362 ARAP1Q96P48 1450 aa15.62■□□□□ 0.09
POLE-218ENST00000542362 IGF1RP08069 1367 aa15.62■□□□□ 0.09
POLE-218ENST00000542362 CTTNBP2Q8WZ74 1663 aa15.56■□□□□ 0.08
POLE-218ENST00000542362 CARMIL1Q5VZK9 1371 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms