RNA–Protein interactions for RNA: ENST00000542123.5

DDX47-207, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-207ENST00000542123 AEBP2Q6ZN18 517 aaPredicted RBP9.48□□□□□ -0.89
DDX47-207ENST00000542123 NISCHQ9Y2I1 1504 aa9.25□□□□□ -0.93
DDX47-207ENST00000542123 CHIC1Q5VXU3 224 aa9.04□□□□□ -0.96
DDX47-207ENST00000542123 ABCC9O60706 1549 aa8.83□□□□□ -1
DDX47-207ENST00000542123 POTEDQ86YR6 584 aa8.65□□□□□ -1.02
DDX47-207ENST00000542123 CCDC180Q9P1Z9 1646 aa8.62□□□□□ -1.03
DDX47-207ENST00000542123 DNAJC5BQ9UF47 199 aa8.52□□□□□ -1.05
DDX47-207ENST00000542123 SENP3Q9H4L4 574 aaPredicted RBP8.37□□□□□ -1.07
DDX47-207ENST00000542123 RB1CC1Q8TDY2 1594 aa8.36□□□□□ -1.07
DDX47-207ENST00000542123 DNAJC5Q9H3Z4 198 aa8.26□□□□□ -1.09
DDX47-207ENST00000542123 NACADO15069 1562 aa8.2□□□□□ -1.1
DDX47-207ENST00000542123 UNC13AQ9UPW8 1703 aa8.12□□□□□ -1.11
DDX47-207ENST00000542123 PHF23Q9BUL5 403 aaPredicted RBP8.08□□□□□ -1.12
DDX47-207ENST00000542123 PABPN1Q86U42 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
DDX47-207ENST00000542123 SHROOM4Q9ULL8 1493 aa8.06□□□□□ -1.12
DDX47-207ENST00000542123 CECR2Q9BXF3 1484 aa8.04□□□□□ -1.12
DDX47-207ENST00000542123 BICRAQ9NZM4 1560 aa8.02□□□□□ -1.13
DDX47-207ENST00000542123 CC2D2AQ9P2K1 1620 aa8.01□□□□□ -1.13
DDX47-207ENST00000542123 MYO15BQ96JP2 1530 aa7.97□□□□□ -1.13
DDX47-207ENST00000542123 CUX2O14529 1486 aa7.91□□□□□ -1.14
DDX47-207ENST00000542123 EIF4G1Q04637 1599 aaKnown RBP7.89□□□□□ -1.15
DDX47-207ENST00000542123 DCAF8L2P0C7V8 631 aa7.88□□□□□ -1.15
DDX47-207ENST00000542123 FOXD1Q16676 465 aa7.78□□□□□ -1.16
DDX47-207ENST00000542123 ERCC6Q03468 1493 aa7.73□□□□□ -1.17
DDX47-207ENST00000542123 MSH5O43196 834 aa7.71□□□□□ -1.17
DDX47-207ENST00000542123 DCAF1Q9Y4B6 1507 aa7.7□□□□□ -1.18
DDX47-207ENST00000542123 TRIM41Q8WV44 630 aa7.69□□□□□ -1.18
DDX47-207ENST00000542123 SCRIBQ14160 1630 aa7.69□□□□□ -1.18
DDX47-207ENST00000542123 ZCCHC6Q5VYS8 1495 aaKnown RBP7.59□□□□□ -1.2
DDX47-207ENST00000542123 THOC2Q8NI27 1593 aaKnown RBP7.55□□□□□ -1.2
DDX47-207ENST00000542123 NCAPD3P42695 1498 aa7.51□□□□□ -1.21
DDX47-207ENST00000542123 HMGXB3Q12766 1538 aa7.47□□□□□ -1.21
DDX47-207ENST00000542123 LAMC3Q9Y6N6 1575 aa7.47□□□□□ -1.21
DDX47-207ENST00000542123 BAZ1AQ9NRL2 1556 aaPredicted RBP7.46□□□□□ -1.22
DDX47-207ENST00000542123 SMARCA2P51531 1590 aa7.45□□□□□ -1.22
DDX47-207ENST00000542123 NESP48681 1621 aa7.43□□□□□ -1.22
DDX47-207ENST00000542123 KIF21AQ7Z4S6 1674 aa7.42□□□□□ -1.22
DDX47-207ENST00000542123 PDS5BQ9NTI5 1447 aa7.42□□□□□ -1.22
DDX47-207ENST00000542123 ATAD2BQ9ULI0 1458 aa7.4□□□□□ -1.22
DDX47-207ENST00000542123 OSCARQ8IYS5 282 aa7.4□□□□□ -1.23
DDX47-207ENST00000542123 MRC2Q9UBG0 1479 aa7.37□□□□□ -1.23
DDX47-207ENST00000542123 RIMBP3CA6NJZ7 1639 aa7.37□□□□□ -1.23
DDX47-207ENST00000542123 RIMBP3BA6NNM3 1639 aa7.37□□□□□ -1.23
DDX47-207ENST00000542123 RIMBP3Q9UFD9 1639 aa7.37□□□□□ -1.23
DDX47-207ENST00000542123 WDR62O43379 1518 aa7.36□□□□□ -1.23
DDX47-207ENST00000542123 BAZ1BQ9UIG0 1483 aaKnown RBP7.35□□□□□ -1.23
DDX47-207ENST00000542123 SMARCA4P51532 1647 aa7.33□□□□□ -1.24
DDX47-207ENST00000542123 PEG3Q9GZU2 1588 aa7.29□□□□□ -1.24
DDX47-207ENST00000542123 ARHGEF11O15085 1522 aa7.28□□□□□ -1.24
DDX47-207ENST00000542123 TRHP20396 242 aaPredicted RBP7.28□□□□□ -1.24
DDX47-207ENST00000542123 CEP164Q9UPV0 1460 aa7.25□□□□□ -1.25
DDX47-207ENST00000542123 CADPSQ9ULU8 1353 aa7.25□□□□□ -1.25
DDX47-207ENST00000542123 CYB5RLQ6IPT4 315 aa7.18□□□□□ -1.26
DDX47-207ENST00000542123 FANCD2Q9BXW9 1451 aa7.17□□□□□ -1.26
DDX47-207ENST00000542123 RSF1Q96T23 1441 aaPredicted RBP7.17□□□□□ -1.26
DDX47-207ENST00000542123 ARAP1Q96P48 1450 aa7.16□□□□□ -1.26
DDX47-207ENST00000542123 IFT140Q96RY7 1462 aa7.14□□□□□ -1.27
DDX47-207ENST00000542123 CHD1O14646 1710 aa7.12□□□□□ -1.27
DDX47-207ENST00000542123 PIAS4Q8N2W9 510 aaPredicted RBP7.12□□□□□ -1.27
DDX47-207ENST00000542123 PRDM2Q13029 1718 aa7.12□□□□□ -1.27
DDX47-207ENST00000542123 URB2Q14146 1524 aaKnown RBP7.11□□□□□ -1.27
DDX47-207ENST00000542123 ILDR1Q86SU0 546 aaPredicted RBP7.09□□□□□ -1.27
DDX47-207ENST00000542123 CFTRP13569 1480 aa7.08□□□□□ -1.28
DDX47-207ENST00000542123 EIF4G3O43432 1585 aaKnown RBP7.08□□□□□ -1.28
DDX47-207ENST00000542123 MROH2BQ7Z745 1585 aa7.07□□□□□ -1.28
DDX47-207ENST00000542123 ABCC8Q09428 1581 aa7.05□□□□□ -1.28
DDX47-207ENST00000542123 ZNF608Q9ULD9 1512 aaPredicted RBP7.05□□□□□ -1.28
DDX47-207ENST00000542123 SYNJ1O43426 1573 aa7.03□□□□□ -1.28
DDX47-207ENST00000542123 CLASP1Q7Z460 1538 aa7.02□□□□□ -1.29
DDX47-207ENST00000542123 WDR97A6NE52 1622 aa7.01□□□□□ -1.29
DDX47-207ENST00000542123 CACNB1Q02641 598 aaPredicted RBP7.01□□□□□ -1.29
DDX47-207ENST00000542123 TOPBP1Q92547 1522 aa6.99□□□□□ -1.29
DDX47-207ENST00000542123 WIZO95785 1651 aa6.99□□□□□ -1.29
DDX47-207ENST00000542123 DNMBPQ6XZF7 1577 aa6.98□□□□□ -1.29
DDX47-207ENST00000542123 FBLN2P98095 1184 aa6.98□□□□□ -1.29
DDX47-207ENST00000542123 ERCC6L2Q5T890 1561 aa6.97□□□□□ -1.29
DDX47-207ENST00000542123 TARBP1Q13395 1621 aaKnown RBP6.96□□□□□ -1.29
DDX47-207ENST00000542123 GAPVD1Q14C86 1478 aa6.95□□□□□ -1.3
DDX47-207ENST00000542123 MAGI1Q96QZ7 1491 aaPredicted RBP6.94□□□□□ -1.3
DDX47-207ENST00000542123 TOP2AP11388 1531 aaKnown RBP6.94□□□□□ -1.3
DDX47-207ENST00000542123 KIF13AQ9H1H9 1805 aa6.94□□□□□ -1.3
DDX47-207ENST00000542123 AQRO60306 1485 aaKnown RBP eCLIP6.93□□□□□ -1.34e-6■■■■□ 20.6
DDX47-207ENST00000542123 SNAPC4Q5SXM2 1469 aa6.91□□□□□ -1.3
DDX47-207ENST00000542123 CHMP7Q8WUX9 453 aaPredicted RBP6.91□□□□□ -1.3
DDX47-207ENST00000542123 SYNJ2O15056 1496 aa6.9□□□□□ -1.31
DDX47-207ENST00000542123 KDM6BO15054 1643 aa6.89□□□□□ -1.31
DDX47-207ENST00000542123 GRIN2BQ13224 1484 aa6.88□□□□□ -1.31
DDX47-207ENST00000542123 FBXO41Q8TF61 875 aa6.87□□□□□ -1.31
DDX47-207ENST00000542123 POLA1P09884 1462 aaPredicted RBP6.87□□□□□ -1.31
DDX47-207ENST00000542123 KDM4FA0A1W2PPD8 638 aa6.86□□□□□ -1.31
DDX47-207ENST00000542123 PBRM1Q86U86 1689 aa6.85□□□□□ -1.31
DDX47-207ENST00000542123 HECW2Q9P2P5 1572 aa6.84□□□□□ -1.31
DDX47-207ENST00000542123 SOGA1O94964 1423 aa6.84□□□□□ -1.31
DDX47-207ENST00000542123 ABCC10Q5T3U5 1492 aa6.83□□□□□ -1.32
DDX47-207ENST00000542123 TDRD9Q8NDG6 1382 aaKnown RBP6.82□□□□□ -1.32
DDX47-207ENST00000542123 MAPKBP1O60336 1514 aa6.81□□□□□ -1.32
DDX47-207ENST00000542123 CEP170Q5SW79 1584 aa6.81□□□□□ -1.32
DDX47-207ENST00000542123 DIP2BQ9P265 1576 aa6.81□□□□□ -1.32
DDX47-207ENST00000542123 SHROOM2Q13796 1616 aa6.81□□□□□ -1.32
DDX47-207ENST00000542123 LMTK3Q96Q04 1460 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms