RNA–Protein interactions for RNA: ENST00000541315.1

BCKDHA-205, Transcript of branched chain keto acid dehydrogenase E1, alpha polypeptide, humanhuman

TSL 3

Gene BCKDHA, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHA-205ENST00000541315 NISCHQ9Y2I1 1504 aa33.72■■■□□ 2.99
BCKDHA-205ENST00000541315 ABCC9O60706 1549 aa30.64■■■□□ 2.5
BCKDHA-205ENST00000541315 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.43
BCKDHA-205ENST00000541315 DNAJC5BQ9UF47 199 aa29.29■■■□□ 2.28
BCKDHA-205ENST00000541315 RB1CC1Q8TDY2 1594 aa29■■■□□ 2.23
BCKDHA-205ENST00000541315 NACADO15069 1562 aa28.65■■■□□ 2.18
BCKDHA-205ENST00000541315 UNC13AQ9UPW8 1703 aa28.38■■■□□ 2.13
BCKDHA-205ENST00000541315 PABPN1Q86U42 306 aaKnown RBP eCLIP28.32■■■□□ 2.12
BCKDHA-205ENST00000541315 ZCCHC6Q5VYS8 1495 aaKnown RBP28.32■■■□□ 2.12
BCKDHA-205ENST00000541315 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
BCKDHA-205ENST00000541315 BICRAQ9NZM4 1560 aa28.17■■■□□ 2.1
BCKDHA-205ENST00000541315 MYO15BQ96JP2 1530 aa28.09■■■□□ 2.09
BCKDHA-205ENST00000541315 DCAF1Q9Y4B6 1507 aa28.02■■■□□ 2.08
BCKDHA-205ENST00000541315 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
BCKDHA-205ENST00000541315 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
BCKDHA-205ENST00000541315 CECR2Q9BXF3 1484 aa27.72■■■□□ 2.03
BCKDHA-205ENST00000541315 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
BCKDHA-205ENST00000541315 DNAJC5Q9H3Z4 198 aa27.46■■□□□ 1.99
BCKDHA-205ENST00000541315 SCRIBQ14160 1630 aa27.32■■□□□ 1.96
BCKDHA-205ENST00000541315 CUX2O14529 1486 aa26.81■■□□□ 1.88
BCKDHA-205ENST00000541315 ERCC6Q03468 1493 aa26.53■■□□□ 1.84
BCKDHA-205ENST00000541315 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
BCKDHA-205ENST00000541315 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
BCKDHA-205ENST00000541315 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
BCKDHA-205ENST00000541315 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
BCKDHA-205ENST00000541315 SMARCA2P51531 1590 aa26.16■■□□□ 1.78
BCKDHA-205ENST00000541315 NESP48681 1621 aa26.14■■□□□ 1.77
BCKDHA-205ENST00000541315 THOC2Q8NI27 1593 aaKnown RBP26.13■■□□□ 1.77
BCKDHA-205ENST00000541315 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
BCKDHA-205ENST00000541315 RSF1Q96T23 1441 aaPredicted RBP26.07■■□□□ 1.76
BCKDHA-205ENST00000541315 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
BCKDHA-205ENST00000541315 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
BCKDHA-205ENST00000541315 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.75
BCKDHA-205ENST00000541315 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
BCKDHA-205ENST00000541315 KIF21AQ7Z4S6 1674 aa25.88■■□□□ 1.73
BCKDHA-205ENST00000541315 PEG3Q9GZU2 1588 aa25.87■■□□□ 1.73
BCKDHA-205ENST00000541315 TRIM41Q8WV44 630 aa25.86■■□□□ 1.73
BCKDHA-205ENST00000541315 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
BCKDHA-205ENST00000541315 WIZO95785 1651 aa25.71■■□□□ 1.71
BCKDHA-205ENST00000541315 WDR62O43379 1518 aa25.62■■□□□ 1.69
BCKDHA-205ENST00000541315 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
BCKDHA-205ENST00000541315 TOP2AP11388 1531 aaKnown RBP25.6■■□□□ 1.69
BCKDHA-205ENST00000541315 CADPSQ9ULU8 1353 aa25.53■■□□□ 1.68
BCKDHA-205ENST00000541315 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
BCKDHA-205ENST00000541315 OSCARQ8IYS5 282 aa25.34■■□□□ 1.65
BCKDHA-205ENST00000541315 FANCD2Q9BXW9 1451 aa25.25■■□□□ 1.63
BCKDHA-205ENST00000541315 CCDC88BA6NC98 1476 aa25.24■■□□□ 1.63
BCKDHA-205ENST00000541315 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
BCKDHA-205ENST00000541315 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
BCKDHA-205ENST00000541315 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
BCKDHA-205ENST00000541315 CFTRP13569 1480 aa25.14■■□□□ 1.61
BCKDHA-205ENST00000541315 URB2Q14146 1524 aaKnown RBP25.09■■□□□ 1.61
BCKDHA-205ENST00000541315 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
BCKDHA-205ENST00000541315 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
BCKDHA-205ENST00000541315 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
BCKDHA-205ENST00000541315 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
BCKDHA-205ENST00000541315 ZNF608Q9ULD9 1512 aaPredicted RBP24.86■■□□□ 1.57
BCKDHA-205ENST00000541315 EIF4G3O43432 1585 aaKnown RBP24.78■■□□□ 1.56
BCKDHA-205ENST00000541315 CYB5RLQ6IPT4 315 aa24.75■■□□□ 1.55
BCKDHA-205ENST00000541315 CHD1O14646 1710 aa24.72■■□□□ 1.55
BCKDHA-205ENST00000541315 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
BCKDHA-205ENST00000541315 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
BCKDHA-205ENST00000541315 TRHP20396 242 aaPredicted RBP24.68■■□□□ 1.54
BCKDHA-205ENST00000541315 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
BCKDHA-205ENST00000541315 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
BCKDHA-205ENST00000541315 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
BCKDHA-205ENST00000541315 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
BCKDHA-205ENST00000541315 AQRO60306 1485 aaKnown RBP eCLIP24.52■■□□□ 1.52
BCKDHA-205ENST00000541315 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
BCKDHA-205ENST00000541315 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
BCKDHA-205ENST00000541315 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
BCKDHA-205ENST00000541315 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
BCKDHA-205ENST00000541315 FBLN2P98095 1184 aa24.41■■□□□ 1.5
BCKDHA-205ENST00000541315 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
BCKDHA-205ENST00000541315 SYNJ1O43426 1573 aa24.4■■□□□ 1.5
BCKDHA-205ENST00000541315 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
BCKDHA-205ENST00000541315 EEA1Q15075 1411 aa24.37■■□□□ 1.49
BCKDHA-205ENST00000541315 CUX1P39880 1505 aa24.3■■□□□ 1.48
BCKDHA-205ENST00000541315 SNAPC4Q5SXM2 1469 aa24.3■■□□□ 1.48
BCKDHA-205ENST00000541315 MAGI1Q96QZ7 1491 aaPredicted RBP24.27■■□□□ 1.48
BCKDHA-205ENST00000541315 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
BCKDHA-205ENST00000541315 SOGA1O94964 1423 aa24.27■■□□□ 1.48
BCKDHA-205ENST00000541315 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
BCKDHA-205ENST00000541315 CHMP7Q8WUX9 453 aaPredicted RBP24.19■■□□□ 1.46
BCKDHA-205ENST00000541315 FAM9AQ8IZU1 332 aaPredicted RBP24.18■■□□□ 1.46
BCKDHA-205ENST00000541315 SYNJ2O15056 1496 aa24.18■■□□□ 1.46
BCKDHA-205ENST00000541315 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
BCKDHA-205ENST00000541315 GAPVD1Q14C86 1478 aa24.16■■□□□ 1.46
BCKDHA-205ENST00000541315 FGD5Q6ZNL6 1462 aa24.15■■□□□ 1.46
BCKDHA-205ENST00000541315 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
BCKDHA-205ENST00000541315 CSRNP3Q8WYN3 585 aa24.09■■□□□ 1.45
BCKDHA-205ENST00000541315 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
BCKDHA-205ENST00000541315 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
BCKDHA-205ENST00000541315 RUSC2Q8N2Y8 1516 aa23.98■■□□□ 1.43
BCKDHA-205ENST00000541315 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
BCKDHA-205ENST00000541315 KIF21BO75037 1637 aa23.94■■□□□ 1.42
BCKDHA-205ENST00000541315 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
BCKDHA-205ENST00000541315 GOLGA3Q08378 1498 aa23.93■■□□□ 1.42
BCKDHA-205ENST00000541315 ERCC6L2Q5T890 1561 aa23.92■■□□□ 1.42
BCKDHA-205ENST00000541315 KIF13AQ9H1H9 1805 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms